Labeo rohita (rohu): 127151790
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Entry
127151790 CDS
T09007
Symbol
psmc1b
Name
(RefSeq) proteasome 26S subunit, ATPase 1b
KO
K03062
26S proteasome regulatory subunit T2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
127151790 (psmc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lroh03051
]
127151790 (psmc1b)
Proteasome [BR:
lroh03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
127151790 (psmc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_25
AAA_28
AAA_14
AAA_3
RNA_helicase
IstB_IS21
AAA_11
TIP49
AAA_18
ATPase
Mg_chelatase
Prot_ATP_ID_OB_N
AAA_33
Parvo_NS1
NB-ARC
AAA_7
PhoH
AAA_24
NACHT
AAA_30
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
127151790
NCBI-ProteinID:
XP_050948073
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All DBs
Position
20:complement(7739629..7745495)
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKKKRKSKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVAEDVNLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagagtcaaagcggaggacatggaccgggaggtggaaagaaagatgataaggac
aagaagaagaaatatgagccgcccattccaactagagtgggcaagaagaagaggaagtcc
aagggccctgatgctgccagcaaactgcctttagtcacccctcacacacagtgcaggctg
aagctcctgaagcaagagagaattaaagattacctgctgatggaagaggagttcatcagg
aaccaggagcagatgaaaccactagaggagaaacaggaggaggagaggtcaaaggtcgat
gatctgagggggactcctatgtctgtggggaccctggaggagatcattgatgacaatcat
gccatcgtctccacgtctgtgggctcggagcactacgtcagcattctgtcatttgtcgac
aaagatctgctggagcctggctgctctgtcttactcaatcacaaggtccatgccgtcata
ggggttttgatggatgacacagaccctcttgttacagtcatgaaggtggaaaaggctcca
caagagacatatgctgacatcggtggactggacagtcagatacaagaaattaaggagtcc
gtggagctgccgctgacccatccagagtattatgaggaaatggggatcaagcctcccaaa
ggggtcattctctacggcccacctggaacaggtaaaacccttcttgccaaggcggtggcc
aatcagacgtctgcaacgtttttacgagtcgttggttcagagctgattcagaagtatctc
ggcgacggccctaaactagtacgtgagctcttcagggtggcagaggaacatgctccatct
attgtctttatcgatgagattgacgccattggaacgaaaagatacgactcaaactcagga
ggtgaacgtgaaattcagagaaccatgttggagctcctcaatcagctggatggctttgat
tcacgtggtgatgtgaaggtcattatggccaccaacagaatagagacccttgaccctgct
ctgattagaccaggtcgcatcgaccgtaagattgaattcccgttaccagatgagaaaact
aagagaaggatcttccagatccacaccagcagaatgactgtggctgaggatgtaaacttg
gacgacctcatcctggctaaagacgacctttcaggagctgatattaaggccatctgtaca
gaagcaggtctcatggccctcagagaacgtaggatgaaggtcaccaatgaggacttcaag
aagtccaaagaaaatgttttgtataaaaagcaggagggcactcctgaaggcctctatctt
taa
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