Labeo rohita (rohu): 127152442
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Entry
127152442 CDS
T09007
Symbol
adamts2a
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 2 isoform X1
KO
K08618
a disintegrin and metalloproteinase with thrombospondin motifs 2 [EC:
3.4.24.14
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127152442 (adamts2a)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.14 procollagen N-endopeptidase
127152442 (adamts2a)
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
127152442 (adamts2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
Pep_M12B_propep
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
Reprolysin_5
Reprolysin_2
Reprolysin_3
ADAMTS_CR_3
Reprolysin_4
TSP1_spondin
PLAC
Peptidase_M10
DUF4953
Motif
Other DBs
NCBI-GeneID:
127152442
NCBI-ProteinID:
XP_050949054
LinkDB
All DBs
Position
21:9901303..9970760
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AA seq
1330 aa
AA seq
DB search
MDVTPGCAFFIIFLHFQHADTLYIANSIDSLQHVLREYGLVRPVSVDADGRFLSHAISAS
RLSGQGSHRRRRRQANQYGETNEETNSEQDHLRHKETLFYNVTVFGQEFHLRLRLNSRLV
APGAKVEWLEDDNQTHSEPLLPSDCLYVGYVTNVKDTSVAISNCDGLAGMIRAGQEEFFI
EPLERGGDMTGEEEGGPGRHHIVYRSSDIKKPAVSQPTDFHPRGSPLGLQAGLEYLPHHV
KKKIKSNTRTRRETYEDEIFNIEVLLGVDCSVVMFHGREHIQKYLLTLMNIVNEIYQDST
LGAHINVVLVRIMMLCSSKSMGLIELGNASQSLENVCRWAFLQQKEDKNDAEYHDHAIFL
TRQEFGPTGMQGYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGMEHDGQANECG
DEVPMGSIMAPLVQAAFHRFHWSRCSQQELRRYLNTYDCLRDDPFDHEWPTLPQLPGLHY
SMNDQCRFDFGMGYMMCTAVSYSTYDPCKQLWCSHPENPFFCKTKKGPPIDGTKCETGKH
CFKGHCIKLTPDILRQDGHWGQWTKFGSCSRTCGGGVQFRTRECNNPIPANGGRTCYGNN
YEFQLCNMEECAKALADFREEQCKMWNPHFEHEDTKHHWLPYEHSEPDERCQLYCQSKET
GDVVSMKRMVHDGTRCSYKDPYSVCVRGECEKVGCDNVIASELEDDKCGVCGGDNSTCKI
VKGNFTRSTRKPGFLKILEIPKGARHIQIREFKGTPHILAVKNQATDHIFLNDEGDFPES
RTVIEKGVAWEYSNNDDMETVQTTGPLKYGVLIMVQSQSISKVTLSYKYILPEDPLSSME
NALPQDDTVYFEWALRKWSHCSKPCGGGKQYTRFGCRRKSDGKMVHRTLCANIPKPRAIS
RACNQKECSEPIWVTGEWDECSKSCGKTGSQVRPVRCVRPELDGSYKAINAKYCNDDRPE
GRRPCNRHLCPAQWRTGPWSQCSVTCGNGTQERQVMCSTADNAIGICMDTKPESIKSCLL
APCPNDRGNFLIQWLSRADPEFPAPKISSRFRCKGDKSVFCRMEVLNKYCSNPGYRQMCC
KSCSEVNYTSEFNLTRPWMYTTVFPPVSPTATAPVRTTHLYRTSQKPGTSITPTVSRWRN
ISTEPTAWGYTTTVNPLTLKPGTTVPFTTGSVPVHSKDPSTFDYEEETSAPFYEDETWSE
VSSELFSESESSEFISSSAEPWPTTPQYTSTPENNNIETTFLTTIQPKVTATTSPPAIIS
LDQSEDKKENNSIDVSYRIVNPNEVTLNHFVPRKRVPFREKTHNKRIQELLAEKRRQDFL
LQRLKRKPGD
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggatgttactcctggatgtgcattcttcattattttccttcactttcagcacgcggat
actctttacatcgccaacagtatagattccctgcagcatgtcctgagggaatacgggcta
gtgaggccggtgagcgtggatgcagacggacgcttcctctcccacgccatctctgccagc
cggttgagtgggcaggggtcccaccggcgcaggaggaggcaggccaaccagtatggagag
accaatgaggagacgaactcagagcaggaccacctgaggcacaaggagacactcttttat
aatgtcactgttttcgggcaggagtttcaccttcgcctcaggctaaattccaggctcgtg
gcccctggagccaaagtggagtggcttgaggatgataaccaaacacattctgagccattg
ttgcccagtgactgtttatatgtgggttatgttaccaatgtgaaggatacatcggtggct
atcagcaattgcgatggcctggcggggatgatccgtgcaggtcaagaggagttttttatc
gagccgctggagagaggaggcgacatgacaggagaggaggaaggaggacctgggcgtcat
cacatcgtctaccgctcctctgacatcaagaagccggccgtcagtcagcccactgacttt
caccccagaggttctcctctgggtcttcaggctggattagaatatttaccccaccatgtt
aagaagaaaataaagagcaacacgcgaacacgcagagagacgtatgaagatgagatcttt
aacatcgaggttctcttgggagtggactgctctgtggtgatgtttcacggcagagagcac
atccagaagtacctcctaaccctcatgaatattgtgaatgagatttatcaggacagcacc
ctgggtgcccatattaatgttgtcctggttagaatcatgatgctctgctcctccaagtcc
atgggtttgattgaactgggcaacgcttctcagagtctggagaacgtctgccgctgggcc
ttcctgcagcaaaaagaggataaaaatgatgcagaataccatgatcatgccattttcctc
accagacaagagtttgggcccactggcatgcaaggttatgctcctgtgacgggaatgtgt
catcctgtgagaagttgcactctgaaccatgaggatggcttctcgtctgcttttgttgtg
gcccatgagacaggacatgtgctggggatggagcatgatggccaggcaaatgagtgtggg
gatgaggttccaatgggcagtataatggctcctctggttcaagcagccttccaccgcttt
cattggtcccgatgcagtcaacaggaactcaggcgatacctcaatacatatgactgtctg
cgtgacgaccccttcgatcatgagtggccaactctgccccagctgcctggtctgcattac
tctatgaacgaccaatgccgctttgactttggcatgggctacatgatgtgcactgcggtg
agttacagcacctacgatccttgcaagcagctgtggtgcagccaccccgagaaccctttc
ttctgcaagaccaaaaagggccctcctattgatgggaccaagtgtgagacaggaaagcac
tgttttaagggccactgtatcaagctgacgccagacattcttaggcaggatggtcactgg
ggtcagtggaccaagttcggttcctgctctcgtacctgtggtggtggagtacagttccga
actcgagagtgcaacaacccaattccagccaacggggggcgcacttgttatggaaacaac
tatgagttccagctctgtaacatggaggagtgtgcaaaggccctggctgactttagagag
gagcagtgcaaaatgtggaacccccacttcgagcatgaggacaccaaacatcattggctg
ccctacgagcactctgaacctgatgagagatgtcaactatactgccagtcaaaagaaacc
ggcgacgtggtgtccatgaagagaatggtgcatgatggcacacgttgttcctacaaagac
ccttacagcgtgtgtgtgcgtggggagtgtgagaaagtgggctgtgacaatgttatagcc
tcagagctagaggacgataagtgtggcgtgtgtggaggagacaactctacctgcaagatt
gtcaaaggaaatttcacccgcagcacaaggaaaccaggttttctgaagattttggagatt
cctaaaggagcacgccacattcagatccgtgaattcaaaggaacaccacatattctagcg
gtgaagaaccaggccacggatcatatcttcctgaacgacgagggtgattttcctgagtca
cgtacagtaattgagaaaggtgtggcgtgggagtacagtaacaatgatgacatggagacg
gtccagaccaccggaccactcaaatatggagttctcattatggttcagtctcagagcatt
tctaaagtcacgctttcatacaaatacatcctgccagaagatccgctctcatcaatggag
aacgccctgcctcaggacgacacagtttacttcgagtgggctctcaggaagtggtcgcac
tgttccaagccatgtggtggagggaaacagtacacacgctttggatgccggaggaagtct
gatggcaaaatggtacaccgcacactctgcgctaacatacccaaacctcgtgccatcagt
cgagcctgcaaccagaaggagtgctcagaaccaatctgggtgacaggagaatgggatgag
tgcagtaaatcatgtggtaagactggttctcaagtccgacctgtgcgctgtgtgagacct
gaattggacggttcatacaaagccatcaacgctaagtactgcaatgacgaccggcccgaa
gggcgacgaccctgtaatcgtcacctgtgcccggcacagtggagaactggaccttggtct
cagtgctcagtgacctgtggcaatgggactcaggagcgacaggttatgtgcagcaccgct
gataatgccatcggcatctgtatggacaccaagcctgagagcatcaagtcatgtctgctt
gcgccatgtccaaatgacagagggaacttcctcatccagtggctgtccagagcagacccc
gagttcccagcgcccaagatctcctcaagatttcgctgtaaaggagacaagtctgtgttc
tgtcggatggaggttctcaataagtactgctccaaccccggctacaggcagatgtgctgc
aagtcctgcagcgaggtcaactacacctctgaattcaacctgactagaccctggatgtac
accactgtcttcccaccagtgtctcccactgcaacagctcccgttcgcacaacacatctg
tacaggacctcacagaagcccggcacaagcatcacaccaacagtcagcagatggagaaac
atcagcactgagcccacagcttggggctacacaaccactgtgaacccactaaccctaaaa
ccaggaaccacagtccctttcaccactggttctgtccctgtgcactctaaggatcccagc
acatttgactacgaagaggaaaccagcgcccccttctacgaggacgaaacctggagtgaa
gtctcaagcgaactcttctcagaatccgaatcatcagagttcatctcatcatctgctgag
ccttggccaaccactccacaatatacaagcacacctgagaataacaacattgagacaaca
tttctgacaacaatacagcctaaggttactgcaacaacaagccctcctgccataatcagt
ctcgatcagtcagaagacaagaaggagaataactccatcgacgtgtcctacaggattgtc
aatccaaacgaggtcacactcaaccactttgtccccagaaagcgagtgccgttccgtgag
aaaacacataataaaagaattcaagagctccttgcggagaaaagacgacaagacttcctg
cttcaaagactgaaacgaaaaccaggagactga
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