Labeo rohita (rohu): 127152963
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Entry
127152963 CDS
T09007
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127152963 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127152963 (cnot8)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127152963 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127152963 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
127152963
NCBI-ProteinID:
XP_050949830
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All DBs
Position
21:7158834..7166830
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AA seq
285 aa
AA seq
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MPAALADTSQIICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDSRLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSSQSQNGISNSSQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcacttgcagataccagtcagattatctgtgaggtctgggccagcaatgtg
gaggaagagatgaggaagataagacagataattcaaaattacaactacattgccatggac
acagagtttcccggtgtggtggttcgtcccattggagagttccgtagtactgttgactac
cagtaccagcttctgaggtgtaatgtggaccttttaaaaatcatccagctgggcttgaca
tttatgaatgaagatggagactacccgcctggaaccacaacatggcagtttaactttaag
tttaatctaacagaggatatgtactcacaggattccatagatctccttcagaactctggg
ctacagtttaaaaagcatgaagaggagggcatcgacacactctactttgcagagctcctg
atgacatcaggtcttgtgctttgtgaaaatgtcaagtggctctcatttcacagtgggtat
gattttggttacctggtgaagctgctcacagattcccggctgccagaagaggaacatgaa
ttctttcagattttaaacctttttttcccagccatttatgacgtcaaatatcttatgaag
agctgcaaaaaccttaagggtggacttcaggaggtggcggaccagctggagctaaaaagg
atcggcaggcagcatcaggctggctcagactcactgctcactggaatggctttcttccgc
atgaaagagttgttttttgaagacaacattgacgatgccaagtactgcgggcggctctat
ggcctgggatccggttcctctcaaagtcagaatggaatctctaactcctcgcaggaggaa
accaacaacaagcactga
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