Labeo rohita (rohu): 127158542
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Entry
127158542 CDS
T09007
Name
(RefSeq) tripartite motif-containing protein 16 isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127158542
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127158542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
U-box
zf-RING_5
AKNA
Motif
Other DBs
NCBI-GeneID:
127158542
NCBI-ProteinID:
XP_050957580
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MCSKMAEANISVTQDQFSCSICLDLLKDPVTIPCGHSYCMNCITDCWNQDDQKGIYSCPQ
CRQTFTPRPVINKNVVFAEMVEKLKKTKTQTARPTLSYAGPGDVECDVCTGRKYKAVRSC
LMCLNSYCQNHLEQHDSFFKDKKHNLINATGRLKEMICSKHNRLLEVYCRTDQRCVCLLC
TMNEHKIHTTVSVKAERTVKQKELLDIQRKLQKRIQGREKMLQELKEAVKTHKLSAQAAV
EDSERIFTELIRSIERSRSEVVEMIRDQEKAEVNRAERLLKQLQQEIDNLKRRDAELKPL
SQTDNHIHFLQSFQSLSVPPASTKSINVSSLLTYDDVGKSVSMLREKLEDFCKEEIKKIS
GRVTYMEIVSIPEPGSRDEFLHYSRQLTLDPNTAHKYLCLSESNKVATFIGADQQYPVHP
DRFHDFSQVLCRESVCGRCYWEVEWSGGVGISVSYKSISRKGEGDCVFGFNDQSWRFCCS
GSSYAFRHNNKTTSLSVPSSICRIGVYVDHRAGILSFYSVSGTMTLIHKVQTTFTQPLYP
GFGINLGSTVKLLS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtaaaatggcagaagccaatatttcagtgactcaggatcagttcagctgttcg
atctgtctggacctactaaaggatccagtgaccattccctgtggacacagttactgtatg
aactgcatcacagactgctggaatcaagatgatcagaagggaatttacagctgccctcag
tgcagacagaccttcactccaagacctgttataaacaagaatgtggtgtttgcagaaatg
gtggagaaacttaagaagacaaaaacccaaacagctcgtcctactctcagttatgctgga
cctggagatgtggagtgtgacgtctgcactgggagaaaatacaaagctgtcaggtcctgt
ctgatgtgtctgaactcttactgtcaaaatcaccttgaacaacatgacagtttttttaaa
gataagaaacacaatttgattaacgccactggacgactcaaggagatgatctgctcaaaa
cataacagactgctagaggtttattgtcgtactgaccagcgatgtgtttgtttgttgtgc
acaatgaatgaacacaaaattcacaccactgtttcagtgaaagcagagaggactgtgaaa
cagaaagagttgttagacattcaaagaaagctccagaaaagaatccagggaagagagaag
atgcttcaagagctcaaagaggctgtgaagactcataagctctctgcacaggcagcagtg
gaggacagtgagaggatctttactgaactaatccgctccattgagagaagccgctcggag
gtggtggagatgatcagagatcaggaaaaggctgaagtgaatcgagctgaaagactcttg
aagcagctgcagcaggagattgataatctgaagaggagagatgctgagctgaagccacta
tcacaaacagacaatcacatccatttcctacagagttttcagtctctctctgttcctcct
gcatccacaaaaagcatcaatgtcagttctctcctcacttatgatgatgttggtaaatct
gtctctatgctaagagagaaacttgaggacttctgcaaagaggagataaaaaagatatct
ggtagagtgacatacatggagattgtttccatccctgaacccggatccagagatgagttt
ttgcactattcccgtcagctcaccctggatccaaacactgcacataaatatctctgtctg
tctgaaagcaacaaagtggctacatttattggggctgaccagcagtatcctgttcatcca
gaccgatttcatgatttttctcaggtgttgtgtagagagagtgtgtgtggacgctgttac
tgggaggtggagtggagtggtggtgtgggaatttcagtgtcgtataagagcattagtagg
aagggagaaggtgattgtgtatttggatttaatgatcagtcatggagattttgctgctct
ggctctagttatgcattcaggcacaataacaaaacaactagtctctctgtaccatccagt
atctgtagaataggagtgtacgtggatcacagagcaggaattctgtccttctacagcgtc
tctggcacaatgaccctcatccacaaagtccagaccacattcactcaaccgctctatcct
gggtttgggataaatttaggatcaacagtgaaactgttgtcttaa
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