Labeo rohita (rohu): 127159972
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Entry
127159972 CDS
T09007
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127159972 (rbfox1)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127159972 (rbfox1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
127159972
NCBI-ProteinID:
XP_050958607
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All DBs
Position
3:22126050..22450532
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AA seq
394 aa
AA seq
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MQHPLTGGTCVALPNVDMCPQLSCALTFMYLQQGNQDAPAPPETMAQPYPSAQFAPPQNG
IPAEYTPSHPHPTPDYPGQTPVAEHTLNMYPPAQTHSEPSGPDNSVQAVSGTATQTDDSA
QTDSQQQTQSSENTENKTQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSK
GFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYANGWKLNPVVG
AVYSPEFYAVPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPHIPAYGGVVYQDG
FYGADIYGGYAAYRYTQPATATAAAYSDSYGRVYAADPYNHALAPAATYSVGAMNAFAPL
TDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcccttgacgggcggaacgtgcgtcgccctgccgaacgtggacatgtgtccg
cagctctcctgtgccttgactttcatgtacttacagcagggtaatcaagacgccccagca
cccccagaaaccatggcccagccttacccgtcggcccagttcgctccccctcagaacggc
attcctgctgagtacacgccgtcccaccctcacccgactccagactacccgggccagacc
cccgtggcagagcacacgctgaacatgtacccccctgcccagacgcacagtgagcccagc
ggaccagacaacagcgtacaggcggtctccggcacagccacacagacagacgattcagca
cagacagacagccaacagcaaacacagtcatctgaaaacacagaaaacaaaacgcagccc
aagaggctccacgtctccaacatccccttcaggttcagagatccagacctcaggcaaatg
tttggccaatttggtaaaatcttagatgttgaaatcatatttaatgaacgaggatcaaag
ggttttggtttcgtaactttcgaaaatagtgccgatgcggacagggccagagagaaatta
cacggcacggtggtagaaggtcgtaaaatagaggttaacaatgcaacagcacgggtaatg
acgaataaaaagaccgtcaacccatatgcaaacggctggaagttgaatccagtcgtgggt
gcagtctacagcccagaattctatgcagtgccaggcttcccatacccagcagccacggcg
gcggcggcgtacagaggggcacacttaagaggaagagggcgcaccgtctacaatacattc
cgggcagctgcgcctcccccacatatcccagcctatgggggtgttgtttaccaggacgga
ttttatggtgcagatatttatggtggttacgctgcctaccgatacactcagcctgctact
gctaccgccgctgcctacagtgacagttacggacgagtttatgctgccgacccctacaac
cacgcacttgctccagcagccacatacagcgttggtgccatgaatgctttcgctcccttg
actgatgccaagaccagaagccacgccgacgatgtgggtctcgttctttcttctttgcag
gctagtatataccgaggtggatacagtcgtttcgcgccatactaa
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