Labeo rohita (rohu): 127160385
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Entry
127160385 CDS
T09007
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127160385
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127160385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
zf-RING_5
DUF4407
DUF5446
Motif
Other DBs
NCBI-GeneID:
127160385
NCBI-ProteinID:
XP_050958985
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MAEASVFSLEQFICPVCLDLLKDPVTIPCGHSYCMSCITDCWDQEDQKRVYSCPQCRKTF
SPRPALSKNTMLAEVVEKLKKTKLKAAVPAGSGDVECDICTGRKHKAVKSCLVCLESYCQ
THFERHEEFRSGKRHKVTDATGRLQQMICHQHDKLLEVFCRTDQQCVCMLCAMDEHKNHE
TVSTAAERTEKEKHLKETQSEIQQRIQQRQKDLEQLRAAVESHKRSAQTAVEDSERIFTE
LIRSIERSRSEVTQRIRDQEKAAVSRAEEQMERLEQEIDDLKRRNTELEQLSHTDDHIHF
LQSVLSLSAPPESTENISVSFLFSFDGVRESVSQLRHKLEDFCKELMKKISDTQSNIVPR
IKEDFLQYSHQFTLDVNTVHKLLSLSNWKEEVFFTSKLQPYPDHPDRFDVYPQVLCRESV
SGCCYWEVEWGGNGRSGGVNISVSYKSISRKGSGYECFFGYNDQSWSLFCSDRSFSFWHN
NKETKLPVPSSCGRIGVYVDHSAGTLSFYSVSDTMNLIHTVQTTFTQPLYPGFNVWGSMN
LPDLQL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctagtgttttttcattggagcagttcatctgtccagtgtgtctggatctc
ctgaaggatccagtgaccattccctgtggacacagttactgtatgagctgcattacagac
tgctgggatcaagaggatcagaagagagtctacagctgccctcagtgcagaaagaccttc
agtccaagacctgccttaagtaaaaacaccatgctggctgaagtggtggagaaactgaag
aagaccaaactaaaagctgctgttcctgctggatctggagacgtggagtgtgacatctgt
actggaagaaaacacaaagctgtcaagtcctgtctggtgtgtctggagtcttactgtcaa
actcattttgagcgtcatgaagagtttcgctcaggaaagcgacacaaagtgactgatgcc
actggacgactgcagcagatgatctgccatcaacatgataaacttctggaggttttctgt
cgtactgaccagcaatgtgtttgtatgttgtgtgcaatggatgaacataaaaaccatgag
actgtatcaactgcagcagagaggacagagaaagagaaacacttgaaggagacacagagt
gaaatccagcagagaatccagcagagacagaaagatcttgagcagctgagagcggctgtg
gagtctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgag
ctcatccgctccattgagagaagccgctctgaggtgacacagcggatcagagatcaggaa
aaggctgcagtgagtcgagctgaagaacaaatggagcgactggagcaggagattgatgat
ctgaagaggagaaacactgagctggagcagctttcacacacagatgatcacatccatttc
ctccagagtgttctgtctctctcagctcctcctgaatctacagaaaacatcagtgtcagt
tttctcttttcttttgatggtgtgagagaatctgtcagtcagctgagacacaaactggag
gatttctgcaaagaactgatgaaaaagatatctgacactcagagtaacattgttcccaga
atcaaagaggacttcctacaatattcccatcagttcacgctggatgtaaacactgtgcat
aaactcctcagtctctctaattggaaggaagaggtgtttttcactagcaaactccagccg
tatcctgatcatccagacagatttgatgtttatcctcaggtgttgtgtagagagagtgtg
agtggatgctgttactgggaggttgagtggggtgggaatggaaggagtggtggtgtaaat
atatcagtgtcatataagagcatcagccggaagggatctggttatgagtgtttctttgga
tataatgatcagtcctggagtttattctgctctgaccgcagtttctcattctggcacaat
aacaaagagactaaactccctgttccctccagctgcggtagaataggagtgtatgtggat
cacagtgcaggaactctgtccttctacagcgtctctgacacaatgaacctcatccacaca
gtccagaccacattcactcagccgctctatcctgggtttaatgtttggggatcaatgaat
ctccctgacctacaattatag
DBGET
integrated database retrieval system
