Labeo rohita (rohu): 127160648
Help
Entry
127160648 CDS
T09007
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127160648
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127160648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
U-box
zf-RING_2
zf-RING_10
zf-RING_6
MRP-S31
DUF4407
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
127160648
NCBI-ProteinID:
XP_050959264
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MAGAQFFQDEFLCSVCLDLLKDPVTTSCGHSYCKSCITGCWDQEDQMRVYSCPQCRQTFS
PRPALARNTMLTEVVEKLKKTKLPADCYAGAGDVQCDVCTGRKYKAVKSCLECLNSYCQN
HLEQHESFFKGKRHNVTDATGRLQEMICQKHQKILEVFCRTDQKCICVLCTIIEHKNHDI
VSAEEQRTEKQKQLKETQKTFQQRIQQREKDLQQLREAVESHKRSAQTAVEDSERIFTEL
IRSIERSRSELIRLIRDQEKRAVSRAEGRLERLEQEINDLRRRDAELEQLSHTQDHIQFL
QSFQSLSAPPESTDGNDDPFSSLVSFDGLRESVHQLRDKLEDFCKEELKKISDRVTFTNI
VPRTRNDFLQYSHQLTLDLNTVNKHLRLSENNRVITYTYTDQSYPDHPDRFDVYPQVLCR
ESVCGRCYWEIEWSGDGYGVFISVSYKSISRKGRGNECLFGCNDQSWSLFCSPSSYSFRH
NNIETDLPVKSISSRIGVFVDHSAGTLSFYSVSDTMSLIHTVQTTFTQPLYPGFYVNYVG
SSVKLC
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagcccagttttttcaagatgagttcttgtgttcagtgtgtctggatctcctg
aaggatccagtgaccacttcctgtggacacagttactgtaagagctgtattacaggctgc
tgggatcaggaggatcagatgagagtctacagctgccctcagtgcagacagaccttcagt
ccaagacctgctttagctagaaacaccatgctgactgaagtggtggagaaactgaagaag
accaaacttcctgctgactgttacgctggagctggagatgtgcagtgtgacgtctgtact
ggaagaaaatacaaagccgtcaagtcctgtctggagtgtctgaactcttactgtcagaat
caccttgaacaacatgagagtttctttaaaggaaagagacacaatgtgactgatgccact
ggacgactgcaggagatgatctgccagaaacatcagaagatccttgaggttttctgtcgc
actgatcagaaatgtatatgtgtgctgtgtacgattattgaacataaaaaccacgacatt
gtatcagctgaagaacagaggacagagaaacagaagcagctgaaggagacgcagaagacg
ttccagcagagaatccagcagagagagaaagatcttcagcagctgagagaggctgtggag
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgagctc
atccgctccattgagagaagccgctctgagctgatacgactgatcagagatcaggaaaag
cgagcggtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaggatcacatccagttcctg
cagagtttccagtctctctcagcacctcctgaatctacagatggaaatgacgatcccttc
agttctcttgtctcttttgatggtctgagagaatctgtccatcagctgagagacaaactg
gaggatttctgcaaagaggagctcaagaagatctcagacagagtcacattcaccaacatt
gttcccaggaccaggaacgacttcctacaatattcccatcagctcactctggatctgaac
acagtgaataaacacctccgtctgtctgagaacaacagagtgattacatacacttacaca
gatcagtcgtatcctgatcatccagacagatttgatgtgtatcctcaggtgttgtgtaga
gagagtgtgtgtggacgctgttactgggagattgagtggagtggagatggttatggtgtg
tttatatcagtgtcatataagagcatcagcaggaagggacggggtaatgagtgtttgttt
ggatgtaatgatcagtcctggagtttgttctgctctccctccagttactcattcagacac
aataacatagagactgatctccctgtaaagtccatcagcagtagaataggagtgtttgtg
gatcacagtgcaggaactctgtccttctacagcgtctctgacacaatgagcctcatccac
acagtccagaccacattcactcagccgctctatcctgggttttatgttaattatgttgga
tcatcagtgaaactgtgttga
DBGET
integrated database retrieval system
