Labeo rohita (rohu): 127165046
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Entry
127165046 CDS
T09007
Symbol
apba1a
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1 isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127165046 (apba1a)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
127165046 (apba1a)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
127165046 (apba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
PRT6_C
Motif
Other DBs
NCBI-GeneID:
127165046
NCBI-ProteinID:
XP_050965270
LinkDB
All DBs
Position
5:complement(14818479..14901040)
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AA seq
976 aa
AA seq
DB search
MSHQEAPHGQELREAAEADLERRGPEGQQPPSSHRRRHDNGDGSSRSGRPRNHHSNHGTE
NNHYQSQQQGAPRYRRYEGSNGGTNRTRAARRSTEEGDAEQQPVQQPIPRPAVTRYRRQG
DNEARIRAQQQRQRQRERQQRDAERAEQQRLEHQQHVISPTQPMPPTREPEEAEEDEGDG
GSALARSASTESGFHNHTDRAEGDAVMVLEAEPEDESTYGIPLRPESEEYTESAESEQQH
GGPAYLQPQYPPQPPPLPREPLPNAERPHDAETLNPNYSNYVYTQPMYRSTTGAGEAREG
GATEDEPYSEPYAEYTLQEHVYEEITDAPSSKAEGQTPQQRRAEFRLFDRDLYQQQEAVG
SRLHHYDERSDGESDSPEKEAEFAPYPRADSCEQDEDIDQIVAEVKESLSSQSLERVAMG
LDKDGNEEEEWPESESHGQIDEIKPPEPVSEREGVEQSPRSPSEEPAPVVRSSREKRDAI
SLAIKDIKEAIEEVKTRTVRSPYTPDEPKEPIWVMRQDLSPTAESDLQPSLGADSPGSGS
TSPQGAESSGRHLPSHEGSDSFESPSPASKESRRSLASFPTYVEVPGPCDPEDLIDGIIF
AANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKTAQKLAKNRKKAPEGEAQPMTEVDLFI
STQRIKVLNADSQETMMDHPLRTISYIADIGNIVVLMARRRMPRSDSQENMEASDPAQDE
KRQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMY
NDDLIHFSKSENCKDVYIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGRLN
IGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQLGF
SVQNGIICSLMRGGIAERGGVRVGHRIIEINSQSVVATPHEKIVHILSNAVGEIHMKTMP
AAMYRLLTAQEQPVYI
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccaggaggcgccgcatggccaggagttgagagaggcggctgaggcagacctg
gagcgtaggggccctgagggccaacagcccccttcatcccaccgtagacgccacgacaat
ggagacggcagctcccgctccggtcgtccccgcaaccaccacagcaaccatggtacagag
aataaccactatcagtcccaacagcagggggccccacgctaccgcaggtacgagggatct
aacggagggacgaaccgcacacgtgctgcaaggagatcaacggaagaaggtgacgctgaa
caacaacctgttcagcagcccataccaagacctgcagtgacacgctaccgcagacagggg
gacaacgaggcgcgaatccgggcccagcaacagagacagcgacagcgggagaggcaacaa
agagatgcggagagagccgaacaacagaggctggaacatcaacagcatgtcatctctcct
acacaacccatgccacccactagagaaccggaggaagctgaggaagacgagggcgacggc
ggcagtgctttggcccgatccgccagcactgagagcggcttccacaaccacacagacagg
gcagaaggggatgcagtcatggtcctggaagcagagccagaagacgaaagcacatacggt
atcccacttcgcccggaatcggaggagtacaccgagagcgcagagtcagagcaacagcac
ggtggtccagcttacctccaaccccagtacccacctcagccaccgccgctacctcgagag
cccctgcccaacgctgagaggccccatgatgcagagacgctaaaccccaactactccaat
tatgtttacactcaacccatgtaccgcagtaccaccggagcgggagaggcccgtgaaggt
ggagcaacagaagacgagccgtactctgagccctacgccgaatacacccttcaggagcac
gtttatgaagaaattacggatgcaccctcgagcaaagctgagggacagactccacaacag
cgtagggcagagtttagactcttcgatcgggacttgtaccagcagcaggaggctgttggg
tcgaggctccaccactacgacgagcgatccgacggagagtcggacagtcccgaaaaggaa
gcagagttcgccccgtacccccgtgctgacagctgcgagcaggatgaggacattgaccag
attgtggcagaggtgaaggagagtctgagctcgcagagcctggagcgtgtcgccatgggc
ctggacaaggacggcaatgaagaagaagagtggcctgagtcagagtcccacggtcaaata
gacgaaatcaaacctccggagccagtgagtgaaagagagggggtagagcagtcccccaga
agtccctctgaagagccagctccagttgtgaggagcagtcgtgagaagagagatgcaatc
tcactggctattaaggacatcaaagaggcaatagaggaggtgaagacaaggacggtccgc
tcgccctacacgccagacgagcccaaagaacccatctgggtaatgaggcaggacctgagt
cctacagcagaatctgacctgcagccgtctctgggggctgattctccaggctcaggctcc
acctccccacagggggcggagtcttccggccgtcacctgccgtcacatgagggaagtgac
agctttgagtctccgtctcctgccagtaaagagtcaaggagaagtcttgcttcattcccg
acatatgtggaagtaccaggcccatgtgacccagaggacctcattgatggtattattttt
gctgctaactatctgggatccacccagctgctctcagacaagacgccctccaaaaacgtg
cgcatgatgcaggctcaggaggctgtgagtcgcattaagacggcccagaaattagccaaa
aacaggaagaaggcaccagaaggtgaagctcagcccatgacggaggtggatctcttcatc
tccactcagagaatcaaagtgctcaatgcagattcgcaggagaccatgatggaccaccct
ttaaggaccatctcctacatcgctgatattgggaacatcgtggtgttgatggccagaagg
agaatgcctcgctccgactctcaggagaacatggaagcctctgacccggcccaggacgaa
aagcgccaatacaagatgatctgtcacgtgtttgaatctgaagatgctcagctcatagct
cagtccatcggccaggctttcagtgtggcgtaccaagagttcctgcgtgccaatggcatc
aacccagaggatctgagccagaaagagtacagcgacctccttaacacacaggacatgtac
aacgatgacctcattcacttttccaagtctgagaactgcaaagatgtttacatagagaag
cagaagggagagattcttggggtggtgatcgtggagtcgggctggggctccatcctgccc
acggttattatagcaaacatgatgcatggcggcccggccgagaagtctggcaggctgaac
attggggaccagattatgtccatcaatggcaccagcctggtggggttacccctctccacc
tgccagagtattatcaagggattgaagaaccaatccagaataaagctcaacattgtgaga
tgcccacctgtgaccactgtcctcatcagaagaccagacctgagatatcagctgggattt
agtgtgcagaatggcattatttgcagtctgatgagaggagggatagcagagcgcggtggg
gtgcgtgtcggccaccggatcattgaaatcaatagccaaagtgtcgtggccacccctcac
gagaagattgtacacattctgtcaaatgcagttggtgagattcacatgaagactatgccg
gctgccatgtaccgcttgttaacagcccaggagcaaccagtttacatctaa
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