Labeo rohita (rohu): 127165711
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Entry
127165711 CDS
T09007
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127165711 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127165711 (trim32)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127165711 (trim32)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127165711 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
zf-RING_4
zf-RING_11
GIY_YIG_2
Motif
Other DBs
NCBI-GeneID:
127165711
NCBI-ProteinID:
XP_050966539
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All DBs
Position
5:4386238..4392349
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AA seq
661 aa
AA seq
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MATPTSLDPDLVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCGSTMGLMCKSCKNRLPRQYCSDCSIVLCDN
CKNEGHQRQGHVVQAIRVAAEQRRKDISGKLSNLREAMGNIQKKKAAIDNVTKSLRLKYK
AVQQEYAKAELRLQEELGRSRRAFASSLAEIEKLNAQILEEQTYLLNIAEVQVVSRCDYL
TMRIKQTDIALLEEGSNNEEEELELKTNLPVILKLQDPEFVKTDCSKSLDVGQLTTKPCT
VNAEEEDGLDFATSAAAPLDIYRDIDMETAVEEAVCASPGSFKSKSVDGGGPSPGASGGQ
LCQFVKKMGCKGNLPGMFNLPVSICVTPQGEVLVADRGNYRIQIFNRKGFQREIRRNPSS
IDNFVLSFLGADLPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGHCIACHKNQLIKPW
GIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVTCDSSGTVYFTQGL
GLNIENRHNEHHLEGGFSVGSVGMDGQLGKQLSHFFSETEDFRCITGMCVDSNGDLIVTD
SGRKEILQFPKEGGYNILIQEGLTCPVGVAVTQKGQLLVLDCWDHCVKVYTYLQRRRSST
C
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccaacatctctagatccagatttggttcgggaggtgctggaatgccccatt
tgcctggagacctacaaccaggatcagcttcgacccaaactgctacagtgcggtcactcc
gtatgtcgccagtgccttgagaaactcctcgccagcacaataaatggtgtgcgctgcccc
ttctgcagcaaggtgtctcgtatgagcagcatttcccagctggctgacaatctcaccgtg
ctgaagatcattgactgtgcgagttcatgtggctctaccatgggtctcatgtgcaagtct
tgtaaaaaccgcctgccccggcagtactgcagtgattgcagcatcgtgttgtgtgataat
tgtaaaaacgagggccatcagcgccagggccacgtcgtacaggccattcgcgtggctgcc
gaacaacggcggaaggacatcagtgggaagctttctaacttgcgggaggcaatgggaaat
attcagaagaagaaggcagctatcgacaatgtgacaaaatcacttagactgaagtacaag
gctgtacagcaggagtacgccaaggctgagttgcgtctccaagaggaacttggccgctcg
cgccgtgcctttgcctcctccttggccgaaatagagaaactcaacgcccagattctggag
gagcagacgtacctgctcaatatcgctgaagtgcaggtggtgtctagatgtgactaccta
accatgaggatcaagcagacggatattgctttactggaggaggggagcaacaatgaagaa
gaagagttggaattaaaaacgaatttacccgtcattctgaaactacaagaccctgaattt
gttaaaacggactgctcgaaatccttggacgtggggcagctgaccacaaaaccctgcact
gtcaatgccgaggaggaagacggacttgatttcgccacttccgctgccgcccctttggac
atttaccgtgatattgacatggaaacggccgtcgaagaggccgtttgcgcttctcccggt
agcttcaagtccaagtctgtcgacggaggggggccttctccaggagcttctggtggccaa
ctctgtcagtttgtgaaaaagatgggttgcaagggcaatctgccgggcatgttcaacctg
ccagtaagcatttgcgtcacgccgcagggcgaggtgctcgtggccgaccgagggaactac
cgcatccagatcttcaaccgcaagggcttccaaagggagattcggcgcaacccgagcagc
atcgacaacttcgtcttgagcttcctaggtgccgacctgcccaacctcatcccgctctcc
attgcgatcactgctcagggcctcattggtgtcaccgataactacgacaactctgtgaag
gtttacaccaccgatggccactgcatcgcctgtcacaagaaccagctcatcaagccatgg
ggaatcgcggccatgccttcgggccagttcgttgtgtcagatgtggaggggggaaagctt
tggtgcctggccgtggatcgtaacgtaggggttgtgaattacaaccgcttatgttcggcc
gtcaggcccaaatttgtaacttgcgactcctcaggtacagtctacttcacacagggcttg
ggtctaaacatcgagaacagacacaacgaacaccacctcgaggggggtttctcagtcggc
tcggtgggaatggatggccagctgggaaagcaacttagccacttcttctcggagaccgag
gacttccgatgcatcaccggcatgtgcgtggactctaacggggacttgatcgtgacggac
agcggccgtaaggagatactacagttccctaaagaaggtggctataatattcttattcag
gaggggctaacgtgccctgtaggtgtggctgttacccagaagggacaactgctcgtctta
gattgctgggaccactgtgtgaaggtctacacttacttgcaaaggagacgttcctctaca
tgttaa
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