Labeo rohita (rohu): 127166400
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Entry
127166400 CDS
T09007
Symbol
rbfox2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127166400 (rbfox2)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127166400 (rbfox2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127166400
NCBI-ProteinID:
XP_050967572
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All DBs
Position
6:complement(225956..254030)
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AA seq
422 aa
AA seq
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MLMSTDVASVMLPVSRGILERDRDLDSGSAAVRGMKRGDPEPEGAAAAGDSVGAECKRAR
MDGTGDIGQGSQDAMGAPEGVVAPFSSFPPPPPPPPQNGLALEFGGGSIYPAGGQTEAPA
GVSSTPSSNPSTQLSDGSPQAEGQCVSAGGSGSDDSSEAKGTPKRLHVSNIPFRFRDPDL
RQMFGQFGKILDVEIIFNERGSKGFGFVTFESSADAEKARERLHGTIVEGRKIEVNNATA
RVMTNKKLVSPYANGEGLSTLPYAGWKLSPMMGAMYGPELYAVPGFPYPTAAAAAAASTA
ATFRGAHHLRGRGRPVYGAVRAAVPQPAIPAYPGVVYQDGFYGATELYSGYTAYRYTQPA
AVASPTAAAAAAAAAYSDSYGRVYAADPYAAALAAPAAAAAAYGVGAMATLYRGGYSRFS
PY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatctgtaatgctgcccgtgagccgcgggatcctggag
cgcgacagggacctggactcgggttcggcggcggttcggggcatgaagcgcggggacccg
gagccggagggcgccgcggcggcgggggattcggtcggggctgagtgcaaacgagcgcgg
atggacggaaccggagacatcggacagggttcacaggacgcgatgggagctccggagggc
gtcgtggctccgttctcctccttccctccccctccgcctcctccccctcagaacggcctg
gcgctggagttcgggggcggcagcatttaccccgcaggggggcaaacggaggccccggca
ggagtcagcagcaccccctcctctaaccccagcactcaactgtcagacggctctcctcag
gcagaaggtcagtgtgtttctgccggcggttcgggcagtgacgactcctccgaggccaaa
ggaaccccgaaacggctccacgtgtccaacatccccttccgcttcagagacccagacctg
cggcagatgttcgggcaatttggaaagattctggatgtggagatcattttcaatgagagg
ggctcaaagggttttggttttgtgacgtttgagtccagtgcagacgcagagaaagcgcga
gagcgtctccacgggaccatcgtggagggacgaaagatcgaggtcaacaacgccacagct
cgagtgatgaccaataagaagttggttagcccgtacgctaacggagaaggtctcagcacg
ctgccctacgctgggtggaaactgagtcctatgatgggcgccatgtacggaccggagctc
tatgcagttccagggtttccatatcccactgccgccgccgcagctgccgcctccacagct
gcgaccttcagaggggctcatcacctgcggggtcgcgggcggcccgtctacggagccgtg
cgcgccgccgttccgcagcccgccattccggcctacccaggtgtggtgtaccaggatggg
ttttatggagctacagaactgtatagcggctataccgcgtaccgctacacccagccggcg
gccgtagcgagtccgacagcggcggcggcggcggcggccgccgcctacagtgacagctac
ggccgcgtgtacgcagcagatccgtacgcggctgcgctagcggctcccgcggcggcggcg
gcggcgtatggagtcggcgcgatggccactctgtacagaggaggatacagccggttttcg
ccatattaa
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