Labeo rohita (rohu): 127168013
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Entry
127168013 CDS
T09007
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127168013 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127168013 (nod2)
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127168013 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
NOD2_WH
LRR_4
AAA_16
AAA_29
AAA_22
T3RM_EcoP15I_C
Viral_helicase1
AAA_30
ABC_tran
nSTAND3
T2SSE
Motif
Other DBs
NCBI-GeneID:
127168013
NCBI-ProteinID:
XP_050970445
LinkDB
All DBs
Position
7:26588320..26598234
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AA seq
982 aa
AA seq
DB search
MSAHQLVLKQRAELLSVLCGGGSAEPLDCVLDLLLAWEILVWEDYLSIRVAEKSLCSNVR
QLLDVVYDKGEDACSLLLAAMNQVLPEEQKAGLSFGKECAVVDKNRPDTAASMLLADRPV
LVGKLRDNIDGALNALLTTGCFTIKDCDAVQLPVYTPSQQVRRLLDQVRFKGETAAKTIL
QYLEQTEPTRPNPEDKENHLSANVLLYQKKLRSSVAAQSHSLSTYGGTGRFSLDDIYTDG
LLEVMNGSGETTTLGLEDVVGPLGTLNEDADTVLVSGEAGSGKSTLLQRLHLLWAREALL
TNTFLLFPFSCRKLNAEHRELSLKELLFLHCCWPDRGQDEVFQFVLDHPNLVLFTFDGLD
EFKQGFTDEERHCCPTKQVPIPVLLFNLLQGTLMKGVMKVVTSRPQAVGPSLKRYLRKEV
LLKGFSPGGIDCFVKKHHSDPAMARRVIESLQANMVLLSLCHIPVFCWIVTKCHQELLAG
QDSVPQTITDVYLLVLQHFFQRKSSQSQGVLGKAWLEEHLDTVLKLGQLALEGLEASCYV
FSGYELQRNGLTEQDVSMGFLIYCNDLSVTDCKRYEFIHVTLQCFFAALYVVLNRNGDRS
AISRLFQPQYRQLSGRSQRCLGHCIDSSVEEVESHVTETPNLQITAQFVSGLLSRRHHYL
LLECCPAAVWERKVKQVVKLLSKGMQRHFKSIPRPVEGEKKSMHAMPSFVWLIKCIYEMQ
DNSIAQDTMAKLDVEHLKLTYCNIGPVECTALAYVLKYLRNPVGLQLDNNSVGDVGVEQL
LPCLHICHSLYLRNNNISDEGIRKLLEKGMTCESFQKIALFNNNLTDACTQHFALLLKSK
QNFLALRLGNNNITSQGAEQLAEGLSYNQSLQFLGLWGNKIGDRGAEALASALKNSTSLI
WLSLVDNGVGSAGACALAELISQSKTMQELWLNKNCITREGVECLIEALKMNTSIKEVWL
KGNNLRPEEEEELSKQESRLTF
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcaccagttggtcctaaaacagcgagcagagcttctgtcagtcctgtgtggc
ggagggagcgccgaacctctggactgtgttctggacctgcttctggcttgggagattctt
gtttgggaggattacctaagcatacgagtggcggagaaatctctatgttccaatgtcagg
caacttttagatgtggtgtatgataaaggagaagatgcatgcagccttctcttggctgcg
atgaaccaggtcttacctgaggagcaaaaggctgggctgtcttttgggaaagaatgtgct
gtggtggacaagaacagaccagacactgcagcttcaatgttattggctgacaggccagtg
ttagtgggaaagctcagagataatattgacggagcattaaatgccttactgacaactggg
tgcttcaccattaaagattgtgatgcggtgcaactacctgtatacacaccctcacaacag
gtccggaggctgttagaccaagtgaggtttaaaggagaaactgctgcaaagaccatacta
caatatctagaacaaacagagccaaccagaccaaaccctgaagataaagaaaatcacctt
tctgccaatgtattgctgtaccagaagaagctgcgaagctctgttgctgcccagtcccac
tcccttagcacctatggcgggacaggacgtttctccttggatgacatttacaccgacgga
cttcttgaagtgatgaatggctctggtgaaactactacgctagggctggaggatgtggtg
ggtcccttggggactcttaatgaagatgctgacaccgttcttgtttctggggaggcagga
agtggcaaaagcacactgcttcagcgactgcacttgctctgggcaagagaagctttgctc
acaaacactttcctgttattccccttcagttgccgcaagctaaatgcagagcacagagag
ctatctctgaaagagctcctctttctgcactgctgctggcccgatcgaggtcaggatgag
gttttccagttcgtcctagaccatcctaatttggtcctctttacctttgatggactcgat
gagtttaaacagggtttcacagatgaagaacgccactgctgtcctacaaagcaagtgcct
atacctgttttgcttttcaatctgttgcagggtactctaatgaagggtgttatgaaggtg
gtcactagcaggccacaggctgtgggcccatcgctgaagcgctatctccgcaaagaagtg
ctcttgaagggtttttctcctggaggtattgactgctttgttaagaaacatcacagcgac
ccggctatggctagacgtgtcatagagtccctccaggctaacatggtgttgctaagtctt
tgccacattccagtcttctgctggattgtgaccaagtgccaccaggagcttctggctggt
caagatagtgttccccagactatcactgatgtttacctcctggtcttacagcatttcttc
cagcgaaagtcatctcagtctcaaggagtcctgggaaaagcctggttggaggaacatctg
gacacagtgttaaaactcggacagcttgcattggaaggtctggaagcctcttgttacgtg
ttctcaggatatgagctacaaagaaatgggctcacagaacaggatgtcagcatgggtttc
ctcatttactgcaatgacctatctgttacagattgtaaacgctatgaatttatccacgtc
accttacaatgtttcttcgccgctctttatgtcgttctgaatcgtaatggcgatcgctcc
gcaatctccagactctttcagcctcagtacaggcagctgtcgggcagatctcaaagatgt
ctaggacactgtattgacagttctgtagaggaggtggagtcccatgtgacagagacaccg
aacctccagattacagctcagtttgtgtcaggacttttatcccggcggcaccattatctc
ttgctagaatgctgtcctgctgctgtgtgggaacgcaaggtcaagcaggtagtgaagttg
ttgtctaaaggtatgcagagacatttcaagtcaattcctcgtcctgtagagggtgaaaag
aagagcatgcatgccatgccaagttttgtttggctaattaagtgtatctatgaaatgcaa
gacaacagtattgctcaagataccatggctaagctggacgttgagcatctgaagctcacc
tactgtaacattggacctgtggaatgtactgcgctggcatatgtgctaaaatacctgcgg
aatcctgttgggctccagttggacaacaattcagtgggagatgtgggcgtggagcagctt
ctcccatgtctacacatttgtcactccctctatttaaggaacaataacatatctgatgaa
ggaatccggaaacttctggaaaagggaatgacgtgtgaaagcttccaaaaaatagcgctt
ttcaacaacaacctcacagatgcttgcacccaacactttgctttgctgttaaaatcaaag
cagaacttcctagctttgaggcttggaaataataacatcacgtcgcagggagcagagcaa
ctggcagaaggcctaagctacaaccagtctttgcagtttcttggattatggggtaataaa
attggggacaggggagctgaggcattggcatctgctctgaaaaacagcacatcgctgata
tggctaagtctggtggataatggtgtgggcagtgcaggtgcatgcgctcttgctgaactc
atcagtcagagcaaaactatgcaggaactgtggctaaacaaaaactgtatcaccagagag
ggggttgaatgtctaatagaggcactaaaaatgaacactagtattaaggaagtctggctg
aaaggaaataatctgcgcccagaggaagaggaggagctgagcaagcaggaaagcagattg
accttttga
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