Labeo rohita (rohu): 127168014
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Entry
127168014 CDS
T09007
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04217
Necroptosis
lroh04622
RIG-I-like receptor signaling pathway
lroh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127168014 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127168014 (cylda)
04625 C-type lectin receptor signaling pathway
127168014 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127168014 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127168014 (cylda)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127168014 (cylda)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C67
127168014 (cylda)
Ubiquitin system [BR:
lroh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127168014 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
127168014
NCBI-ProteinID:
XP_050970449
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All DBs
Position
7:26598315..26622114
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AA seq
952 aa
AA seq
DB search
MSSALWSQEKPAGSFRDDWRFYIVVKECTVEKPGQKTLRIPRGSLGQACQERNSLGRTIP
ASKGKRSLRILDQTNVVVSVDERDVMELEEKLAELLFPITNCEERYSLLCNRTRLDRARD
INCGSKVRVQLRSGDEPLPGVVRFKGALLPDRALSGIWFGVELLEEGRGQGFTEGSYQGQ
QLFRCEDECGVFVALDKLELWEDDELEVDRVTLEDNDPEVEGEAPPLEINSRVLVQTREG
PERGTVIFCDLLPGNESLGYYVGVDMDNPIGDWDGIIDGKQLCNFASLEHTRLVPICDVM
PEYSMQEQRLPKVFACRGSSDKPGSQTKPKSKGLGLQPGSRSKSEFYYTLNGSSVDHPAQ
SKAKSTWYIDEVGEDPAKSLTDTPPDFNPSSSPSRAPPTTSSLSNDNKFHSLPFSLSHKV
GPSGSMSHGPLSLSAGSVMGEQQEILPPATTPVQRPPSPPQGQPGLEVGSLVEVKENPPL
CGVIRWVGLPPGLQEPLAGLELEEECVGCTDGTFKGIRYFTCPPKKALFVKLKCCRPDSR
FPSLHHSPNPIERCNSIAFGGYLSEVVNENTPPRTENDGLEVMVGKKKGIQGHYNSCYLD
STLFCLFSFSSVLDTVLLRPRSKTDVEYYKETQDLLRTEIVNPLRIHGYVCATKIMKLRR
ILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDKKDK
VLVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLDDT
PRECRICGGLALYECRECYEDCDITPGKIKQFCEKCNTQVHLHPRRKSHRYVKLSVPKEL
QESVWRQGSYPHQQMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGFNIP
QVSPCPEVGAYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgcgctatggagccaggagaagccagcaggcagtttccgggacgactggcgc
ttctacattgtggtgaaggagtgtaccgtggaaaaaccgggccagaagaccctgcgaatc
ccacgcggcagcctcggccaggcctgccaagaacgcaacagcctgggccgcacaatcccg
gccagcaagggtaagcgcagcctacgcatcctggaccagaccaatgtagtggtgagcgtg
gatgaacgggacgttatggagcttgaggagaagctggccgagctgctgttccccatcacc
aactgcgaagagcgctacagcctgctgtgcaacagaacacgtttagacagggcccgtgac
atcaactgtggatcaaaggttcgagtgcagctgaggtccggcgatgagcctcttccaggc
gtggtccggtttaaaggagctttgctgcctgatcgagcgctaagcggtatctggtttggt
gttgaattactggaggagggccgaggtcaaggttttacagagggttcttatcagggtcag
cagctattccgatgtgaagatgaatgcggtgtctttgttgcactggataaacttgagctc
tgggaagatgatgagctggaggtggatcgtgtgacgctagaagataatgacccggaagta
gaaggcgaggcaccgccactggaaatcaactctcgagtgttggtgcagacacgagaaggc
ccggaacgaggcactgttattttctgtgacttactgcctggcaacgagagtcttggatac
tacgttggtgttgatatggacaatcccattggagactgggatgggatcatcgacggcaag
cagctgtgtaattttgctagtcttgaacacacccgtctcgtccccatctgtgatgtgatg
ccagaatactccatgcaggaacagaggctgcccaaagtctttgcctgcaggggcagcagt
gacaaacctggcagccagaccaaaccaaagagcaaagggttaggcctgcagcctggcagc
aggagcaagtctgaattttattatacgctaaacggcagctcggttgatcaccctgctcag
tccaaagccaaaagcacatggtacatagatgaagtcggcgaggacccggccaaatccttg
acggacacgcccccagacttcaacccaagctcatccccttctcgagcgccgcccacaacc
tcctcgctgtccaatgacaacaagttccactccctgccctttagcttgagtcacaaagtt
ggccccagcgggagcatgagccatggccctctctccctgtccgctggctcagtgatgggg
gagcagcaagagatcctgccacctgctacaactcctgtccagaggcctccatcgccacca
cagggccagccagggttagaggtcgggtcattggttgaggttaaagagaacccaccactg
tgtggggtcatacgctgggttggcctacctccaggactacaagagccactagccgggcta
gaactggaagaggagtgtgtgggttgcactgatggaacgtttaaaggcattcgttatttt
acatgtccaccaaagaaagctctgtttgtcaaactgaagtgctgcaggcctgactcacga
ttcccatccttacatcattcacccaaccccatagagcggtgcaactccatagcttttggt
ggttacctaagcgaagtagttaatgagaacactcctcctcgaacagaaaatgatggttta
gaggtgatggtggggaaaaagaaaggaatacaaggacattacaactcctgctatctggac
tctactctcttctgtcttttctcctttagttctgtgttggatacggtgctcctgaggcca
agatctaagactgatgtagaatattacaaagagacacaagacttactgcgcacagaaata
gtcaacccactacgaatacatggctatgtgtgcgccactaaaatcatgaaacttaggagg
atattggagaaagtggaggcagcgtctggattcacttcagaagagaaagatcctgaggag
ttcctcaacatcctgtttcatcacatcctgagagtcgaccctcttcttaaacttcggtct
gcaggacagaaggttcaggactgttacttctatcaaatcttcatggacaagaaagataaa
gtgctggtgccaaccagccagcaacttctggagtggtctttcatcaacagtgatctcaaa
tttgcagaggccccttcttgccttataattcagatgcctcggtttgggaaggactttaag
atgtttaataagatcttcccttctctggagcttgacatcacagatctattagatgacact
cctagagaatgtcgaatctgtggtggcttagcgctttacgagtgcagggagtgctatgaa
gattgtgacatcacaccaggaaagatcaagcaattctgcgaaaagtgcaatacacaggta
catctgcacccacggcgtaagtctcatcgatatgttaagttatcagtccctaaagagctg
caggagtccgtttggagacagggttcttaccctcaccagcagatggagctgtttgccgtg
ctctgcattgagacgagccactatgtcgcctttgtcaaatacggatccgcagactcagcc
tggctgttcttcgatagtatggccgaccgtgacggtggtcagaacggctttaacatccca
caggtgtccccatgccctgaagtaggggcctacctaaagatgaccccggaggagctccac
gcactggaccccaagaacatccagggctatgcacgcagacttctctgtgacgcctatatg
tgcatgtaccagagtcccaccatgagcctctataaatag
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