Labeo rohita (rohu): 127171839
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Entry
127171839 CDS
T09007
Symbol
nbeaa
Name
(RefSeq) neurobeachin a isoform X1
KO
K24183
neurobeachin
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127171839 (nbeaa)
Membrane trafficking [BR:
lroh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
127171839 (nbeaa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Laminin_G_3
Neurobeachin
WD40
DUF4800
Motif
Other DBs
NCBI-GeneID:
127171839
NCBI-ProteinID:
XP_050976716
LinkDB
All DBs
Position
10:complement(4583731..4746303)
Genome browser
AA seq
2993 aa
AA seq
DB search
MSSEKPVLAPGSASLTDREAPTPPPAAATAAAPPGSGQQVVTGSVTGDMMVSGSGAVVLP
AGVINPSVPIRNIKMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEFDLEMNFIIQDAES
IACMVELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIQQVLQKMSAVDDMIADL
LVDMLGVLASYSITVKELKLLFSMLRGDGGVWPRHAIKLLSVLNQMPQRHGPDTFFNFPG
RSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFRTSKGIGYSAHFVG
NCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYGDMA
WHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNPAQIFAIHQLGPGYKSTFK
FKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCLESSPRENPSIFVHSPHALM
LQDVKAIVTHSIHSAIHSIGGIQVLFPLFSQLDYRQPNDSPVETTVCATLLAFLVELLKS
SVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLTHGAPLLKQLCDH
VLFNAAIWIHTPAKVQLSLYTYLSAEFIGTATIYSTIRRVGTVLQLMHTLKYYYWASNPL
ESSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDE
NIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKLLASKSESIRVQALKVLGYFLKHLG
HKRKVEIMHTHSLFTLLGERLMMHTSTVTITTYNTLYEILTEQVCTQVVHKPHPEPDSTV
KIQNPMILKVVATLLKSSSPSAELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMF
SLGYINPKNPEEQKITEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHKEY
LAKMYEEYQRQEEENIKKGKKGSVSTISGLSAQPTTVNGNLEIREIDDTSQTQTPESEAD
YGENADSRNLLAETKGPEGEGERSAAGVRVEVHDLLVDIKAEKVEATEVKLDDLDLSPEV
LGGGGGMENGPLVEVDSLLDSAYCAAVHKLNGSLVPKEEESVVVGLTEDDGNMGPLITLA
DEKDSVPSNNGFLFPKVDEKLLPSLASTEPLVLPSPEQPTCTTTPHTSSASDDLSLLAHM
TSCGSDLVQTPSGLTEDDGFKLQSSLADISTLAEAEAQAAARTAECLEQDVGEARGGKSG
GDAASTTSDTERSDDGKDKEMKKIQTTATTQALHGRMSGQMERDLRVDLGFRGMPMTEEQ
RRQFSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALESDVHMWRSHSTKSVMDFVNSNENI
IFVHNTIHLISQMVDNIIIACGGILPLLSAATSPSTQGGSCLQKGTKSNEVNSLPGSSGT
GAETELENVEATQGMSSETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSSGGLMRQC
LRLVCCVAVRNCLECRQRQRDRGSKTSLPISKTQENLQTAASASKTVIQNVPRNLSPIKD
PDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDILEPQREIGRSS
SLSGRSIRQEINSPTSTENPSSFSDGVRGQAATPLDDLPLEGSLPHTDSGIGEEQVTSAL
NGSELGADSSGLGGSSGGPDAMSELLCTLSSEVRKSRESLLESPPGVEVLKPAASISSIS
QANKGINVKEILKSLVAAPVEGAEAGPEPQPYHPDPALKREAAAMLPMQFHSFDRSVVVP
VKKPPPGSLAVNTVGTPTTSGVPSSGSTPNIFAAATATPKSMINTTGATDSASSSSSSSS
SFVNGATSKNLPAVQTVAPMPEDTVENMSAFCEVDQCPLRTRLTPPELKSFSSLTGFQTA
PRDAGQFLSITTKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSST
SVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRA
EDVHKHAEFESNCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAW
GTMSQSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHSDVALKSLEEYGPEEEEGMKSKKS
FRSHSVVNQNPETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLVAPVIVARGTLSI
TTTEIYFEVDEDDPTFKKIDSKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTGLEVFMAN
RTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLFKSSNMTQRWQRRE
ISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEDLDLTLPGNFRDLSKPIGALNPK
RAVFYAERYETWEDDGTPPHHYASLYSTAASTLFWLVRIEPFTTFFLNCNNNKFDHPDRT
FSGIARSWRSCQRDTSDVRELIPEFYYLPEMFVNSSGYDLGVREDRTAVCDVELPVWAKK
PEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAIRALNVFHYLSYEGSVNLDSIT
DPQLRESMEAQIQSFGQAPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKF
PSNSPVTHVAANTLPHLSIPAAVTVTCSRLFAVNRWHNTVGLRGAPGYSLEQAHHLPIEM
DSLIANNSGISKRQITDLVDQSIQINTHCFVVTADNRYILACGFWDKSFRVYSTETGKLT
QIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNNSDYPAPR
AVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPENCLRPRLISVSS
EGHCIIYYERGHFCNFSINGKLLAQMEINDSTRAILLSSDGQNLVTGGDNGVVEVWQACD
FKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8982 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgagaaaccggttttggcaccgggttccgcctcgctcacggaccgagaagcc
cccacgccaccaccagcagcagcgacagcagcagcaccgccgggttcggggcagcaagtc
gtaacgggctccgttaccggggacatgatggtgtctggatcgggcgccgtggttctaccg
gccggggtgataaacccctcggttccgatccggaatatcaagatgaaattcgccgtgctc
atcggtttgatccaggtcggggaggttagcaacagagacatcgtggagacagttttaaat
ctgctggtgggcggagagtttgacctggagatgaacttcatcatccaggacgcggaaagc
atcgcctgcatggtggagctgctggagcactgtgacgtcacctgtcaggcggagatctgg
agcatgttcacagctatcctgcggaagagcgttcgcaacctacagaccagcaccgaggtg
gggctcatccagcaggtgctgcagaagatgagcgccgtcgacgacatgattgcagatctc
ttagtagacatgctgggggttttggccagctatagcatcacagtcaaggaactgaagctg
ttgttcagcatgctgaggggcgacggaggcgtgtggccaagacacgccattaagctccta
tcagtgctgaatcagatgcctcagcggcacggccctgacaccttcttcaacttcccagga
cgcagtgcggcggccattgctttgccgcccattgctaagtggccttaccagaacggattc
actctcaacacttggttccgtatggacccactcaataacatcaatgtagacaaggataaa
ccatacttatactgttttcgaaccagcaaagggattggctactcagcgcactttgtggga
aactgtttaattgtgacatcactgaaatcgaaggggaaaggctttcaacactgtgtgaag
tatgacttccagcctaggaagtggtacatgatcagcatagtccacatctacaaccgttgg
aggaatagtgagatccgttgctatgtgaacggccagctggtttcctacggtgacatggca
tggcacgtcaacaccaatgatagttatgataaatgtttcctgggctcttcagagactgcg
gatgctaaccgggtgttctgtgggcagctcggagccgtctacgtcttcagtgaggctctg
aaccccgcacagatcttcgccattcatcagctcgggcctgggtataagagcacgtttaag
ttcaagtcggaaagcgacatccacctggctgagcaccataagcaggttctgtatgacggg
aagttggctagcagcattgccttcacctacaatgctaaagccaccgacgcacagttgtgc
ctggagtcctcgcccagggaaaacccctccatatttgtgcactcgccacatgccctgatg
ctgcaggatgtgaaggccatcgtcactcactccatccacagcgccatccactctattgga
ggaatacaagttctcttcccacttttctcgcagctggactacaggcaacccaacgacagc
cctgtggagacgaccgtctgtgccactctccttgcttttctagtggagttgttgaagagt
tcagtagccatgcaagagcagatgttgggtggaaagggcttcctggttattggctattta
ctagagaagtcttctcgggtgcacatcaccagggcagttttggagcaatttctgtcattt
gccaagtatctggatgggttgactcatggagctcctttactgaagcagctgtgtgatcac
gttttgtttaatgctgccatctggatccatacaccggctaaggttcagctttccctctac
acgtacctgtcggcagaattcattggcaccgccaccatctacagcaccatccgtcgagtg
ggcaccgtcctgcagctcatgcacaccctcaagtactactactgggccagcaaccccctg
gaaagtagcggtatcacccctaaaggcctggatggtccacggccctctcagaaggagatt
atatccctgcgggcattcatgctgcttttcctcaaacagctcattctcaaggaccgagga
gtgaaggaagatgagttgcagagcatattaaactacctgctaaccatgcatgaggatgaa
aacatccatgatgtgctgcagctcttggtcgcgctcatgtctgagcaccccgcctccatg
atccctgccttcgaccagaggaatggaatacgagtcatctacaagctcctggcctccaaa
agcgagagtatacgagtccaagctcttaaagttctcggctacttcctgaaacatctggga
cacaagagaaaggtggagatcatgcacacacacagcctcttcacgttgctcggagagcga
ctaatgatgcacaccagcactgtgaccatcaccacctacaacacgctctatgagatctta
acagaacaggtttgcactcaggtagtgcacaagcctcatccagaacccgattcaacagtc
aagatccaaaaccccatgattctgaaggttgtggctacactgcttaaaagttcttccccc
agcgctgagctgatggaagtacgacgcctcttcctgtccgacatgatcaaactcttcagc
aacagcagagaaaacagacggtgtctgctgcagtgttcagtgtggcaggactggatgttc
tctcttggctacattaacccaaagaaccctgaggagcagaagatcaccgaaatggtctac
aacatattccgcatcctgctctaccatgccatcaagtatgagtggggaggctggcgcgtg
tgggtggacacgctctccatcgcccactccaaggtgacctacgaggcgcacaaagagtac
ctggcaaagatgtacgaggagtaccaacgacaagaggaagagaacatcaagaaaggaaag
aaaggttccgtcagcacaatttccggtctttccgctcaacccaccactgtcaacggaaac
ctggagatccgcgagattgatgacacatctcaaacgcagacaccagagagcgaggctgac
tatggagaaaacgcagactcacggaacctactagccgagaccaaaggtccagagggcgaa
ggcgaacgctcggccgcaggggttcgtgtagaagtccatgacttgctggtagacatcaaa
gctgagaaggtggaagccacggaggtgaaattagatgatctggatctgtccccggaggtt
cttggaggaggaggtggcatggagaatggacctttggtggaagtagactcgctgttggac
agcgcctactgtgcggcagttcacaagctcaacgggagccttgtccccaaagaggaggaa
agcgttgtggtgggtttgactgaagacgatgggaatatgggtcctctaatcacgctcgca
gacgaaaaggacagcgttcccagcaacaatggcttcctgtttccaaaggtagatgagaag
ctgcttccctcactggcgtcgacggagcccctggtgctgcccagccctgagcagcccact
tgtacaacaaccccacacacttcgagcgccagtgatgacctcagcctgctggcccacatg
acttcttgtggctcagatctggttcagaccccaagtggcctaacagaggatgatgggttt
aagttgcagagctccttggcggacatcagcacgctggcagaagcagaggcccaggctgca
gccaggacagcagagtgtttggaacaagacgttggggaggccaggggtggaaagagcgga
ggagatgcagcgagcacgacttcagacacggagagatctgacgatggaaaggacaaagaa
atgaagaagattcagaccacagccaccacacaggctcttcatggtcgtatgtcaggtcaa
atggagagggacctccgtgtggatctgggcttccggggcatgccgatgacagaggaacag
cggcggcagttcagccctggccctcgaaccaccatgttccgtatcccagaattcaaatgg
tcacccatgcatcaacggcttctcactgacctgttgttcgccctggaaagtgacgttcac
atgtggaggagccactctacgaaatcggtcatggacttcgtaaacagtaacgagaacatt
atatttgtccacaacaccatccacctcatttctcagatggttgataacatcattatagcg
tgtggcgggatccttcccctgctctctgctgccacctccccatctacacaaggaggttct
tgcttacagaaagggacaaaaagcaatgaagttaatagcctgccaggaagctctggcaca
ggggcagagacggagcttgagaatgtggaggcgacccagggcatgtcttcagaaactgca
gtcacttttctgagccggctgatggccatggtggatgtgcttgtgttcgccagttctctg
aatttcagtgagattgaggctgaaaagaacatgtcgtcagggggactaatgcgccagtgt
ctacgattagtatgttgtgtagcagtgaggaactgtctggaatgtaggcagaggcagaga
gacagaggcagcaaaacctcgctgccaatcagcaagacccaggagaacctacagactgca
gcgtccgccagcaagaccgtcatacaaaacgtcccgcgtaacctttctcccatcaaagac
ccagacagactgctgcaggacgtggacatcaatcgtctccgagctgtcgtcttcagagac
gtggatgacagtaaacaagctcagttcctggctctggccgtggtgtacttcatctctgtt
cttatggtgtccaaataccgggacatcctagagccacagcgggagatcggcaggtccagc
agcctatcagggagaagcatccgacaagagattaattcacccaccagcacagaaaaccca
tcctccttctcagatggtgtacgtggacaggctgccacccctctggacgatcttcccctg
gagggctcgctgcctcacactgactccggtatcggggaggagcaggtcaccagtgctctc
aatggctctgaactgggcgcagactccagcggattgggtgggagctccggaggcccagat
gccatgagcgagttgttgtgcacactatcatcggaggtgaggaaatcccgcgagtccctg
ctggagtcgcctcctggcgtggaggttctgaaaccggccgcgtcaatctccagcattagc
caggccaacaagggaatcaatgtgaaagagatcctgaagagtttagtggctgcaccggtg
gagggggccgaggcagggcccgagccccagccgtaccaccctgaccctgccctgaagagg
gaagctgctgctatgctgcccatgcagtttcactcgtttgacaggagtgtggtggtgcct
gttaagaaaccccctccaggaagcctggctgtgaacacagtaggaacacccaccaccagt
ggagtgccctcttcaggaagtacgcccaatatctttgctgctgccacggcaacacctaaa
agcatgatcaacacaacaggtgccactgactctgcctcttcctcatcctcctcttcatca
agttttgtgaacggtgccacaagtaaaaacctcccagcggtgcagaccgttgcacccatg
cctgaagacacggtggaaaacatgagtgccttttgtgaagtggaccagtgtccactgcga
accaggctgacgcctcctgaactcaaatcctttagttcgctgacaggattccaaacagcc
cccagagatgcaggacagtttcttagtatcacgactaaattggagcgcgccctagagaaa
gtggcccccttgttgagggagatctttgtggatttcgcccctttcctttcgcggactctg
ctgggcagtcatgggcaggagttgctcatagaaggcttagtttgtatgaagtccagcaca
tcggttgtggagcttgtgatgctcctgtgctcacaggagtggcagaactctatacaaaag
aacgcaggacttgcattcattgaacttattaatgaggggaggcttctgtgtcatgccatg
aaggatcacattgtccgtgtcgccaatgaggccgagttcatcctcaacaggcagagagca
gaagatgtgcacaaacatgctgagtttgagtctaactgtgcccagtacgctgcagacagg
agggaagaggaaaagatgtgtgatcacctcatcagtgccgcaaagcacagagatcacgtg
accgcaaaccagctgaaacagaagatcctcaacattttgaccaataagcacggagcttgg
ggaaccatgtcacagagtcagctgcatgatttctggcgtttggactactgggaggatgac
ttgcgtaggaggcggagattcgtacgcaatgcctttggctccacccactcggatgtagct
ctcaaatctcttgaggaatacggccctgaggaagaagaaggcatgaaatcaaagaagtcg
ttccgtagtcattcggtggtcaatcagaaccctgagacagagctgatgctggaaggagat
gatgacgccgtcagtctgctgcaggagaaagagatcgacaaccttgcaggtccggtggtt
ttgagcacgccggcccagctcgttgctcctgtgattgtagctagaggaacattgtcgatc
accacaactgagatctatttcgaagtggacgaggatgatccaactttcaagaagattgat
tcgaaggtgttggcatacactgagggtcttcatgggaaatggatgttcagtgagatcaga
gcagttttttccagacgctacctgctccaaaacactggattagaggtcttcatggccaac
aggacatccgtcatgttcaacttcccggatcaggccacagtaaagaaggtagtgtacagt
ttacctcgggttggcgttggcaccagctatggcctccctcaggcaagacggatctctttg
gcaacaccaaggcagctctttaagtcttctaatatgacacagagatggcagcggagggag
atttcaaattttgagtacctcatgttcctcaacacgattgcagggaggacctacaatgat
ctgaaccagtatcctgtcttcccttgggtcctgactaactatgagtcagaagacctggat
ctaaccttgcctgggaatttccgggatctctcaaagccaatcggagccctgaatccaaag
cgagctgttttctatgccgaacgctatgagacgtgggaggatgacggaactccaccccat
cattacgcatcactgtactccactgcagcatccaccctcttctggcttgtcaggatagaa
cccttcaccacatttttcttgaattgtaataacaacaagtttgaccatcccgatcggacg
ttttctggcatcgcacgctcttggcgaagttgccagagggatacatctgatgttagggag
ttaatccctgagttctactacctccctgagatgttcgtgaacagcagcggctacgacctg
ggggtgagagaagacagaacagccgtgtgtgacgtagaactaccagtctgggccaaaaaa
ccagaggactttgttcgcatcaacagaatggcgctggagagtgaatttgtgtcctgtcag
ttgcaccagtggatcgatctcatctttggctacaagcagagaggaccggaggccattagg
gctctcaatgtttttcattacctgtcttacgagggatccgtgaacttggacagcatcacc
gacccccagcttagagagtccatggaggctcagattcagtcatttggacaggctccatca
cagctgctaatagagcctcatcctccgcgcagctccgccatgcacctgtgtttccttccc
cagagtcctctgatgttcaaggaccagatgcagcaagatgtaatcatggtgctaaaattc
ccctccaactctcccgtcacacacgtggcggccaacacgttgcctcacctcagcattccc
gctgcggttacggtcacatgcagccggctgttcgctgtcaaccgttggcacaacacagtc
ggtctcaggggtgctccaggatactcattagaacaggctcatcaccttcctattgagatg
gactccctgattgccaataactctggcattagtaaaaggcagatcacagatttggtggat
caaagcattcagatcaacacgcactgctttgtggtgacagctgacaaccgctacatcctg
gcgtgtggtttctgggacaagagtttccgtgtttactccactgagacagggaaactcact
cagatcgtgtttggtcactgggatgtggtgacctgtcttgcacggtccgagtcctacatt
ggaggcgattgctacattgtctctggctcacgagatgcaacccttcttctgtggtactgg
agcggacgacaccacatcatcggagacaatcccaacaacagtgattatccagcacctaga
gcagttctgacaggccatgaccatgaggtggtgtgtgtgtcagtgtgtgctgaactggga
cttgtcatcagtggggccaaagagggaccttgtttggtgcacaccatcacaggagattta
ctgcgggccctggagggccctgagaactgtctccggccccgtctgatctctgtgtccagt
gagggccactgtatcatctactatgagagaggacacttctgtaacttcagcattaatggc
aaactcctggcacagatggagatcaatgactcaacacgtgccattctcttgagcagcgac
ggtcaaaacctggtaacaggaggtgataacggtgttgttgaagtctggcaggcctgtgat
tttaagcagctgtatatttaccccggctgtgatgcaggaatcagggctatggacttatcc
catgaccagaggactttgatcactgggatggcgtcaggcagcattgtggcgtttaacatt
gatttcaatcgatggcactacgaacatcagaacagatactga
DBGET
integrated database retrieval system
