Labeo rohita (rohu): 127173772
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Entry
127173772 CDS
T09007
Symbol
rbfox3a
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127173772 (rbfox3a)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127173772 (rbfox3a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
127173772
NCBI-ProteinID:
XP_050979676
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Position
12:complement(9472739..9971447)
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AA seq
387 aa
AA seq
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METPSWAETKPGNGLCKTGSIALFGNVVYSGLLNDHFWHFGVPLVTRLGNQEAPAPPEAM
AQPYAPAQYPPPPPQNGLPGEYTHPGQDYTGPSPVPEHAAALTIYTPTQTHSEPPGTDSS
TPSLTGTSSIPQADDVAQTDGSQQLQLQPSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFG
QFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTN
KKVANPYTNGWKLNPVVGAVYGPEFYAVTGFPYPTTGATVAYRGAHLRGRGRAVYNTFRA
VPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAAAAAAAYSDSYGRVYATADPYHH
TIGPAATYSVGTMASLYRGGYSRFTPY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagacccccagttgggcagaaactaaaccaggaaacgggctgtgtaaaacaggaagc
attgctctctttggaaacgtagtgtacagcggactgctgaacgatcacttctggcatttt
ggggtgccccttgtcacaagactgggtaaccaggaggccccagctcccccagaagccatg
gctcagccgtacgctccagcgcagtatcctccccctccacctcagaacgggttgcctggc
gaatacacccaccctgggcaggactacacggggcccagtccggtccctgagcacgccgca
gccctcactatctacacacccacacagacacacagcgagccacctggcactgacagcagc
acgccttccctcacagggactagcagcataccacaagcagacgacgtggcgcagacagac
ggctctcagcagcttcagctccagccctcagactcttcggagaaacagcagcccaaacgg
ttacacgtctccaacattcccttccgcttccgtgacccagacctccggcaaatgttcggg
caatttgggaaaattttggatgtggaaattatttttaacgagcggggctctaagggtttt
ggttttgtaacttttgaaacaagcgcagacgcagaccgtgcacgggagaaattaaacggt
acaatcgtagagggacgcaaaattgaggtaaataatgcaacggcacgagtaatgacaaac
aaaaaagtggccaacccatatacaaacggctggaagctgaatccagtggtgggagctgtc
tatggtcctgaattttatgcagtgacaggcttcccctatccgaccacaggggcgacggtg
gcttacaggggcgcccacttgagaggcagaggtcgtgccgtctacaacacgttccgcgcc
gtgcctccaccccctcccattcctgcttacggagctgtggtttaccaagatggcttctac
ggtgctgagatctatggtggctatgcagcatacagatatgcccaaccagccgcagcagct
gcagcggcctacagtgacagctatggcagagtctatgcaacagcagacccttatcaccac
acaattggacctgcagccacgtacagcgtgggcactatggctagcctttacagaggaggt
tacagtcgcttcacaccctactag
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