Labeo rohita (rohu): 127174235
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Entry
127174235 CDS
T09007
Symbol
pcgf5b
Name
(RefSeq) polycomb group RING finger protein 5-B
KO
K11489
polycomb group RING finger protein 5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127174235 (pcgf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127174235 (pcgf5b)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
127174235 (pcgf5b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-Nse
zf-RING_10
zf-C3HC4_3
Actin_micro
zf-RING_6
TRAF3_RING
zf-rbx1
E3_UbLigase_R4
DUF1272
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
127174235
NCBI-ProteinID:
XP_050980540
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All DBs
Position
12:19650369..19668440
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AA seq
235 aa
AA seq
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MTSHRKHLVRDFNHFITCYICKGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQV
HETNPLEMLRLDNTLEEVIFKLVPGLRDKEEQQEVEFWKRNKSKESPDEDGPMCKKARMD
DDDDVKGDGDYHRSDPQIAICLDCLRNNGQMGENIVKGLMKKFIRCSTRVTVGTIKKFLS
LKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENAYPMVLEYRPRIDFG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacataggaaacacctggtgagggacttcaaccatttcatcacctgttatatc
tgtaaaggatacttgatcaagcccaccaccgtgaccgagtgcttgcacaccttttgtaaa
agctgtatagtccagcattttgaggacagcaatgattgcccaaaatgtggtatccaggtt
catgaaacaaatcccttggagatgttaaggctggacaacactctagaagaagtcattttc
aaacttgtgcctggtcttagagataaggaagagcagcaagaggttgaattctggaaaaga
aacaagtcgaaagaaagtcctgatgaggatggccctatgtgtaagaaggcccgaatggat
gatgatgatgatgttaaaggtgatggagactaccacaggagtgatccacagatagccatc
tgtctagactgcttgcgcaacaatgggcagatgggagagaacattgttaagggcttaatg
aaaaaatttattcgctgctcaacaagagtgactgttggaacaatcaagaagtttttaagt
ctgaagttaaagcttcccagttcttatgagctagatgttctatgcaatggtgagatcatg
ggtaaagaccacaccatggagttcatctacatgacccgctggaggcttcggggagaaaat
gcctacccaatggtacttgaatatcgaccacgcattgactttggctag
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