KEGG   Labeo rohita (rohu): 127174546
Entry
127174546         CDS       T09007                                 
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127174546 (snf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lroh04131]
    127174546 (snf8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lroh04147]
    127174546 (snf8)
Membrane trafficking [BR:lroh04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    127174546 (snf8)
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127174546 (snf8)
SSDB
Motif
Pfam: EAP30 MarR_2 AbiEi_4 CDK5RAP3 Sigma70_r1_1 SelB-wing_3 DUF4896
Other DBs
NCBI-GeneID: 127174546
NCBI-ProteinID: XP_050981000
LinkDB
Position
12:17529394..17533604
AA seq 258 aa
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIAQMSKQLETFKTHLEEFASKHKQEIRK
SSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHHRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIRDSLKWERERACHVLDHLLKEGLAWLDSQAAGEPQYWLPALF
SELLSRDVTPEEANQMTP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcacagaagaggagtcggagctggagcgatcgccaaaaagaaacttgcagaggcaaag
tataaagagagagggactgtccttgctgaggatcagattgcacagatgtcaaaacaactg
gaaacctttaagacccatttggaagagtttgccagcaagcataaacaagaaatccgtaag
agctctcagttcagggtgcagtttcaagagatgtgcgccaccataggggttgatccactt
gcatctggaaaaggattttggtctgagatgcttggagttggagatttctactatgagctt
ggcgtacagatcattgaagtctgtttggccctaaaacacagaaacggcggtctcatcaca
ctggatgaacttcaccaccgtgtcttgaaaggaagagggaagtttgcacaagatgtgagc
caggatgacttggtgcgggccatcaagaagctcaaggctatgggaaatggcttcgggatg
attcccgtcggaggctcttatctagtccagtcggtcccagcagagctcaacatggatcac
actgtcgtccttcagctagcagagaaaaagggctacgtgacagtgagcgagatcagagac
agcctcaagtgggagagagagcgggcctgtcacgttcttgatcacctgctgaaagaaggc
ttagcgtggctggactcccaagctgcgggggagccacagtactggctgcctgctctgttc
tcggagctgctatcgcgagacgttacgcctgaggaggccaaccaaatgacaccttga

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