Labeo rohita (rohu): 127174546
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Entry
127174546 CDS
T09007
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127174546 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127174546 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127174546 (snf8)
Membrane trafficking [BR:
lroh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
127174546 (snf8)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127174546 (snf8)
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Gene cluster
GFIT
Motif
Pfam:
EAP30
MarR_2
AbiEi_4
CDK5RAP3
Sigma70_r1_1
SelB-wing_3
DUF4896
Motif
Other DBs
NCBI-GeneID:
127174546
NCBI-ProteinID:
XP_050981000
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All DBs
Position
12:17529394..17533604
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AA seq
258 aa
AA seq
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MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIAQMSKQLETFKTHLEEFASKHKQEIRK
SSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHHRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIRDSLKWERERACHVLDHLLKEGLAWLDSQAAGEPQYWLPALF
SELLSRDVTPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaagaggagtcggagctggagcgatcgccaaaaagaaacttgcagaggcaaag
tataaagagagagggactgtccttgctgaggatcagattgcacagatgtcaaaacaactg
gaaacctttaagacccatttggaagagtttgccagcaagcataaacaagaaatccgtaag
agctctcagttcagggtgcagtttcaagagatgtgcgccaccataggggttgatccactt
gcatctggaaaaggattttggtctgagatgcttggagttggagatttctactatgagctt
ggcgtacagatcattgaagtctgtttggccctaaaacacagaaacggcggtctcatcaca
ctggatgaacttcaccaccgtgtcttgaaaggaagagggaagtttgcacaagatgtgagc
caggatgacttggtgcgggccatcaagaagctcaaggctatgggaaatggcttcgggatg
attcccgtcggaggctcttatctagtccagtcggtcccagcagagctcaacatggatcac
actgtcgtccttcagctagcagagaaaaagggctacgtgacagtgagcgagatcagagac
agcctcaagtgggagagagagcgggcctgtcacgttcttgatcacctgctgaaagaaggc
ttagcgtggctggactcccaagctgcgggggagccacagtactggctgcctgctctgttc
tcggagctgctatcgcgagacgttacgcctgaggaggccaaccaaatgacaccttga
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integrated database retrieval system