KEGG   Labeo rohita (rohu): 127175229
Entry
127175229         CDS       T09007                                 
Symbol
abcc2
Name
(RefSeq) LOW QUALITY PROTEIN: canalicular multispecific organic anion transporter 1
  KO
K05666  ATP-binding cassette, subfamily C (CFTR/MRP), member 2
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    127175229 (abcc2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lroh02000]
    127175229 (abcc2)
Transporters [BR:lroh02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    127175229 (abcc2)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 MMR_HSR1 AAA_21 nSTAND1 RsgA_GTPase AAA_29 AAA_22 DO-GTPase2 MeaB TsaE DUF87 cobW Dynamin_N
Other DBs
NCBI-GeneID: 127175229
NCBI-ProteinID: XP_050982128
LinkDB
Position
13:876281..899041
AA seq 1568 aa
MSAILDEYCGSIFWNASYLERPDPDLPICVERTVLVWLPLAFLWLSTPWHFVXIFCKKAA
KAPLSKLYIGKQVVAGLLFLTAIAELALTLGEDYGPSSDSTAQKHPAVLYTNPVLFAVSW
IVVMLCQESVRRRQKSVDSGSLFLFWLLQVVCAVFQFQTLLRDALNKDEIADLPRFCLFY
ISYGLQLIAFVLSAIADVSPEVKQMSKTNPEAKATFLSRITFNWFNSMVIKGFKRPLVQE
DMWDLNEEDSTQTICQQFQDVMANELKKARTRLQQKQNKRKTKTDHQNGLAKGVSQDVLV
MEETGKKKEKKKKKKQDSESDYPDSWLVPSIAKTFKGVLLVSAFYKLIQDLLSFASPQIL
KLMISFTQDKSSYAWTGYLYAVLLLVVAFFQSVVLQQYFQQCFSLGMKVRTALMAAVYKK
ALVVSNDSRKESTAGEIVNLMSADAQRFNDVTNFIHLLWSCPLQIVLSIAFLWIELGPSV
LAGLLAMVLMVPINGWLATKSRGFQMENMKFKDSRMKIINDILNGIKVLKYYAWESSFEA
QVQEIREKELKVMRKFAYLSSVSTFIFSCAPAIVSLATFAVFVSVSPDNILDAEKAFTSI
SLFNILRFPLAMLPQLISIMVQTTVSKKRLEKFLSGDDLDTMAVSHDDSHSAAVSITEGT
YAWERDTEPVLKNVSLDVNRGQLVAVVGAVGSGKTSLISALLGELHSLKGHINIKGSVAY
VPQQAWIQNATLKDNILFGSNLEEERYQSVVDACALGPDLDLLPGRDQTEIGEKGINLSG
GQKQRVSLARAVYSSSDVYLLDDPLSAVDSHVGKHLFERVIGPKGLLKDKTRILVTHGIS
FLPYVDEIVVLVNGAVSEVGSYDGLRASKGAFSEFLETYAKEESSNASARKASAQESDYE
QIDMLPEGFEPQADDSPEDIVSNTLKRENSLRHSQRHSKQNGSVKVRKNSSVRSKKDSGD
KKGQRLIEKEAMETGRVKFSVYLQYLRSMGWCYVTWSFMFYFIQNVAVIGQSLWLSDWTE
DSVEYFNTTYPNHIRDMRIGVFGALGLAQGFLVFFGTILLADGSISASRTLHTNLLSNIL
KVPMMFFDTTPSGRIVNRFAKDIFTVDEMIPMSFRSWILCLLGVVGTLFVICLATPIFTA
VVVPMAVVYYFVQRFYVATSRQLRRLDSVSRSPIYSHFGETVSGLSVIRAYGHQQRFLKQ
NEDTIDQNLKSVYPWIVSNRWLAMRLESLGNLVVFFAALFAVISRDSLNSGLVGLSISYA
LNVTQTLNWLVRMTSELETNIVAVERVREYAEIQNEAAWLTTNRPPDDWPSAGNIRFENY
KVRYRPELELVLQGITCDIKTTEKIGIVGRTGAGKSSLTNCLFRIIEASEGLILIDGIDI
ATLGLHDLRSRLTIIPQDPVLFSGTLRINLDPFEKFSDEEIWNVLELAHLKDYVGGLPTG
LQHEVSEGGENLSVGQRQLLCLARALLRKSRILILDEATAAVDLETDDLIQNTIRREFSH
CTVLTIAHRLNTILDSSRVMVLDAGKIVEFDSPSVLLNNKQGHFYAMAKDAGIKVTEKST
PNSVSTNL
NT seq 4707 nt   +upstreamnt  +downstreamnt
atgtctgctattctagacgaatactgcggatccattttctggaatgcctcgtacctggag
cgcccggacccggatctgccaatatgcgtggagcgaacggtgctggtgtggcttccgtta
gctttcctgtggctttccactccgtggcactttgttnnaatcttctgcaagaaagcagcc
aaagctccgctctcaaaactgtacatcggcaaacaggtcgtggctggcctgctgtttttg
acagcgatagcggagctggcactcactctcggtgaagattatgggccgtcgagcgattcc
acagctcaaaaacatccagcggtgctctacaccaatccggttctgtttgccgtctcatgg
atagttgtgatgctgtgccaggagtctgtgcggcgcagacagaaatctgtggactccggg
agtctcttcttgttctggctgcttcaggtggtgtgtgccgtcttccagttccagacctta
ctgagagacgcactgaacaaggatgaaatcgccgatcttccgcggttctgcctgttctac
atcagctatggactgcagctgatcgcttttgttttatcagccatcgctgatgtttcacct
gaagttaaacaaatgtcaaaaacgaatcccgaggctaaagcaacgtttctcagcagaatc
acctttaactggtttaacagcatggtgatcaaaggctttaagaggcctctggttcaggag
gacatgtgggatctgaatgaggaggactccactcagaccatctgtcagcagtttcaggat
gttatggcaaacgagctgaaaaaagcccgcaccaggctacagcagaaacaaaacaaacga
aagactaagactgatcatcagaacggcttggccaaaggagtcagtcaagatgttctagtt
atggaggagacaggaaagaagaaagagaagaagaagaagaagaaacaggattcagaatca
gactatcctgattcctggctggttccctccattgctaaaaccttcaaaggtgtgctttta
gtgtctgccttctacaaactgatacaagaccttctgtcatttgcaagcccacagattctc
aagttaatgatctccttcactcaggacaaatcaagttacgcatggaccggttacctgtat
gcggtgctgcttttggtggtggcttttttccagtcggttgttctacagcagtatttccag
cagtgttttagcctgggtatgaaagtacgcacagctctcatggctgctgtttataagaag
gcattggtcgtatctaacgactcgaggaaagagtcgaccgctggagagatagtcaacctg
atgtcagcggacgcccaaagatttaacgacgtcaccaacttcatccatttgctgtggtcg
tgtccgctgcagatcgttctgtccatcgctttcctctggatcgagctgggtccctctgtc
ttggccggtctgttggccatggtgctgatggtgcccatcaatggctggttggccaccaaa
tccaggggcttccagatggaaaacatgaaatttaaagactcgcgcatgaaaattatcaat
gacatattgaatggaataaaggtgctgaagtattacgcctgggaatcatcttttgaggct
caggttcaggaaattcgagagaaggagctgaaagtgatgaggaagtttgcctacctgtca
tctgtgtccaccttcatattttcatgtgctccagctattgtctctctggcgacctttgct
gtatttgtgtctgtgagtcctgataacatcctggatgcagaaaaggcttttacttccatt
tcactctttaacatactgcgcttcccactggccatgcttccacagctcatttccatcatg
gttcagaccactgtctctaagaaaagacttgagaaatttctgagtggcgacgatctggac
acaatggcagtatcgcatgacgacagccacagtgccgccgtgagcattactgaaggcaca
tatgcctgggaaagagacacagaaccagttctgaaaaatgtgtctctggacgttaatcgg
ggtcagctggtggcagtggtcggggctgtggggtctggaaagacgtcgctgatatctgct
ctcctgggagaactgcacagcctcaagggtcacattaatatcaaagggtctgtggcgtat
gtgccgcagcaggcgtggattcagaacgccactctgaaggacaacatcctgttcggctct
aatctggaggaggagcgttaccagtctgtggtggatgcgtgtgcgctcgggccagacctg
gatcttctgccaggaagggatcaaactgagattggagagaagggcatcaatctgagtggt
ggacagaaacagagggtgagtctggccagggcagtttacagctcctcagacgtgtacctt
ctggatgacccactgtctgctgtagactcacatgtgggaaaacatctgtttgaaagggtg
atcggacccaaaggactgctcaaagataagactcgaattctggtaacacatggaatcagc
ttcctgccgtatgtagatgagattgttgtattggtaaacggggctgtgtctgaggtagga
tcatacgacggtcttcgagccagtaaaggagctttctctgaattcctagaaacgtacgcc
aaagaagaaagcagcaatgccagtgccagaaaagcatcagctcaggagtcagactacgag
cagattgacatgctgccggagggttttgagccacaggctgatgactctcctgaggacatt
gtctcaaacacactaaagagagaaaacagcttgcgtcacagccagcggcacagcaaacaa
aatggaagtgtgaaagtgaggaaaaacagctctgttcgatccaaaaaagactctggtgat
aagaagggacagcgactgattgagaaagaggcaatggagacaggaagggtcaaattctca
gtgtaccttcagtatttgagatctatgggctggtgttacgtcacctggagtttcatgttc
tacttcatccagaatgtggccgtcattggtcaaagcctgtggctcagtgactggactgag
gattctgtagaatatttcaacacaacctacccaaatcatatcagagacatgagaataggt
gtctttggagccctgggattggcccaaggttttctggtgttttttggcactatactccta
gccgacggatccatttctgcatccaggactttacatacaaatctgctgtctaatattctg
aaagtacccatgatgttctttgataccacaccttcaggaagaatagtcaatcgttttgct
aaggatatatttacagtggatgagatgatcccgatgtccttcagatcctggattctctgt
cttcttggagttgtagggaccttgttcgttatttgtttggctactccaatcttcaccgca
gttgttgtgccaatggctgttgtctactactttgtccagaggttctatgttgctacatcc
aggcaactcagacgactggactctgtatcccgatctcccatatactcacactttggagaa
acggtatcaggcctctctgtgataagggcgtatgggcaccagcaacgtttcctaaagcaa
aatgaggacaccattgatcagaatctcaaaagtgtctatccttggattgtttctaatagg
tggttggccatgcgtttggagtcactggggaatctggtggtgtttttcgcagctttgttt
gctgtgatctctcgtgactctttaaatagtggactggtcgggctgtccatctcatacgcc
ttaaatgtgactcaaactttgaattggcttgtcagaatgacatcagagttggagaccaac
atcgttgctgtggaaagagtgagggagtacgcagagatccaaaatgaggctgcgtggctc
accactaatcgtcctccagatgactggccctctgctgggaatatccgatttgaaaactac
aaagtgcgataccggccagaattggagctcgttctccagggaatcacatgtgacattaaa
accactgagaagattggcattgttggtcgaactggtgcaggcaaatccagtctgaccaac
tgtttgtttcgcattattgaagctagtgaaggtctaatcctcatcgatggtattgacatc
gccacactggggcttcatgatctcaggagcagacttaccatcattccacaggacccagta
ctcttctctggaactctgcggataaacctggacccttttgagaagttcagtgatgaggag
atatggaacgttctggagctggctcatctcaaagattatgtcgggggtttgccaacagga
cttcagcacgaggtctcggagggtggagagaatttaagtgttggtcagaggcagctgctg
tgtctagctcgggccttgctcaggaaatcccgtatactcatcctggatgaagccacggcg
gccgtggatctggagacagacgatctcatccagaacaccatccgcagagagttttcccat
tgtactgtgctcaccattgcacacaggctgaacaccattttggacagttcacgggtaatg
gttctggatgctggtaaaattgtggagtttgattcacccagtgtattgcttaacaacaaa
cagggacatttctatgcaatggctaaggatgctggaatcaaagtgacggaaaagagtaca
cctaatagtgtttctactaacctatga

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