Labeo rohita (rohu): 127176264
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Entry
127176264 CDS
T09007
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127176264 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127176264 (pitx2)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
127176264 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4
Motif
Other DBs
NCBI-GeneID:
127176264
NCBI-ProteinID:
XP_050983802
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All DBs
Position
14:11175261..11186086
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AA seq
314 aa
AA seq
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MTSMKDPLSLDHHHHNHHITGSKHTPLTMASSLQPLQRSVDSKHRLEVHTVSDTSSPESV
DKEKGQSKNEDSTDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTN
LTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNWAAKG
LTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLN
NLNNLSNPSLNSGVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPA
SNLSACQYAVDRPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacctctatgaaggatccgttgagtttggaccaccatcaccacaatcaccacattacc
gggagtaaacacacgccgcttacgatggcctctagtctgcaaccgcttcagcggtctgtg
gactcgaaacacagactggaggtacacacggtttcagacacctccagtccagagtccgta
gataaagagaagggacagagtaaaaacgaagattcaactgatgacccgtcgaaaaagaag
agacagaggcggcaacgaacgcattttactagccaacagctccaggaactggaggccact
tttcagcggaatcgctatccggacatgtccactagagaggagatcgctgtttggactaat
ttaacagaggccagagtcagagtgtggttcaagaatcgacgggcgaaatggagaaaaagg
gagaggaaccaacaggcagagctgtgtaaaaacggtttcgggcctcagttcaacggactt
atgcagccctacgatgacatgtaccccagctacacgtacaacaactgggctgcaaagggg
ctcacctcggcctctctgtctaccaaaagcttcccctttttcaattccatgaacgtcaat
ccgctgtcgtctcagaccatgttctccccacctaactccatctcttcaatgagcatgtcc
tccagtatggttccgtctgctgtcaccggcgtacccggatcaagcttaaacagcctcaat
aacttgaataacctcagcaacccctctctaaattcgggggttcccacgccggcgtgccct
tacgccccaccgacgcctccgtatgtttaccgggacacttgtaactccagtcttgccagt
ctgagactgaaagccaagcagcactcgagttttggatacgcgagcgtgcagaacccggcc
tccaatctcagcgcctgccagtacgcagtggatagaccggtgtaa
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