Labeo rohita (rohu): 127176508
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Entry
127176508 CDS
T09007
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
lroh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127176508 (syvn1)
04120 Ubiquitin mediated proteolysis
127176508 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127176508 (syvn1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127176508 (syvn1)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127176508 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
127176508
NCBI-ProteinID:
XP_050984175
LinkDB
All DBs
Position
14:complement(4688651..4698866)
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AA seq
618 aa
AA seq
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MVRAALVTATSLVLTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPAPAAPANAP
VPQPVNVAPGMMPQFPPGLFPFWGPFPGAPPPAAPGAQAATDAPQTSTAGTQPQGADSGA
SSSTQPNADSASAAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMSEA
ELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSETNAGETSTSV
NVESSSSTGNTEIPSQENEAQSDASVNGATGFSPPDSTTGVDNDRKEGDEDEDDGEPNAA
ELRRRRLRKLETANTSDH
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctcttgtgacagccaccagtttggtgctgactggcgcagtggttgct
catgcctacttcctcaagcaccagttttacccgactgtggtatacctcactaaaagcagc
cctagcatggcagttttgtacattcaggctttcgttttggttttccttttggggaaatta
atgcggaaggtgtttttcgggcaactgagagctgctgaaatggagcatctgattgaacgc
tcctggtatgcggtgactgagacctgtttagcatttacagtcttcagggatgatttctct
cctcgctttgtggcccttttcactttgctgctcttcctcaagtgcttccactggctggct
gaagacagagtggactttatggaaaggagtccaaacatctcatgggtcttccacttcaga
gttctctctctaatggtgttgctgggagtgttagactttctgtttgtcaatcatgcgtgt
catagcattataacaagaggagcgtcagtgcagctggtgtttggatttgagtatgcgatt
ctgatgactatggtcctcaccaccttcatcaagtacaccttacatacaattgacctgcag
agtgagaatccatgggacaataaagccgtctacatgctgtacacagagctctttacaggt
ttcatcaaggtgcttttgtatatggcgttcatgaccataatgataaaagtgcacaccttc
cctctgtttgccattcgacccatgtatctcgcaatgaggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaatatgaatactctctatccagatgcaacc
cctgaagacttgcaagccaccgacaacgtgtgcatcatttgcagagaagagatggtgact
ggagccaaaaaactgccgtgcaaccacatatttcactcaagttgtcttcgctcatggttc
caaagacagcagacgtgtccgacctgtcgtatggacgtcctccgagcatctcagccaaac
cagactcctgctccagctcctgcacaagcacccgcccctgctgctcctgctaatgctccc
gtgcctcaacctgtcaatgttgctccaggaatgatgcctcagtttcctccaggcctcttt
cccttttggggtcccttcccaggcgcacctcctcctgctgctccaggtgcacaagcagct
actgacgctccacagaccagcactgctggaacgcagccacagggagcagattcaggagcg
agcagctcgacccagccgaatgcagacagtgcctctgctgctcctggagcaatgcctgga
ttcccgttttccatgcctccacctttcccatcagctccatggctgccgatgcctccacct
ccaccctttatgtcatccatgccgccgccaccgtcgactctgtccaccatgtcagaggcc
gagctcagagaactggagcaggaaggcaggcgaggtttggaagccaggttgcagtgcctt
cacaacatccacacattgctggatgccgccatgctcaacattcaccactacctcagcacg
gtggctacgttaagtcctcctagatcagaaaccaatgctggagagacgagtacatcagtg
aatgtggaatcctcttcctccacgggcaacacggaaattcccagtcaggagaacgaggct
cagagcgatgcatctgtaaatggagctacaggcttttctccaccagattcaactacagga
gtggacaatgacaggaaggagggagacgaagatgaagatgacggtgagccaaatgctgct
gaattgagacgacgtcgcctgcgtaaactggagaccgccaacacttctgaccactga
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