Labeo rohita (rohu): 127178422
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Entry
127178422 CDS
T09007
Symbol
ubqln4
Name
(RefSeq) ubiquilin-4
KO
K04523
ubiquilin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127178422 (ubqln4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127178422 (ubqln4)
03051 Proteasome [BR:
lroh03051
]
127178422 (ubqln4)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
127178422 (ubqln4)
Proteasome [BR:
lroh03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
127178422 (ubqln4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
STI1-HOP_DP
Rad60-SLD
UBA
Ubiquitin_5
YukD
Rad60-SLD_2
HOIP-UBA
CUE
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
127178422
NCBI-ProteinID:
XP_050987246
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All DBs
Position
16:complement(5398263..5405142)
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AA seq
598 aa
AA seq
DB search
MAENSGTDPAVETNTEENAAASATIIKVTVKTPKDKEEIAIAEDSSVAQFKEEISKRFKA
KQDQLVLIFAGKILKDGDTLGQHGIKDGLTVHLVIKTAQKTSGGGSSQTSASSGPGPSQG
NATGTANPSPAGNLGTPQGSGPSPTPTQPPNILAGFGDLSGLANLGMGSANFMELQQQMQ
RQLMSNPEMLSQIMENPLVQSMMSNPDLMRQMIVANPQMQQLMERNPEISHMLNNPELMR
QTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPF
SALGGNTDNPGTQPSRTENREPLPNPWGPPDTAATTTSGTATTTSSTTSSTTPSVSNPLG
ISSSSLGNGMFNSPGMQSLMQQISENPQLMQNMLSAPYMRTMMQSLAQNPDIASQVLMNN
PLFAGNPQLQEQMRAQLPVFLQQMQNPEALSVMTNPRAMRALMQIQEGLQTLQTEAPGLM
PSLIPGGMAAGIPGAPLPTGVNVTPENPPPSGQGPAPTPIPTPAAGTNTAQQQLMQQMLQ
MFAGGNASTQTPEVRFQQQLEQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaatagcggcacggatcctgccgtggagacgaacactgaggaaaatgccgcc
gctagcgcgactatcattaaggtcaccgtcaaaacaccgaaggataaagaagaaatagcc
atcgctgaggattcatctgtcgcacagtttaaagaggaaatttccaaaagatttaaggcg
aagcaggaccagttggttctgatttttgctggtaagatcctgaaggatggagacacgctt
ggtcagcatggcattaaagacgggctcacggttcacctggtcatcaaaacagcacaaaag
acttcaggtggtggtagttcgcagacctctgcctcttctggccctggaccatcgcagggc
aacgccactggaaccgctaaccccagcccggccggtaacctgggcacaccccagggcagt
gggccgtccccaaccccgacacagccacctaatatactagctgggtttggtgacctctcg
ggcctggctaaccttggtatgggatctgccaacttcatggagcttcagcaacagatgcag
cggcagctcatgtccaaccctgagatgctgtctcagatcatggagaacccgcttgtgcag
agcatgatgtctaaccctgacctgatgaggcagatgatagtggccaacccacagatgcag
caactaatggagcgcaacccagagatttcacacatgctcaataacccagagctcatgaga
cagacaatggagttggcacgaaacccagccatgatgcaagagatgatgcgtaaccaggac
cgggcgcttagcaacctcgagagtattcccgggggttacaatgctcttcggaggatgtac
acagatattcaagagcccatgtttagtgctgcacgtgaacagtttggaaataaccccttc
tcggcattgggtggaaatactgataaccctggaacgcagccctccaggacagaaaaccga
gagcccctgccaaatccctggggtccccctgacactgccgccaccaccacctctgggacg
gctaccaccaccagctccaccacaagctcaaccacacccagtgtgtccaaccctctgggc
atcagctcctctagccttggaaacggtatgtttaacagtcctggcatgcagagcctaatg
caacagatctctgaaaaccctcagctcatgcagaacatgctttctgcaccttatatgcgc
accatgatgcagtccctggcccagaatcctgatattgcctcacaggtattgatgaacaac
cctctctttgccggaaatccacagctgcaggagcaaatgagagcgcagttacctgtgttt
ttacagcagatgcagaacccggaagccctttctgtcatgacaaatcctcgagccatgcga
gccctaatgcagatccaggagggactgcaaacccttcaaaccgaagcccctggtctcatg
cccagtctgatacctggtgggatggctgctggtatccctggtgccccactgcccacaggg
gtgaatgtgacccctgagaaccctccgccctcaggccagggccccgcccccacccccatc
cccacccctgctgctggaacaaacaccgcccagcagcagctcatgcaacagatgctacag
atgtttgctggagggaatgcatcgactcagactccggaagtgcgtttccagcaacagctg
gagcagctgagtgccatgggcttcatcaacagggaagccaaccttcaggccctcatcgcc
accgggggtgacatcaacgccgccatcgaaagactgctcggctctcagccttcctaa
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