Limosilactobacillus reuteri SD2112: HMPREF0538_20060
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Entry
HMPREF0538_20060 CDS
T01551
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_20060 (sbcD)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0538_20060 (sbcD)
Archaeal homologous recombinant proteins
HMPREF0538_20060 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
RB_A
Motif
Other DBs
NCBI-ProteinID:
AEI56274
UniProt:
F8DRP0
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All DBs
Position
complement(61930..63048)
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AA seq
372 aa
AA seq
DB search
MRFLHTADWHIGKTLNDFSLLDDQLATFKQIEAIAKDQQVDAIVIAGDLYDRSVPNEAAV
KLLNQMLQDLNLTDHFPLLAISGNHDSAVRLSTGTDWFAYQSFFLNTDINNAFTPVTIKN
TQFFLLPFFGIQEVRNYFNDDKIKNVNDAMGRITTEMEKHFAPDKRHVLVAHFFAAGSKR
TADSETLIEVGGLSAVTTDVLAPFDYVALGHLHNRNALNDEKIKYSGSPMKFSVSEAKQE
KGVWIVDTAPFKAEWVPLSPAHDIHLLKGSFTELATKPEEALREDFYDIELTDQERIPDV
LNKLREYYPKIISLHRTHQAKQVQLNLSKKRAQESPLDLLADFYSQTMGNDLTDRQKKWA
EKALTQIMKGEE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttttacatacggctgattggcatattggcaagacattaaacgattttagcttg
cttgatgatcagctagcaacctttaagcagattgaagcaattgccaaagaccagcaagtt
gatgcgatagtgattgcgggagatttatatgatcggtccgtgcccaatgaagcagcggtt
aagctcttaaaccagatgctgcaagacttaaacttgactgatcattttcctttactggca
atcagtgggaaccatgattcagcggtccgtttaagtacggggaccgattggtttgcttac
cagtcatttttcttaaacactgacattaataatgcttttaccccggtcacaatcaaaaat
acccaatttttcttattgccattctttgggattcaagaggttcgcaactactttaatgat
gacaagattaaaaatgtcaatgatgcgatggggcggattacaactgagatggaaaagcat
tttgctcctgataaaaggcatgttcttgtcgcccatttctttgcggctggaagtaagcga
acggctgattctgaaactttgattgaggttggcggattgagtgcagtcacgacagatgtt
ttagctccctttgattatgttgctcttggtcaccttcataaccgcaatgctttaaatgac
gaaaaaattaagtatagtggctcaccaatgaagttttcagtatcggaagccaagcaagaa
aaaggcgtttggattgttgatacagcaccttttaaggccgaatgggttccactatcgcca
gctcatgatattcaccttttgaaagggagttttactgaactggctacaaaacctgaagaa
gcattacgggaagatttttatgacattgaattgaccgaccaagaacgaatccccgatgta
ctaaacaagttacgcgaatattatccgaagattatcagccttcaccggacacatcaggcc
aagcaggttcaactcaaccttagtaaaaagcgtgctcaggaatcaccccttgatttactt
gcggatttttattcccaaacgatgggaaatgatttaactgaccgccaaaagaagtgggca
gaaaaggccttgactcaaatcatgaaaggggaggaatag
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