Limosilactobacillus reuteri SD2112: HMPREF0538_20234
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Entry
HMPREF0538_20234 CDS
T01551
Name
(GenBank) RNA methyltransferase, TrmH family
KO
K03437
RNA methyltransferase, TrmH family
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lru03016
]
HMPREF0538_20234
Transfer RNA biogenesis [BR:
lru03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
HMPREF0538_20234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AEI56447
UniProt:
F8DL71
LinkDB
All DBs
Position
complement(225488..226264)
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AA seq
258 aa
AA seq
DB search
MEQLTSIHNQHVKDWKKLQTKKARRQTGTYLLDGWHLVQEASKAGIELLEVVGTTEQLAA
HPELEGMANATYEVTEEIMKHITDTVTPQGIAAVVALPDSHRLPAGPLHGAWLFLDRVQD
PGNVGTMVRTADAAGFTGVVVGQRSADLFGPKVVRSMQGSQFHLQMFEGDLRKWIDDFKS
INAPTYGTQLNPQAKNFRTVDPGDTFALIMGNEGQGMSDDLLSQTTDNLYIPMRGEAESL
NVAISAGILMFQLNQNLD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattaacatcaattcacaatcagcacgttaaagattggaaaaagctacaaacc
aaaaaagcacgacgccagactggtacttaccttttagatggctggcacttagttcaagaa
gcgtctaaagctggaatcgagcttttagaagtagtggggacaactgaacaattagctgct
catccagaactggaaggcatggctaatgcaacctatgaagttactgaagagatcatgaag
catattactgatacggtaacgccccagggaattgctgcggttgttgctttaccagattct
catcgtttaccagcagggccattgcatggggcatggcttttcctcgaccgggttcaagat
ccaggaaacgtggggacaatggtgcggacagcagatgccgcaggatttactggagtagta
gttggacaacgctcagcagacttatttggtcctaaagttgttcgttcaatgcaaggaagc
caattccaccttcaaatgtttgagggtgacttaagaaagtggattgatgattttaaatca
atcaatgctccgacgtatggaacacaactgaatccccaagccaaaaacttccggactgtt
gatcccggtgatacttttgccttaatcatgggcaatgaaggacaggggatgagcgatgat
cttctttcacagacaactgataacctctatatcccaatgcgtggtgaagccgaatcgctt
aacgtcgctatctctgcaggaatcttaatgtttcagcttaatcaaaatctagattaa
DBGET
integrated database retrieval system
