Lynx rufus (bobcat): 124503146
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Entry
124503146 CDS
T08475
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124503146
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124503146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
124503146
NCBI-ProteinID:
XP_046923940
LinkDB
All DBs
Position
Unknown
AA seq
2717 aa
AA seq
DB search
MIMKIQKKEKQLSSLKVLNHSPMSDASVNFDYKSPSPFDHGTDQEEKIEDVASHCLPQKD
LYAAEEEAETLFPRKMTSHNGMEDSGGGGTGVKKKRKKKDPGEQEGAAKGSKDREPKPKR
KREPREPKEARKAKEPKRAKEPKEPKQKDGVKKARKPREASGTKEAKEKRSGVDSAARTK
SKKASKEQGPTPVERKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDYMEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTEGTSDIPERGNTDKEDNTEDKLDGLQKQMESSSDGGDGIFGEKKDDSRAAQDG
SDPDKSPWPVPSALTARLRRLVTVYQRCNRKELCRPEVLGPGNQGYWVQEEMFRRTSEMD
LINKEAQKRWTRREQADFYRAVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEHYFY
SFVAMCRNVCRLPTWKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLVGTAKHGLNRTDYYIMTDPQLSFLDAYRNYAQHKR
TDAQAPESLCCLYQTNSRLYESLTYTQMSRTSEPLENEPENLVKIESRDDHLAPPGGSLS
DMTCDNFISKVQDVISITHDESLLPESLESMMYGKKALIREPGSLQESPSTNTEPRKDAL
ALSASKDGNCRPAGHEAEIPSGPSFMSSLEAGVAQMNIKNGKHLLLSLSREGDVCSEAGQ
RPESIGQLEAKHLASPSLDQGNESGFVDMCHLSVCDSRRSLSSDQQLIDLLENKSLESKL
VLSQNHSEEEEEEEENEEENVGVTTGLRERPEVLHLAEPTANILREKSRGLPVDEVKRGS
LEAMNQHPRPQGAFPPAACQCHCKHTERWARGLENEEFEVDKSKGYTPDLYRSKTNSITV
EGEPTAPPSEPFQGKHELSKEPWKENAEGKKGFPAYPEASELKSEDMDFESKDDYDRDGN
SHAQDYPGKYSEEESKSSASGIAGDLGDDLQEARAPTIAQLLQEKTLFSFSEWPKDRVII
NRLDNICHVVLKGKWPSSQQYEPPGTLPTPVLTSSAGSRSSISEPETSEHSFSSGAALVA
QIQKESFLAPVFTKDDQKHRRPYEFEVERDAKARGLDQFSATHGHPPIVLNGWHGESAID
LSCTSEGSPGAASPFPLSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLR
RDDAATRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQAPSSASHPEGPVSAASA
PEPAPAAGSQAEKAIPSKSLLDWLRQQADYSLEVPGFGANFSDKPKQRRPRCKEPGKLDV
NSLSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGPRRRGRRPRSELLKTPAIVA
DSPSGMGPLFMNGLIAGMDLVGLQNMRNLPGIPLTGLVGFPAGFATMPTGEEVKSTLSML
PMMLPGMAAVPQMFGVGGLLNAPMATACTNTAPAPLSSTTKSGTAATEKTVEDKPSSHDV
KTDTLAEDKPGPGPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPA
MQQARHSEAVGLESQKRKKKKTKGDSLNPNPEPAPGSEKEPGGDQNCPEPRAPIPPERGH
VAQAREGGLKDSNSDTN
NT seq
8154 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacaaaagaaagagaagcagttgtcaagtttaaaagttctgaatcac
tctccaatgtctgatgcctctgtcaattttgactacaaatccccctccccgtttgaccat
ggcactgatcaggaagagaagatcgaagatgttgccagtcactgtctgcctcagaaggac
ctgtatgctgctgaagaggaagctgagaccctttttcctaggaaaatgacgtcccataac
gggatggaggacagtggaggaggaggcactggagtaaagaagaaaaggaagaaaaaggac
ccgggagagcaagagggggcagcgaagggaagcaaggacagggagcccaagccaaagagg
aagcgagagcctagagagccaaaggaagcccggaaggccaaggagcccaagagggccaag
gagcccaaggagcccaagcagaaggatggagtcaagaaagcacggaagccccgggaggcc
tcgggtaccaaggaggccaaagagaagaggagtggcgtggactctgcagccaggacgaag
tccaagaaggccagcaaggagcaaggaccaaccccagtggagagaaagaagaaaggaaag
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagtcctgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caggtgaagcgcagaaaatataacgaggacctggatttcaaggtggtggacgatgacggg
gagacaatcgccgttcttggagccggccggacgtccgccctctcggcttctacactggca
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagaccgtccaggaggttcaccccggagagcccccattcgacttggagctattctacgtt
aagtatagaaatttttcctacttgcattgtaaatgggccacaatggaagagctggaaaag
gatcctcgcattgcacagaagatcaagcgattcaggaataaacaagcccagatgaagcac
atttttactgagcctgatgaagacttgttcaacccagactatgtagaagttgatcgcgtc
ctggaggtagcccacaccaaagatgcagaaacaggagaggaggtgacgcattacctggtg
aagtggtgctcactgccttatgaagaaagtacgtgggaactagaggaagatgtggatcct
gcaaaagttaaagaatttgagtctcttcaagttctccctgaaattaagcatgtggagcgg
cctgcttcagactcctggcagaaactggagaagtctcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aattgtattttggctgatgagatggggctggggaaaaccatccagtccatcacattcctc
tcagagatattcctccgaggaatccatggcccttttctcatcattgccccactctccacc
atcacgaactgggagcgagagttccggacgtggacagagatgaatgccattgtgtaccat
ggcagccagatcagcagacagatgatccagcagtatgagatggtgtaccgagacgcacag
ggaaaccccctttcaggagtcttcaagttccacgttgtcatcacaacgtttgagatgatc
ctggcagactgcccagagctgaaaaagattcactggagctgtgtgataattgacgaagcc
cacagactgaagaacaggaactgcaaacttctggagggtctaaagctcatggccctggaa
cacaaagtactgctcactgggacaccgttacagaactctgtggaggagctcttcagtttg
ctgaattttctggagccatcacagtttccttcagagactgctttcttggaggaatttgga
gatctgaaaactgaggaacaggtgaagaaactgcagtctatcctaaaaccaatgatgctt
cggcggctgaaagatgatgtggaaaagaaccttgctcctaaacaggagacgatcattgaa
gtagagctcaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttcc
ttcctgaccaagggggcaaatcaacacaatatgcccaatctcatcaacaccatgatggag
ctgagaaagtgctgtaaccatccctacctgatcaatggggcagaggagaaaattctggaa
gatttccgaaaaacccacagccccgatgcccctgactttcagctgcaggccatgattcaa
gcagcagggaagttggtgctgattgataaactgctccctaagctgattgcaggtggtcac
aaagtcctcatcttctcccagatggtgcgctgcctcgatatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccaga
gcgggaggcctggggatcaatctcacggctgctgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccggataggccagagcaaa
gccgtgaaggtgtatcgtctcattactcggaactcctatgagcgggaaatgtttgacaaa
gccagcctaaagctgggcctggacaaggctgttcttcaggacataaaccgaaagggcagc
accaatggggtacaacagctctcaaaaatggaagtagaggacttgctccggaaaggggct
tatggagccctgatggacgaggaagatgaaggctccaaattctgtgaagaagacatagac
cagattctgcagaggagaacccacaccatcaccatccagtctgaagggaaaggatctact
tttgccaaggctagctttgtggcttcaggaaacaggacagatatttccttagatgaccca
aacttttggcaaaaatgggctaaaatagctgaattggacaccgaagcaaagaatgaaaag
gagagcttagtgatcgaccggcctcgagtgagaaagcagaccaaacactacaactccttt
gaggaggatgagctcatggagttctcggagctagacagcgactcagacgaaaggcccacg
aggtccagacgcctcaatgacaaaaccaggcgctacctccgagccgagtgtttccgggta
gagaagaacctgctcatctttggctggggccggtggaaggacatcctgacccacgggcgg
ttcaagtggcatctgaatgagaaggacatggagatgatttgccgggccctgctggtctac
tgtgtcaagcattacaagggggacgagaagatcaagagcttcatttgggaactgatcaca
cctaccaaagacgggcaggcccagaccctccagaaccactcagggttgtctgctccagtc
cccagagggaggaaggggaagaagacgaagaaccagctgctgctccctgagttgaagaat
gcagactggctggccacctgcaaccccgaggtggtcttgcatgatgacggctataagaaa
cacctcaaacagcactgcaacaaggtccttttgcgagtccggatgctgtactacctaaaa
gctgaaatactgggagaggcagctgataaagcgtttgaaggcacccctgccagggagcta
gacgtacccctgcccgacatcgactacatggagatcccagtggattggtgggatgctgag
gccgataagtcccttctgataggcgtgttcaaacacgggtatgagaggtacaatgccatg
cgagcagacccagcactttgcttcctggagaaagtcgggatgccagatgagaagtctctt
tctgcagaacagggtgttacagaggggacctcagacattcccgagcgaggcaacacggat
aaagaagacaacactgaagacaagttagatggcctgcagaaacaaatggagagttccagc
gatggaggtgatggcatttttggcgaaaagaaagatgacagccgggcagcccaggatggc
tccgacccagacaaatcaccctggccagttccgtctgctctcacggctcggctcagacgt
ctggtcaccgtgtaccagcgctgtaaccgcaaggaactctgccgaccggaagtcctggga
ccaggtaaccaaggatactgggtccaggaagagatgttcaggagaacctcagaaatggat
ctcatcaacaaggaagctcaaaagaggtggactaggagagagcaagcagacttctacaga
gcagtgtcctcctttggggttgtttatgatcaagaaaagaaaacttttgactggacgcag
ttccgcatcatttcccgtttggacaagaagtcggatgagagcctggagcactatttttat
agctttgtggccatgtgccggaacgtctgtcgtctgcccacatggaaagatggtggtccc
ccagatcccagcatctatgtggaacccatcacggaggaacgggccgcgagaaccctttac
cgcattgagctgctgcggaaggtccgagagcaagtgctgaggtgtcctcagctgcacgag
cgcctccagctctgcaggcccagcctctacctcccagtctggtgggagtgtgggaagcac
gaccgagacctgctcgtcggcaccgccaagcatgggctgaaccgcactgactattacatc
atgaccgacccccagctgtccttcctggatgcctacagaaactacgcccagcataagaga
acggacgcccaggcaccagaaagtctctgttgcctttaccagaccaactccaggctgtat
gaatctcttacgtacactcagatgagcaggacttcagagccccttgaaaatgaacctgag
aatctggtgaaaatagaaagtagagatgatcatctcgctccacctggaggcagtttatct
gacatgacttgtgacaactttatttctaaagttcaggatgtcatttccatcacccacgat
gaaagtctgctgcctgagtccttggagagcatgatgtatgggaagaaggctctcattcga
gagccgggctctctccaggagagccccagtacaaacacagagcccagaaaggatgctctg
gccctctcggcaagcaaagatgggaactgccggcctgctggccatgaggcagaaatacct
tcagggccgtcttttatgagtagcttagaagcaggggtagctcagatgaacatcaaaaat
ggaaaacatctgttgctgtctctttcaagggaaggggatgtctgcagtgaggcagggcag
aggcctgaaagcattgggcagctagaagccaaacacttagcttccccttccttggatcag
ggaaatgaaagtgggtttgtagatatgtgccatcttagtgtctgtgattccagaagaagc
ttgtcatcagaccagcagttaattgatttattagaaaacaaaagtttagaaagtaaattg
gttttgagtcagaaccacagtgaagaggaggaggaagaggaagagaatgaggaggagaac
gtaggtgtgaccacaggcctgagggaaaggcccgaggttttgcatctagccgagcccact
gctaatatcctaagggaaaagagccgaggcctccctgtggatgaggtcaagagaggaagc
ctggaggccatgaaccagcatcctagaccacagggggcttttcctccagcagcctgtcag
tgtcactgcaagcacacggagaggtgggcacgtggcctcgagaacgaggagtttgaagtg
gacaaatccaagggttataccccagacctgtacagaagcaaaacgaatagtatcacagtg
gagggtgagcccaccgctcctccatcagagccctttcagggaaagcacgagctgtcaaaa
gaaccttggaaggaaaatgcagaaggcaaaaaaggtttccctgcatatccagaagcaagt
gagctcaagtccgaagacatggattttgagagtaaagatgattacgacagagatgggaac
agccatgctcaagattacccagggaaatactctgaagaggagagcaagagctcagcatca
ggcattgctggagacctcggggatgacctacaggaggctcgggctcccaccattgctcaa
ctgctccaggagaagaccctcttttccttctctgagtggccaaaggatcgcgtgataatc
aaccgcctggataatatctgccacgtggtgttaaaagggaagtggccttccagccagcag
tacgagcccccgggcacactgcccacccctgtgttaaccagcagtgctggttctcgaagc
agcatctcggagccagaaacatcagaacacagcttcagcagtggtgcagcattggtggcc
cagatccagaaggagagcttcctggctccagtattcacaaaggatgaccaaaagcacaga
cggccctatgagtttgaggtggagcgggatgcaaaggcgcggggtctggaccagttctcc
gccacccacgggcacccccccatcgtcctcaatggctggcacggggagtccgcaatagac
ctctcctgcacttcagaggggtccccaggagccgcgtctcctttcccactgagcgccagc
acccctaagatcggggctatcggttcacttcaaggagccctcggcatggacttgtctggg
attctgcaagctggcctgatccatcccgtgacaggacagatcgtcaacggaagcctcaga
agagatgacgctgccacgaggaggaggagagggagacggaaacatgttgaaggagggatg
gacctcatctttttgaaggagcagacacttcaggcaggaatcttggaagtccatgaagac
ccagggcaggcgccctcaagcgcctcacatccggaagggccggtgtctgccgcttcagcc
cctgagccagccccagcagctggcagccaggctgagaaggccattcccagcaagagtctc
cttgactggctgaggcagcaggccgactactccttagaggttcctggctttggagcaaat
ttttcagacaaaccaaagcagaggaggccacgctgtaaggaacctggaaaattagacgtc
aactccctgagtggggaagagagggttcccgctgtccccaaggagccaggactaagggga
tttctcccagaaaacaagttcaatcacaccttggccgagcctgttcttcgagatgcgggc
ccccgaaggagggggaggcggcctcggagcgagctcctgaagacccctgccatcgtggcg
gactctccctctgggatggggccactgttcatgaacggactgatcgctgggatggacctg
gtaggactccagaacatgagaaatctgccaggcatccccctcacgggcctggtggggttc
ccggccggcttcgccacgatgcccacgggcgaagaggtcaaaagcaccttgagcatgctg
cccatgatgctgccgggaatggccgcagtgccccagatgttcggtgtcgggggactcctc
aacgcacccatggccactgcctgcaccaacaccgctccagcgcctctgtcaagcacaaca
aaaagtggcacagcagcgaccgaaaagactgtagaagacaagccgagtagccatgatgta
aaaacggacacgttagctgaagacaagcctggtcctggtccgttttctgatcagtccgaa
cctgcaataactaccagtagtcctgtggcttttaacccctttctcatcccaggagtgtct
cctggactcatttacccatccatgtttctgtccccgggcatgggcatggctctgccggcg
atgcagcaggccagacactctgaagcagtaggtctggagagccagaagcggaagaagaag
aaaacaaaaggggacagcctgaaccccaacccagagcctgctcccgggtccgaaaaggag
ccaggcggcgatcagaactgccccgaacccagggcccccatccctccagagagaggacat
gtggcacaggccagggaagggggcctcaaagactccaacagtgacaccaattag
DBGET
integrated database retrieval system
