Lynx rufus (bobcat): 124503588
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Entry
124503588 CDS
T08475
Name
(RefSeq) synaptonemal complex protein 2-like isoform X1
KO
K19529
synaptonemal complex protein 2
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124503588
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
124503588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYCP2_ARLD
SYCP2_SLD
Motif
Other DBs
NCBI-GeneID:
124503588
NCBI-ProteinID:
XP_046924692
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MPIRPDLQQLEKCIDDALRKNDFKPLKTLLQIGVCEDVKIKCSKQFLHKLDDLVCRELNK
KDIQTVSTIFVSFGRCGNNISILGQAGLLTMIKQGLVQKMVAWFEKSKEIILSRGNSKDE
AAINMIEDLLDLLMVIHDTNDEGKRQVAENFIPQICVLVIDSRVNICIQQEALKKMNVML
DKMPQDARTILSDQEMFILMSSMGERILDAGDYDLQVGIVEALCRMTSEKQRQELSCQWF
SMDFIANAFKGIKDSEFETDCRVFLNLVNGMLGDKRRVFTFPCLSAFLDKHELKIPSDEK
LEEFWIDFNLGSQALSFYVAGDNDDHQWEAVTVPEERVQIYSIEVRESKKLLTIILKNTV
KISKREGKELLLYFDASLEIASVTQKIWGANKYREFNRKQGISVAKTSVHIIFDASGSQI
LVPESQISPMEEEIISLKEKRNSQKEFTKPPKCIKNSNQGDRKNSQLGIITPSKRKMSEA
SMIIPGADRYTVRSPILLINTSTPRRGRVKPPLHMMSSAEKPDIPKTSESGVDNAESLTS
RPSEERKSRDNTDKHIKTAKAVEKTENKDTEFLNQNFNKLQDAVPDSQTVGKKDKPVLSG
VLDNICGNKMNSKWSCWTPVASINLCNNKRASTSSGDTFNQGIIVKKLTKQKSSSSTSGD
NCEDTEKVPHKKKTTQHSEIDKVEVGVCKRDSQQQLNHPKRSELKHTENTKQRDWRIESE
TTFKSVLLNKTVEESLIYRKKYILSKDVNTAICDKSPSPRKNVKSHRRSGKGLTSELNSW
DLKQKQMREKSKEKGFTDATESLINQLNKRYKPKDDIKSTRKFKESLIDGGFSNKSDLQL
SKEKVQKKSYRQLKTTFVNVTSECPLNDVYNFNLNGADEPIIKLGIQEFQAEATEACVDN
SIKLVGLRNHDELESSLKTKDKKIVANHKKKNLFSDTDTEYGCDDSKTDVSWLKEPKSKP
QLIDYSRNKNVKKQKSGKSRPSLERGQPRSKMTPNKNTTKKVEETVPDGRTRLPRRAAKT
KKNYKDLSNSESESEQEFSHSFKEKLLEKEENIHSRSKTIKLPKKQKKAFSAESQKDISK
EWKNSSLLKDAERDNSLGLSPVSLSGSPSSIEVMRCNIGIEKITEKDFTQDYDCITKSIS
PYLKTSSPESLNSKYRVGGPIKSPKNSDKNVCARERCSPIPRSFLLGNHSASPLSMSSEG
REQIRCDIPCDSTHVSGPTQHFSRKRMYIEEDNLSNADAVEEEEEGRVYLLPKKLSRTED
TDNHTYKVSESISPLSTNDLSLPAESWESEISGVGMMCEKLNTEFRRKFHIRQKMMDYFA
KQSWKTAQQHLTNMNHQIQEYRIKKLDKFQFIIIEELENFEKDSQSLKDLEKEFVELGEK
IFQKYSAYQKSELQRLHHLKASLDKNVFYNTDYEDAIFTSEMCSMKEDMKVLQEQLLKDT
QEEELLNVRRGLMSLFMAHERNVHV
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgccaataagaccagatctccagcagttggaaaaatgcattgatgatgctttaagaaaa
aatgatttcaaacctttaaaaacacttttacaaattggtgtttgtgaagatgtaaagatt
aaatgcagcaagcaatttttacacaagttggatgaccttgtatgcagggagcttaataaa
aaggacatccaaactgtttcaaccatttttgtttcttttggaagatgtggtaacaatatc
agtatattggggcaagccggacttttaactatgataaaacaaggactagtccagaagatg
gttgcctggtttgaaaaatccaaggagattattctcagtcgaggaaattcaaaagatgag
gcagctataaatatgatagaagacttacttgatcttttgatggtcatacatgacaccaat
gatgaaggtaaaaggcaagtagcggaaaattttatacctcaaatctgtgtcctggttatt
gactcaagagtgaatatttgtattcagcaagaggccctaaaaaaaatgaatgttatgctt
gacaaaatgcctcaagacgccagaacaatactctctgaccaagaaatgtttattctcatg
agtagtatgggagaaaggattttagatgctggagattatgatttacaagtaggtatcgta
gaagcactatgtagaatgacttcagaaaaacaaagacaggaactttcatgtcagtggttt
tcaatggattttattgctaatgcatttaaaggaattaaagactctgaatttgaaacagat
tgcagagtatttctcaaccttgtaaatggcatgcttggagacaagagaagggtctttaca
tttccttgtttatcagcatttcttgataaacatgagttgaaaataccttcagatgaaaaa
cttgaggaattttggatagattttaatcttgggagccaggctctatcattctacgttgct
ggagataatgacgatcatcaatgggaagcagtgactgtgcctgaggaaagagtacagata
tacagcattgaagtgagagaatcgaagaagctactgaccataatcttgaaaaatacagta
aaaattagtaaaagagaagggaaagaattgcttctgtattttgatgcatcattggaaatt
gctagtgtgacacaaaaaatttggggtgcaaataaatacagggaatttaacagaaaacaa
ggtatttccgttgccaaaacatctgtgcatataatttttgatgcaagtggatcacagatt
ctggtgccagaaagtcaaatctcacccatggaagaggaaatcattagtttgaaggaaaaa
cgtaactcccaaaaggaattcactaaacctccaaaatgtatcaaaaacagcaatcaaggg
gacagaaagaatagtcagcttgggataattactcctagcaaaagaaaaatgtctgaagca
tcaatgattattcctggtgcagatagatacactgtgagaagcccaatacttttaatcaac
acatcaacaccacgaagaggaagagttaaaccaccgctgcacatgatgagttctgcggaa
aaacctgatattcctaaaacatccgaaagtggggtggataatgctgaatcacttacatcc
agaccatctgaagaaagaaagagcagagataatacagacaaacatatcaaaactgctaaa
gctgtagagaagacggaaaacaaggacactgaattcctaaaccaaaattttaataaactg
caggatgctgttcctgattcacagacagtgggaaaaaaagataaacctgtgttatctggt
gtgttggacaacatctgtggaaataaaatgaactccaaatggtcatgttggacccctgta
gcaagtattaatctatgtaacaacaaaagagcaagtacttcatcgggagatacattcaat
caaggtattattgtcaaaaaacttactaaacagaaatcatcctcttcaacatctggtgat
aattgtgaagacacagaaaaggtgccgcataagaaaaaaacaacgcagcatagcgaaata
gataaagtggaagtaggagtttgcaaaagagacagtcagcaacaactaaatcatcctaaa
cgttcagagctgaaacacactgaaaataccaagcagagagattggcgtattgaatctgaa
actactttcaaatccgttctcttaaataagaccgttgaggagtctctgatctataggaag
aagtacatattgtcaaaagacgtgaataccgctatttgtgataaaagcccttctcctaga
aaaaatgtgaaaagtcacagaagatcagggaaaggattaacgtctgaacttaattcctgg
gatctgaaacaaaaacaaatgagggaaaagtcaaaagagaaaggatttaccgatgcaaca
gaatccttgataaaccaactcaataagagatataaacccaaggatgacataaagtctaca
agaaaattcaaagagtctttgattgatggtggtttttcaaacaaatctgatctacagctc
agtaaggaaaaggttcagaaaaaaagttataggcaactgaagactacttttgttaatgtt
acttctgaatgcccactgaatgatgtttacaattttaacttgaatggcgctgatgagcct
attataaaacttggaatccaggaatttcaagctgaagctacagaagcctgtgtggataat
tcaataaaattggtaggtttgaggaatcatgatgaacttgaatcttctctcaaaacaaaa
gataaaaaaattgtagcaaatcataaaaagaaaaatctctttagtgatactgacacagaa
tacggatgtgatgacagcaagaccgatgttagctggctgaaggaaccaaaatcaaaacca
cagctgatagactatagcagaaataaaaatgtgaagaaacagaaaagtggcaaatcaaga
ccatcgttggaaaggggacaaccaagatctaaaatgacacccaacaaaaacaccaccaaa
aaggtagaggagaccgttccagatgggagaaccagacttccacgaagagcggcaaaaacc
aaaaaaaattacaaagatctctcaaattcagaatcagagagtgaacaagaattttcacat
tcatttaaagagaaattgctagaaaaggaggaaaatatccattccagaagcaaaaccata
aagctgccaaagaaacagaagaaagccttctctgccgaatcacagaaggatatatcaaaa
gaatggaaaaattcatctctactaaaagatgctgaaagagataatagccttggtttatct
cctgtatctttatctgggagcccatcatctatagaagtcatgagatgcaatataggtata
gagaaaataaccgagaaggattttactcaggattatgactgtataacaaaatccatatca
ccttatctgaaaacttcatcacctgaatctttaaacagtaaatatagagtcggaggtcca
ataaagtcacctaaaaacagtgacaaaaatgtatgtgcacgagaacgttgctcaccaatt
ccacgctccttcttgttgggaaatcattccgcatctccactatctatgtctagtgaagga
agagagcaaatacggtgcgacattccttgtgactctactcatgtatcaggccccacacag
cattttagtcgcaaacgaatgtacatagaagaagataatctaagtaatgctgatgcagta
gaagaggaggaggaagggagagtatacttgcttcccaaaaaactatccagaactgaagac
acagataatcacacttataaagtatctgaaagtatatctccgttatcaacaaatgacttg
tctcttcctgcggagagctgggaaagtgaaatttcaggtgtggggatgatgtgtgagaag
ctcaatacagaatttaggaggaaatttcatatccgccaaaaaatgatggattattttgca
aagcagtcttggaaaacagctcaacaacatctgaccaacatgaaccatcagattcaggag
tacaggatcaaaaaactcgataaattccaattcatcatcatagaggagctggagaatttt
gaaaaagattcacagtctttaaaagatttggagaaggaatttgtggaattgggagagaag
atatttcagaagtacagtgcctatcaaaaaagtgagctgcagaggcttcaccacttgaaa
gcgtcactggacaaaaatgtcttctacaacactgattacgaagacgctatttttacatct
gagatgtgctcgatgaaggaggacatgaaggtgctgcaggaacagcttctgaaggacacg
caagaagaggagcttctcaacgtacgcagaggactgatgtcattattcatggctcatgaa
agaaacgttcatgtgtga
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