Lynx rufus (bobcat): 124520243
Help
Entry
124520243 CDS
T08475
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124520243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lruf04990
]
124520243
Domain-containing proteins not elsewhere classified [BR:
lruf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124520243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124520243
NCBI-ProteinID:
XP_046946941
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISNLKDGGKASQANVRIGDVVLTIDGISAHG
MTHLEAQNKIKGCTGSLNMTLQRASATPKPEPVPVQKGEPKEVVKPVPIPSPAVSKVTST
TNTAYNKAPRPFGSVSSPKVTSIPSPSSAFTPPHATTSSHASPPPVAAVTPPSFAASGLH
ANANLSADQHSSALSAGKPAVNVPRQPTVTSVCSETAQELAEGQRRGSQGDSKQQNGPPR
KHIVERNTEFYHIPTHSDASKKRLMEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESET
ENTKKANNTQETPQQLVPSVASARSMPERQESPAATRPGVAGLTTAAAFKPPGSTNVIKS
PSWQQPNQAALSSGRISNSAASSGAVAPANSARGQPQAHDQGTLVQRAEHIPAGKRTPMC
AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGSLYCELCYEKFFAPECG
RCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICRG
CEFPIEAGDMFLEALGFTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagtgtgtccttggttggcccagctccttggggtttccggctgcaaggt
ggcaaggatttcaacatgcctctgacaatctctaatctaaaagatggaggcaaagcatcc
caggcaaatgtaagaataggcgatgtggttctcaccattgatggaataagtgcacatgga
atgactcatcttgaagcccagaacaagattaagggttgtacaggctctttgaatatgact
ctgcaaagggcctctgctacacccaagcctgagccagtccccgttcaaaagggagaacct
aaagaagtagttaaacctgtgcccattccatctcctgctgtgtccaaagtcacttccaca
accaacacggcctacaataaggcaccacgaccctttggttctgtgtcttcaccaaaagtc
acatccatcccgtcaccatcgtccgccttcaccccaccccatgcgaccacttcatcacac
gcttcccctccacccgtggctgctgtcactcctccctcattcgctgcatctggactgcat
gctaatgccaatcttagtgctgaccagcattcgtctgcactgagcgctggtaaacctgca
gttaatgtcccacggcagcccacagtcaccagcgtgtgttccgagactgctcaggagcta
gcagaggggcagagaagaggatcccagggtgacagtaaacagcaaaatggtccaccaaga
aaacacatcgtggagcgcaatacggagttttatcacataccgactcacagtgatgccagc
aagaagagactgatggaggacactgaagactggcgtccgaggactggaacaactcagtct
cgctctttccgaatcctcgcccaaatcactgggactgaacatctgaaagaatcggaaact
gaaaatacaaagaaggcaaacaacacccaggagactcctcagcaattggtcccatcagta
gcttcagctcggagcatgcctgagagacaggagagcccagcggccactagaccaggggtg
gctggtctcacaactgctgctgccttcaaacctccaggatccaccaacgttatcaaatct
ccaagctggcaacagccaaaccaagcagcactttccagtggaagaatctcaaacagtgca
gcctcatcaggagcagtagcaccagccaactcagccaggggacagccccaggcacatgac
caaggcactttagtgcaaagagctgagcacattcctgcagggaaacgaactccaatgtgt
gcccactgtaaccaggtcatcaggggaccattcctagtggcactggggaaatcttggcac
ccagaagagtttaactgtgctcactgcaaaaatacaatggcctacattggatttgtagag
gaaaagggatccctgtattgtgagctgtgctatgagaaattctttgctcctgaatgtggt
cgatgccaaaggaagatcctgggagaggtcatcaatgccttgaaacaaacttggcacgtt
tcctgttttgtgtgtgtggcctgtggaaaacccattcgtaataatgtttttcatttggag
gatggtgaaccatactgtgagactgattattatgccctttttggtaccatatgccgtgga
tgtgaatttcccatagaggctggcgacatgttcctggaggccctgggctttacctggcat
gacacctgctttgtatgctcagtatgttgcgaaagtttggaaggtcagacctttttctcc
aagaaggacaagccactttgcaagaaacatgctcattctgtgaatttttga
DBGET
integrated database retrieval system
