Lynx rufus (bobcat): 124528396
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Entry
124528396 CDS
T08475
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03022
Basal transcription factors
lruf03420
Nucleotide excision repair
lruf05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124528396
09124 Replication and repair
03420 Nucleotide excision repair
124528396
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124528396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lruf03021
]
124528396
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124528396
Transcription machinery [BR:
lruf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124528396
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124528396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
124528396
NCBI-ProteinID:
XP_046957923
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MESTPSRGGLNRVHLQCRNLQEFLGGLSPGILDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSTEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TAHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQSPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaccccctcaaggggcggactgaaccgagtccacctacaatgcaggaacctg
caggaattcctagggggcttgagccctggcatattggaccgattgtatgggcaccctgcc
acctgtctggctgtgtttagggagctcccctctttggctaagaactgggtgatgcggatg
ctctttctggagcagcctttgccacaagctgctgtagccctgtgggtgaagaaggaattc
agcaaagctcaagaggaaagtacagggctgctgagtggcctccgtatctggcacacccag
ctgctccctggtggtctccagggcctcatccttaaccccatcttccgccagaacctccgc
attgcccttctgggtgggggtaaggcctggtctgatgacacaagtcaactgggtccagac
aagcacgcccgggatgttccctcacttgacaagtatgccgaggagcgatgggaggtggtc
ctgcacttcatggtgggctcccccagtgcagccgtcagccaggacttggctcagcttctc
agccaggctgggctcatgaagagcactgaacctggagagccaccctgcattacgtcggcc
ggcttccaattcctgttgctggacacccctgcccagctctggtactttatgttgcagtat
ttgcagacagcccagagtcggggcatggacctggtggagattctctccttcctcttccag
ctcagcttctctactttgggcaaggattactctgtggaaggtatgagtgattctttgttg
aatttcctgcaacatctgcgtgagtttgggcttgttttccagaggaagaggaaatctcgg
cggtactaccccacacgactggccattaatctctcgtcaggtgtttctggagctgggggt
actgcccatcagccaggcttcattgttgtggaaactaattaccgactgtatgcttacaca
gagtcggagctgcagatcgccctgattgctctcttctcagagatgctttatcgcttcccc
aacatggtggtggcgcaggtgacccgggagagcgtgcagcaggccatcgccagtggcatc
acagcccagcagatcatccatttcctaaggacaagggcccacccagtgatgctcaaacag
tcacctgtgctgccgcccaccatcacggaccagattcggctgtgggagctagaaagggac
agactccggttcactgagggtgtactgtataatcagttcttgtcgcaagtggactttgag
ctgctgctggcccacgctcgtgagctgggcgttctggtgttcgagaactcggccaagagg
ctgatggtggtgaccccggccgggcacagcgacgtcaagcgcttctggaagcggcagaag
cacagctcctga
DBGET
integrated database retrieval system
