Latilactobacillus sakei subsp. sakei: LCA_0039
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Entry
LCA_0039 CDS
T00299
Symbol
tag1
Name
(GenBank) 3-methyl-adenine DNA glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCA_0039 (tag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_0039 (tag1)
Enzymes [BR:
lsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
LCA_0039 (tag1)
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCA_0039 (tag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
CAI54340
UniProt:
Q38ZN7
LinkDB
All DBs
Position
37243..37788
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AA seq
181 aa
AA seq
DB search
MASDNWMNATAELLTYYEQEWGQPEHDDQRLFELLCLETYQAVLSWQTVLAKRAAFRTAF
YQFEIQKVAQMTTTDIDRLLQNPAIIRNRRKLAATVNNAQVVLAIQQEQESFAHYLWAFV
DGQPIVNRPKTWADVPAQSALSVAVSRDMKRRGFQFVGPVTVYSYLQGAGLIDDHPQHLK
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgataattggatgaatgcgacagcagagctgttaacttactacgaacaagaa
tggggccaaccggaacacgatgaccagcgcttatttgaactgttgtgtttggaaacctac
caagcggttttgagttggcaaacggtgctggcaaaacgggcggcttttagaactgctttt
taccagtttgagattcaaaaagtcgcgcaaatgacgacgactgatattgaccgtttatta
caaaatccagcgatcattcgcaaccgacgtaagctagcagcaacggtgaataatgcgcaa
gttgttttagcaattcaacaagaacaggaaagttttgcgcactatctgtgggcttttgtt
gacgggcaaccaatcgttaatcgaccaaaaacgtgggcagacgtccctgcacaatcagca
ttatcggttgcagtgagccgggatatgaagcggcggggcttccaattcgttggtccagtg
acggtttattcttacttgcaaggtgcgggtttaatcgacgatcatccccagcatctgaag
ggatag
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