Litorilituus sediminis: EMK97_05935
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Entry
EMK97_05935 CDS
T05852
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lsd
Litorilituus sediminis
Pathway
lsd00521
Streptomycin biosynthesis
lsd00523
Polyketide sugar unit biosynthesis
lsd00541
O-Antigen nucleotide sugar biosynthesis
lsd01100
Metabolic pathways
lsd01110
Biosynthesis of secondary metabolites
lsd01250
Biosynthesis of nucleotide sugars
Module
lsd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EMK97_05935 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EMK97_05935 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EMK97_05935 (rfbC)
Enzymes [BR:
lsd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EMK97_05935 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Ppnp
Motif
Other DBs
NCBI-ProteinID:
QBG35290
UniProt:
A0A4V0ZFX2
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All DBs
Position
1318407..1318955
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AA seq
182 aa
AA seq
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MEIIDTSIPDVKILEPRIFGDERGFFLETFRDDWFKENVANVTFVQDNHSKSSHGILRGM
HYQLKQAQGKLVRVISGEVYDVAIDMRENSPSFGQSFGTLLSSENKRMMWVPAGFAHGFY
VTSPSAEFVYKCTDYYAPEFEQSVLWNDPALKISWPIKTNEQPLLSEKDKAGKLFKDAQY
YR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaaattatcgataccagcattcctgatgtaaaaatactagagccaagaatatttggc
gatgaacgcggcttctttttagaaacttttcgcgatgactggtttaaagaaaatgtcgct
aatgtaacttttgtacaagataaccatagcaaatcatctcacggcatcttgcgcggtatg
cattatcagctgaaacaagcacaaggaaaactcgttagagtcatttctggcgaagtatat
gatgttgctattgatatgcgtgaaaatagcccaagctttggtcagtctttcggaacatta
ctatcaagtgaaaacaagcgtatgatgtgggttcctgcgggctttgctcacggtttttat
gtcacatcaccatcagctgaatttgtctataagtgcacagattactacgctcctgaattt
gagcaaagtgtattatggaatgatccagcactaaaaattagctggccaattaaaacgaat
gaacagccgctactgtcagaaaaagacaaagcgggtaaattatttaaagatgctcaatac
tatcgttag
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