Leifsonia shinshuensis: F1C12_01855
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Entry
F1C12_01855 CDS
T06806
Name
(GenBank) DUF4981 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse00052
Galactose metabolism
lse00511
Other glycan degradation
lse00600
Sphingolipid metabolism
lse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
F1C12_01855
09103 Lipid metabolism
00600 Sphingolipid metabolism
F1C12_01855
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
F1C12_01855
Enzymes [BR:
lse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
F1C12_01855
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
Glyco_hydro_72
Motif
Other DBs
NCBI-ProteinID:
QNE34009
UniProt:
A0A7G6Y694
LinkDB
All DBs
Position
complement(380581..383535)
Genome browser
AA seq
984 aa
AA seq
DB search
MPSPVHLADTAPSSGALRAPRSWLHSDAPALSLNGDWRFRLSPTADLPDDLAQPELDDDG
WDTLPVPAHWVLHGDGRYGRPIYTNVQYPFPIEPPFVPDENPTGDYRRRFDLPGEWPADA
RVVLRFDGVESLYRVWLNGVEVGSASGSRLAHEFDVTEHLRADGNLLAVRVHQWSAASYL
EDQDQWWLPGIFRDVTLSARPADGIEDVWLRTAFADGAGAILPEVTATEDAFPVTLRLPE
LGVEVVWTAPADVAPVEVGPVEPWTAETPRLYDATVASRGESVTLRLGFRTVEICGDRFL
VNGRRVVFHGMNRHETHPERGRVFDEEHARADLIRMKRFNVNAIRTSHYPPHPRLLDLAD
ELGFWVILECDLETHGFEKAGWRDNPSDDPRWRDAYLDRIRRTVERDKNHPAIVLWSLGN
ESGTGANLAAMSAWVHDRDPERPVHYEGDYTGEYTDVYSRMYSSVPETEQIGTDGSFAPL
LGCTPAQGARQRTKPFLLCEYAHAMGNGPGALDQYEALVDAHPRLHGGFVWEWRDHGILT
RTSDGTPFYAYGGDFGEVVHDGNFVMDGMVLSDDVPTPGLHEFAAVAQPVALAFDGDALV
VTNRRHSASTADLALRWTVEHDGRAATSGTLDLPVLEAGDSTRVPLPAVPVADGAETWLT
VTAELAGDTAWAPAGHVVARAQLDRSAARPPRPAGRILDWREADGTLTLGPAAFEHGRLV
SLAGRAVAGPRLELFRAPTDNDEGSGYGDLALSDASALGVSSAQLWREQGLDRLTHRLVS
VQEAEDGLRTLTRVSAANSVHSVTVQTVWTLTDGVLDLRVDIEPSTGWPSVWPRIGVRFD
LPDRDGVVAGAEWFGTGPLESYPDSTRAAYVGRFRATVAELNVEYARPQETGHRSAVREV
ELGAFGFAALPDGRGRLPGFSLSRHTPQQVAAAGHPHELPESDTTYLFVDAAQHGLGSRA
CGPDVWPESALRPEARTLRLRFRV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtctcccgtccacctcgccgacaccgcaccctcctcgggagccctccgcgcgccc
cggtcgtggctgcactccgacgcccccgccctctcgttgaacggcgattggcggttccgg
ctctcccccaccgccgacctccccgacgacctcgcgcagccggagctggacgacgacggc
tgggacaccctccccgtccccgcgcactgggtcctgcacggcgacggccgctacgggcgt
ccgatctacacgaacgtgcagtacccgttccccatcgagccgccgttcgtgcccgacgag
aatcccaccggcgactaccggcgccggttcgacctcccgggtgagtggcccgcggacgcc
cgcgtggtcctgcgcttcgacggcgtcgagtcgctctaccgggtgtggctgaacggcgtt
gaggtcggctccgcgagcggcagccggctcgcccacgagttcgacgtgaccgagcacctg
cgcgccgacggcaatctgctcgccgtgcgggtgcaccagtggtccgccgcgagctacctc
gaggaccaggaccagtggtggctgcccggcatcttccgcgacgtgaccctctcggcgcgt
ccggccgacgggatcgaggacgtctggctgcgcacggccttcgcggacggcgcgggcgcc
atcctcccggaggtcaccgcgacggaggacgccttcccggtcacgctgcgcctgcccgag
ctcggcgtggaggtcgtctggacggcgcccgccgacgtggctcccgtcgaggtcggcccg
gtcgagccctggaccgccgagaccccgcgcctctacgacgccactgtcgcctcgcgcggc
gagtccgtcaccctgcgcctcggcttccgcaccgtcgagatctgcggcgaccgcttcctc
gtgaacggccggcgcgtggtcttccacggcatgaaccggcacgagacgcaccccgagcgc
ggccgggtgttcgacgaggagcacgcccgcgccgacctgatccggatgaagcggttcaac
gtgaacgccatccgcaccagccactatccgccgcacccgcgcctcctcgacctcgccgac
gagctggggttctgggtgatcctggagtgcgacctggagacgcacgggttcgagaaggcc
ggttggcgggacaaccccagcgacgacccgcgctggcgcgacgcgtacctcgaccggatc
cggcgcacggtcgagcgggacaagaaccatcccgcgatcgtgctgtggtcgctcggcaac
gagtcagggaccggcgcgaacctcgcggccatgtccgcctgggtgcacgaccgcgacccc
gagcgtcccgtgcactacgagggcgattacacgggcgagtacaccgacgtctactcgcgc
atgtactcctccgtcccggagaccgagcagatcggcacggacggctcgttcgcgccgctg
ctcggctgcacaccggcgcagggcgcccgccagcggaccaagccgttcctgctgtgcgag
tacgcgcacgcgatgggcaacggcccgggcgccctcgaccagtacgaggcgctggtggac
gcgcacccgcggctgcacggcgggttcgtctgggagtggcgcgatcacggcatcctcacc
cgcacctccgacggcacgccgttctacgcgtacggcggcgatttcggggaggtcgtccac
gacggcaacttcgtgatggacggcatggtgctgtcggacgacgtcccgacgcccggcctg
cacgagttcgcggccgtggcgcagccggtcgccctcgcgttcgacggcgacgcgctggtc
gtcacgaaccggcggcacagcgcgagcaccgccgacctcgccctgcgctggacggtcgag
cacgacgggcgcgcggcgacctccgggaccctcgacctccccgtgctggaggccggcgac
tcgacgcgcgtgccgctgcccgccgtcccggtcgccgacggcgccgagacctggctcacc
gtgacggccgagctcgccggcgacaccgcctgggctccggccggccacgtcgtggcgcgg
gcgcagctcgaccggtcggctgctcggccgccgcggcccgcgggccgaatcctggactgg
cgggaggccgacggcaccctcacgctcggccccgcggccttcgagcacggccggctggtc
tccctcgccggccgggccgtcgcaggcccccggctggagctgttccgcgcgcccaccgac
aacgacgagggctccggctacggcgacctcgcgctcagcgacgcgagcgcgctcggcgtc
tccagcgcgcagctctggcgcgagcagggcctcgaccggctcacccatcggctggtgtcg
gtgcaggaggccgaggacggcctccgcacgctcacccgggtctccgcggcgaacagcgtg
cactccgtcaccgtgcagaccgtctggacgctgaccgacggcgtcctcgaccttcgggtg
gacatcgagccgtccaccggctggcccagcgtgtggccgcggatcggggtgcgcttcgac
ctccccgaccgcgacggcgtcgtggcgggcgccgagtggttcggaaccggcccgctggag
tcgtacccagacagcacgcgcgccgcgtacgtcggccggttccgcgccacggtggccgag
ctgaacgtcgagtacgcccggccccaggagaccgggcaccgctcggccgtgcgcgaggtc
gagctgggcgcgttcggcttcgccgccctcccggacggccgcggccggctcccgggattc
tcgctctcccggcacacgccgcagcaggtcgccgcggccggccacccgcacgagctgccg
gagtcggacaccacctacctgttcgtggacgccgcccagcacggtctcggctcgcgcgcg
tgcgggccggatgtctggccggagtccgccctccggccggaggcccgcacgctgcggctg
cggttcagggtgtga
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