Leptidea sinapis (Wood White): 126966245
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Entry
126966245 CDS
T09272
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03022
Basal transcription factors
lsin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126966245
09124 Replication and repair
03420 Nucleotide excision repair
126966245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126966245
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126966245
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126966245
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126966245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
126966245
NCBI-ProteinID:
XP_050666163
EnsemblRapid:
ENSLSNG00005020964
ENSLSNG00005020996
LinkDB
All DBs
Position
9:10216497..10261072
Genome browser
AA seq
403 aa
AA seq
DB search
MADDEQDPKEYRWETGYEKTWEAIKEDEDGLVEGLVAEFAQKAAKRAAVARRVPIRLGMM
RHLLVAIDCSEAMSSQDLKPTRFMCTLKLLEKFIEEFFDQNPLSQLGLIGLKNKRAEKLT
ELSGNIRKHVKTVQGLTNLALTGEPSLQNTLELADKVLKPLPGHASRELLVLFASLTTCD
PGDITTTIQTLKTDGIRCSVIGLAAEVRICKKLCQDTGGEYGVVLDDVHYRSLLLEHTSP
PPRARALDAGLVKMGFPHTQPPSTEADATNTDPPITVCMCHVEEGEGVGGDGHLCPQCRS
KYCSLPVQCRTCGLTLASAPHLARSYHHLFPVEPFEELKNEGQSQHCFACTRSFTDLDKQ
IHRCTRCVEYYCWECEGLISSTLHVCPGCASRPHLYQRLPNTS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatgaacaggatcctaaagaatatcgttgggaaacaggctatgaaaaaact
tgggaggcaataaaagaagatgaagatggcttggttgaagggttggtggcggagtttgct
caaaaagctgctaaaagagcagcagtggctcggcgagttccaattcggctaggaatgatg
agacacctccttgttgcaatagattgttccgaggctatgtcatcacaggacttgaaacct
actagattcatgtgtacattgaaattactagaaaaatttattgaagaattctttgatcag
aacccattgagtcaactaggactgataggattgaaaaataaaagggcagagaaacttaca
gagctctcgggaaacattagaaaacatgttaaaacagtgcaaggcttaacaaatctggca
ttaactggggaaccatcactgcagaatacgttagagttggcagataaagtgctaaagcca
cttccaggacatgcctcaagagaacttcttgttctgtttgcgtctctcactacttgcgat
ccaggagatataacaacaactattcagactttaaaaacagatggtatcagatgctctgtt
attggactcgctgcagaagtaagaatatgtaagaaattatgccaagatacaggaggagaa
tatggggtggtgttggacgacgtgcactatcgctcgctgctgctggagcacacgtcgccg
ccgccccgtgcgcgcgctctggacgcggggctcgtcaagatggggttcccccacacccag
cctccctcgaccgaggcagacgccaccaacaccgacccgccgatcacagtgtgcatgtgc
cacgtggaggagggcgagggtgtcggaggagacggccacctgtgtccgcagtgccgcagc
aagtactgctcgctgccggtgcagtgccgcacgtgcggcctgacgctggcgtccgcgccg
catctcgccaggtcgtaccatcacttattcccagttgagccgtttgaggagttgaagaat
gagggacagagtcaacattgttttgcttgcacgaggtcgtttacggacctagataagcag
atacatcggtgtacccgttgcgtggagtactactgctgggagtgcgagggtctgatatcg
tcgacgctgcacgtgtgtccaggctgtgcgtctaggccgcacctctatcagcggctaccg
aacacttcctaa
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