Leptidea sinapis (Wood White): 126967715
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Entry
126967715 CDS
T09272
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03022
Basal transcription factors
lsin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126967715
09124 Replication and repair
03420 Nucleotide excision repair
126967715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126967715
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126967715
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126967715
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126967715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
126967715
NCBI-ProteinID:
XP_050668284
EnsemblRapid:
ENSLSNG00005002049
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All DBs
Position
13:1378474..1392373
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AA seq
476 aa
AA seq
DB search
MSESSKSKSLNLHSTPTLQCKDLHEYLKSRSSHFLETLYNYPTICLAVYRELPELARHFV
IRLLFVEQPVPQAVVASWVSQTHAKEQIKASEALSELSVWNEAPIPGGLPGWFLSHSFKK
NLKVALLGGGRPWSMSQTLEPDGKARDVAFLDAYALERWECVLHYMVGSQQTEGISADAV
RILLHAGLMTRDAEDGSAVITKAGFQFLLLSTAKQVWLFLQHYLHTAEKRNLSSAECLAF
LYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLLYQRKRKAGRFYPTRLALNITCVRDE
AGLAGGGRGVGYIVVESNYRVYGYTQSALQVALLGLFTELMYRFPNLVVGVITRESVRQA
FRGGISAEQIIKYLEQHSHPQMLNTDSAGVAACTSVLPPTVLDQVRLWESERNRFTYTEG
VVYNQFLSQADFVVLRDYARQERVLSWQNERTRTMVVTKPGHDDVKRFWKRYSKSS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtcctcaaaatcaaaatctttgaatctccattcaacccccaccctacaatgt
aaggatttgcatgaatatctgaaaagtcgctcgtctcattttttagaaactctttacaac
tatccgactatatgtcttgccgtatacagagaattgccagaattggctcgacattttgtt
atacgtctcctattcgtagaacaaccagtacctcaagctgttgtagcatcgtgggtctca
caaactcatgcaaaggaacaaatcaaagcaagtgaagcactgtcggaactatcggtgtgg
aatgaggcacctatacctggtggtctgccgggatggttcctatctcactctttcaagaag
aatctaaaagttgcacttctaggaggaggccgtccatggagcatgtcacaaacgttggag
ccggatggcaaagcgagagacgtggcattcctggatgcatatgcgttggagagatgggag
tgtgtgctgcactacatggtgggcagccagcagactgagggcatcagtgctgatgctgtc
cgaatactgttgcatgctgggctcatgactagagatgcggaggatggttcagctgtcata
actaaagctggcttccagttccttctgctcagtacagctaaacaggtgtggctgttcctg
caacactacctgcatacggcggagaagagaaacctaagctcggccgagtgcctggccttc
ctctaccagctcagcttcagcaccctcggaaaggactacagcacggagggcatgagcaac
aacatgctggtgttcttgcagcacctacgcgagtttggtctgctctaccagcggaagcgc
aaggcaggccgcttttaccccacgcggctggcgcttaacatcacgtgcgtgcgcgatgag
gcggggctggcgggcggggggcggggcgtcggctacatcgtggtggagagcaactaccgc
gtgtacgggtacacgcagagcgcgctgcaggtggcgctactggggctgttcactgagctc
atgtacagatttccgaacctggtggtgggagtcataacgagggagagtgtccggcaagcg
ttccgcgggggcatctcagcggagcaaatcataaagtacttggaacaacattcgcacccc
cagatgctgaacactgatagtgcaggcgtggccgcgtgtacatctgtgctgccgcccact
gtgttggaccaggtgcggctgtgggagagtgagcgaaaccgcttcacctacaccgagggt
gttgtctacaaccagttcttatcgcaggctgacttcgtagtgctgcgggactacgcccgt
caagagcgcgtgttgagctggcagaacgaacgcacgcgcacaatggtggtcaccaagccg
ggccacgacgacgtcaagaggttctggaagagatactccaagtcgtcgtag
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