Ligilactobacillus salivarius UCC118: LSL_0488
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Entry
LSL_0488 CDS
T00337
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl03030
DNA replication
lsl03410
Base excision repair
lsl03420
Nucleotide excision repair
lsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSL_0488 (polA)
03410 Base excision repair
LSL_0488 (polA)
03420 Nucleotide excision repair
LSL_0488 (polA)
03440 Homologous recombination
LSL_0488 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsl03032
]
LSL_0488 (polA)
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_0488 (polA)
Enzymes [BR:
lsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSL_0488 (polA)
DNA replication proteins [BR:
lsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LSL_0488 (polA)
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LSL_0488 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSL_0488 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABD99297
UniProt:
Q1WUN8
LinkDB
All DBs
Position
536545..539223
Genome browser
AA seq
892 aa
AA seq
DB search
MVEEKNKLLLIDGNSVTFRAFFALHNSLSRFVNHEGLHTNAIYGFKNMLDSILTKVNPTH
ILVAFDAGKTTFRTEKFTDYKGGRAKTPSELSEQFPEIKNLLEGYGIKTYELKNYEADDI
IGTLAAKAEKKNYDVVVVTGDRDLTQLTTDKITVAVTVKGVSEIEEYTPSHVEEKIGLIP
EQIVDMKALVGDTSDNYPGVTKIGEKTAIKLLKQYGTLDGIYKNIDEMKKSKMKENLIRE
KEIAYLCQDLAEIRKDAPVEIDLEETEWTGKNIEKLVTLYQKLDFRKFLSQLKAESSEQL
DIFESKSNIEFTELTEENLNDIKISDNDEIVFNLEIDGENYHTAEIIGFSIKIGDKYLVS
DDIDLLKKKQIKNLLESDEVEVDLFDGKRQYVGLNRLGVTLSKINFDLLLVSYLLDNSEN
SNDLGLLAQQHEYYDVESDEQIYGKGAKHAVPEDKEVLFEHLVRKVKAINNLKEKLFNEL
EENQQLDLYTKIERPLSIILANMEIAGVKVDSNRLETMQSELKERLSELEQEIYNEAGEE
FNLNSPKQLGVILFEKLKLPVIKKTKTGYSTAVGVLEQLRGMSPIVDNILQYRQLAKIQS
TYIEGLLKVVSKKDGKAHTRYTQTLTSTGRLSSVDPNLQNIPVRLEEGRKIRQAFVPSHP
GWEIFSSDYSQIELRVLAHISKDKNMQEAFKEGMDIHASTAMRIFNVDSPDEVTPNMRRQ
AKAVNFGIVYGISDYGLSQNIGISRKQAKQFIDTYLDTFSGVKDYMEKIVEFAKENGYVE
TIFNRRRYLPDIKSRNFNLRSFAERTAMNSPIQGSAADIIKVAMINMQEMLKEKNLQAKM
LLQVHDELIFEAPTEEIPLLEDMVPKVMDSAVKLDVPLKVESKHGQTWFDTK
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagaaaaaaataaattattattaatagatggaaatagtgtcacatttagagct
ttttttgctttgcacaattctttaagtagatttgtaaatcatgaaggattacatactaat
gcaatttatggatttaagaatatgttagatagcatcttaactaaggttaaccctacacat
atattagtagcatttgatgctggtaaaactacttttagaactgaaaaattcactgattat
aaaggtgggagagctaaaactccttcagaattatcagagcaatttccagaaataaaaaat
ttactagaaggatatggaataaaaacttacgagctaaaaaattatgaggctgatgatatt
atcggaacattagctgcaaaagctgaaaagaaaaattatgatgttgtagttgttacagga
gatagggatctaacgcaattaacaactgacaaaataacagttgctgtaacagttaagggt
gttagtgaaattgaagaatatactccaagtcatgttgaagaaaaaataggtttaatccct
gaacaaatcgttgatatgaaagctttagtgggggatacttctgataattatcctggggtt
acaaaaattggtgagaagacagcaattaaattgttgaaacaatatggtactttagatgga
atctataaaaatatagatgaaatgaaaaagtctaagatgaaagaaaatttaatcagagaa
aaggaaattgcttatttatgccaagatttagcagaaattaggaaagacgctccagttgaa
atagatttagaagaaactgaatggactgggaaaaatattgagaaactagtaacgttatat
caaaaattagattttcgaaagtttttatcacaattaaaggctgaaagcagtgaacaatta
gatatttttgaatctaaaagtaatatagaatttactgaattaacagaagaaaatttgaat
gatataaagattagtgataatgacgaaatagtatttaatttagaaatagatggagaaaat
tatcatacagctgaaattattggtttctctattaaaataggtgataaatatttagtgtcg
gatgatatagatttactaaagaaaaaacaaatcaagaatttgttggaatctgatgaagtt
gaagtagatttatttgatggcaaaagacaatatgttggcttaaatagattaggtgttact
ttatcgaaaattaattttgatttgttacttgtatcatacttgctagataatagtgaaaat
agtaatgatctaggtttgttggcacaacagcacgaatattatgatgtagaatctgatgag
caaatatatggtaaaggtgctaaacatgctgtgccagaagataaagaagttttatttgaa
catttagtgagaaaagtaaaagcgataaataatttaaaagaaaaattatttaatgagtta
gaagaaaatcagcaactagatctatatacaaaaatagaacgtccattgtcgattatatta
gcaaatatggaaattgcgggcgtaaaagtggatagtaatagactagaaactatgcaaagt
gaattgaaagaacgattaagtgaactagagcaggaaatatataatgaagctggagaagaa
tttaacttaaattcaccaaaacaattaggtgttatattgtttgaaaaattaaagttacca
gttattaaaaagacaaaaacaggatattcaacagcagtaggtgtattagagcaacttaga
ggtatgtccccaattgttgataatattttacaatatcgtcaattagctaaaatacaatct
acatatattgagggattgttaaaagtagtttctaagaaagatgggaaggcccatacaaga
tatactcaaacattaacttcaacgggaagactatcttcagttgatccaaatttacaaaat
attcctgttcgtttagaagaaggtcgaaaaatacgtcaagcttttgttccaagtcatccg
ggatgggaaatattttcttctgattattcacagattgaattacgtgtattggcacatatt
tcaaaagacaaaaatatgcaagaggcttttaaggaaggcatggatattcacgcaagtaca
gcgatgagaatttttaatgtagatagtccggatgaagtaactcctaatatgagaagacaa
gctaaagctgttaattttggaattgtatatggtattagcgattacggtttatcacaaaat
ataggaatatcaagaaaacaggctaaacaatttatagatacctatttagatacattttca
ggcgtaaaagattatatggaaaaaattgttgaattcgctaaagaaaatggatacgtagaa
actatttttaacagaagaagatatctacctgatataaagagtcgtaattttaatttacgc
tcttttgctgaaagaacggctatgaattcaccaattcagggtagtgcagctgatattatt
aaggttgcgatgattaatatgcaagaaatgttaaaagaaaagaatttacaagcaaaaatg
ctacttcaagtacatgacgaattaatctttgaagcaccaacagaagaaattccattatta
gaggatatggttccaaaagttatggattcagcagttaagctagatgtaccgctaaaagtt
gaaagtaagcatggacaaacttggtttgatacgaagtag
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