Ligilactobacillus salivarius UCC118: LSL_0865
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Entry
LSL_0865 CDS
T00337
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl03030
DNA replication
lsl03430
Mismatch repair
lsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSL_0865 (dnaE)
03430 Mismatch repair
LSL_0865 (dnaE)
03440 Homologous recombination
LSL_0865 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsl03032
]
LSL_0865 (dnaE)
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_0865 (dnaE)
Enzymes [BR:
lsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSL_0865 (dnaE)
DNA replication proteins [BR:
lsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LSL_0865 (dnaE)
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LSL_0865 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
DUF1836
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
ABD99675
UniProt:
Q1WTT4
LinkDB
All DBs
Position
885267..888560
Genome browser
AA seq
1097 aa
AA seq
DB search
MYAPLQVLSSYSLLQSPLRISEYVKLGKELGYSALVLTDINSMYGVLDFYHECVKAGIKP
IIGITLQSGDDEYIFIAKNSNGYQNLMNISSKRLTAVDENYKNIFKLTDITEYLQDVIVI
LNPSYLTVNDIISDQVTELQTLVSAAETIYYGVNPNDRDAINNDLMAAEKLQLETILLTP
VKYLKERDYFSTKVLQAIGTGENVNPNWNFKNDGNYLHTPEEYGRLGTDYLSNAYQNAIN
VIAQCNLTLNFPKTQLPHFKETNGLSSEAFLRKLCQEGLAKRIAEENIKNQEEYQNRLDY
ELSVIHRMGFDDYFLIVWDVTNFAHENNILTGPGRGSAAGSLVSYTLYITDIDPIKYDLI
FERFLNEERAQMPDIDLDIPDIKRDTIIEYLHQKYGQQHMAQIITFGTLKTKQVLRDVAR
VFDLKTYEADAWSKAIPKEYGITLKEAYASSQSLKNLVADNSKNRLLFETAIALEGLPRH
YSTHAAGIILSDDDLVDHVPVQIGGDGILMSQFAKNQVEEVGLLKMDFLGLRNLSILENT
ITLIKKGYHIDFDIRKINLDDPETLKIYQNAETSGIFQFESAGIRGVLTKLKPTSFEDVA
AVNALYRPGPIQNIDEFIARKHGERPITYPSKELEGILKQTYGIMVYQEQVMQVASTMGG
FTLGQADSLRRAMSKKKHDIISRMEVMFINGAMKKGYTHEVAKKVYAYIMEFGDYGFNRS
HAVAYSKMSFELAYIKAHYPAAFFAALLNSVIGNPRKTKDYVLEAKNKGVKVHHPDINIS
QSLYILRNGGIYFGLSCIKSLRKNFLQDILQERKRSGIFKNMEDFLQRIDKRYLKRELIE
ILIYSGVFDTFGQSRKELLAMLPRLLSNIELSGNNVELFSILAPKKTTVEKIEISNDELL
EKENYYLGAYLSGHPVEKYAELIYLTNSTRVSQINESNKDKYVSMILQIKVIKIIRTKNG
SQMAFVTAADQTGNMDLTFFPNAYKRFSSVLEDGNIVLIEGRVDITRGLAITISKAMLAN
DVRIKTYYLRLSKAFDTSKRRNLEKLMLQNSGNVPVIIVDEKSGKKKLLNKKLWLSQDKI
VYNRLVELLGVENVVLK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctcccttacaagttttaagttcatatagtttgttgcaaagtccattgagaatt
tcagagtatgtaaagttaggaaaagaattgggatacagtgctctggtattgacagatata
aattcaatgtatggcgttttggacttctatcatgaatgtgttaaagcaggaattaagcca
attattggtattacattacaatctggcgatgatgagtatatttttattgctaagaacagt
aatggttatcaaaatttgatgaatatttcttcaaagagactaactgcagtagatgagaac
tataaaaatatttttaaattaacagatattacagagtatttacaggatgtaattgttata
ttgaatccatcgtatctaacggtaaatgacataataagtgatcaagtgacagaattacaa
acattagtgtcagctgccgagacaatttattatggtgttaaccccaatgatagagatgct
ataaataatgatttaatggctgctgagaagttacaattagagacgattttattaacacca
gttaaatacttaaaagaacgtgattattttagtactaaggtattacaagccataggaact
ggtgaaaatgttaatccgaattggaattttaaaaatgatggaaattatctacatacacct
gaggaatatgggcgcttaggtacagattatttaagtaatgcatatcaaaatgcaattaat
gtgattgctcaatgtaacttaacattaaactttcctaaaacacagttaccccattttaaa
gaaactaatggcctgagctcagaagccttcttgcggaaattgtgccaagaaggattagct
aaaagaatagcagaagaaaatataaagaaccaagaagaatatcaaaatagattagattat
gaattatcagttattcatcgcatgggatttgatgattacttcttaattgtttgggacgtg
acaaattttgctcatgaaaataatattttaaccggtccaggtagaggatcagcagctggt
tctttagtttcgtataccttatatattactgatattgatcctattaagtatgatttgatt
tttgagcgttttttgaatgaagaacgtgctcaaatgccagatattgacttagatattcct
gatataaaaagagatactatcattgaatacttacatcagaaatatgggcagcaacatatg
gcacagatcataacctttggaacattaaaaacaaaacaggtattgcgcgatgttgctagg
gtatttgatttaaaaacttatgaagcagatgcgtggagtaaggcgatacctaaagaatat
ggaattactctaaaagaagcgtatgctagtagccaatctttgaagaacttagttgcagat
aactctaaaaatcgactattgttcgaaacagccattgcacttgaaggattaccacgacat
tattctacacatgcggctggaattatcttaagtgatgatgatttagtagatcacgtacca
gttcagattggtggcgatggtattttaatgagtcaatttgctaaaaatcaagttgaagaa
gttggattattaaaaatggattttctaggattgagaaatttatcaattttggaaaataca
attacactaataaaaaagggttatcatattgattttgatataagaaaaattaatttggat
gatcctgagactttaaagatctatcaaaatgcagaaacaagtggtatttttcaatttgaa
tcagctggtatcagaggagtattaacgaaattaaagcccacttcatttgaagatgtagca
gcggtaaatgccttatatcgtccaggacctattcaaaatattgatgaattcattgcgaga
aagcatggtgaaagaccaataacttatccttcaaaagaactggaaggtattttgaagcaa
acttatggaattatggtttaccaagaacaagttatgcaagttgcctctactatgggagga
tttactttaggacaagctgattcgcttagaagagcgatgagtaaaaagaagcatgatatc
atctcgcgaatggaagttatgtttattaatggtgcgatgaaaaaaggatacacacatgag
gttgctaaaaaagtgtatgcttatatcatggaatttggagattatggttttaaccggtca
catgcagttgcttattcaaaaatgtcatttgaattagcatatataaaagcacattaccca
gcagctttctttgcagctttattaaattcagtaattggaaatccacgtaaaactaaagat
tatgttttagaagctaaaaataaaggagtaaaagtgcatcacccagacattaatattagc
caatctctatatatcttacgtaatgggggaatctactttggtttaagttgtattaagtca
ttgagaaagaactttcttcaagatattttgcaagaaagaaaacgaagtggtattttcaaa
aacatggaggatttcttgcaaagaatcgataaaagatacttaaaaagagaattaatagag
attttaatttattcaggtgtctttgatacatttggtcaatctagaaaagaattgttggcg
atgttaccacgcttactaagcaatattgaacttagtggaaataatgttgaactattttca
atattagcacccaagaaaacgactgtagaaaagatagaaatttcaaatgatgaactctta
gaaaaagaaaattattatctaggggcttatttatcaggtcatccagtcgaaaaatatgca
gagttaatctatttaaccaattcaactagagtttctcaaataaatgaatctaataaagat
aagtatgtttcaatgattttgcagataaaagttataaaaatcattagaactaaaaatggt
tctcaaatggcgtttgtaactgcagcagatcaaactggaaatatggatttaacgtttttc
cctaatgcatataagagattttcatcagttttggaagatggaaatattgtcttaattgaa
ggtagagttgatataacaagaggattggccataacaattagtaaagcgatgttagcaaac
gatgtaagaataaaaacttattatctacgtttatcaaaagccttcgatacaagtaaaaga
agaaatcttgaaaagttaatgctccaaaatagtggtaatgtacctgttattatagttgat
gaaaaatcagggaaaaagaaacttcttaataaaaaattatggctatcacaggataaaata
gtttacaatagacttgtagagttgttaggagttgaaaatgtagttttgaaataa
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