Lepeophtheirus salmonis (salmon louse): 121115894
Help
Entry
121115894 CDS
T08214
Name
(RefSeq) lysine-specific histone demethylase 1A-like
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121115894
Enzymes [BR:
lsm01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
121115894
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
121115894
REST complex
121115894
Histone demethylases
121115894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
Pyr_redox
AlaDh_PNT_C
FAD_oxidored
Pyr_redox_3
FAD_binding_2
HI0933_like
FAD_binding_3
Thi4
2-Hacid_dh_C
Lycopene_cycl
MRPL52
GIDA
IlvN
DUF3843
MurD-like_N
TrkA_N
Motif
Other DBs
NCBI-GeneID:
121115894
NCBI-ProteinID:
XP_040566003
LinkDB
All DBs
Position
4:complement(38590037..38593280)
Genome browser
AA seq
787 aa
AA seq
DB search
METAEGTSSSSGTKDPSEVIELDEEEELSGGQKRRGSNNGEGGPKKAKMDSSSSDVEEDE
DAEEDPEAEEDTSKKEEEEEEEVEEEDLMGLPVEPNGLEGAAFQSRVPFDKMTQVEAACF
PGLLHNLAAQKVFIKIRNRYLQMWLENPKEYLSMSLDRIEPPWNSDVQLVKRVHAFLERH
GYINFGIFKREVRPKTADAPKGKVVIIGAGIAGLAAAQQLKAFGMEVVVLEARDRVGGRI
ATFRKGPYVADLGAMVVTGLGGNPITVLSKQVNMELSKISQKCPLYESNGNTVPKDKDEM
VEREFNRLLEATSYLSHQLDFNYCNGKPVSLGQSMEWVIKLQEKHVKERQIKHFKEVISV
QERLKENQSRLITLKDKIVETGKQREELEKITNRDVGQEFDYRAKVRDLVAFLKEYDSLM
DEEKELSQKTQEMDASPPSDVYLSSRDRQIIDWHFANLEFANATPLNNLSLKHWDQDDGF
AFTGSHLIVRNGYSCVPVALSEGLDVKLNTAVRQIRYGQNGVEISASNARNHTNPVVFKA
DAVLCTLPLGVLKQAIAQNSQGLPNTVSFSPPLPEWKVESIKRLGYGNLNKVVLCFDRAF
WDSDSNLFGHVGSTTASRGELFLFWNLYKAPVLLALVAGEAAAIMENVSDDVIVGRCIAV
LKGIFGNTNVPIPKETVVTRWRADPWSRGSYSFVSTGSSGNDYDILATPVIPGNPGKSND
MIKNPPRVFFGGEHTIRNYPATVHGALLSGLREAGRIADQYLGCPYAPPSGVTGDVFGKS
DAAFSSS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagcggaaggaacatcgtccagctctgggaccaaagacccttctgaagtgatt
gaattagacgaggaagaagaactgagtggaggacagaagaggcgtggctcaaataacgga
gagggaggtcccaaaaaagcaaaaatggattcatcctcctcggatgttgaagaagatgaa
gatgcggaggaggatccagaagcagaagaagatacttctaaaaaggaagaagaagaagag
gaggaggtagaggaagaggatttgatgggccttccagtggagcccaatggtttagaaggt
gctgcctttcagtctcgagttccttttgataaaatgacgcaggtggaggctgcttgcttc
ccgggactcctccacaatctcgctgcacaaaaggtatttatcaagataaggaatcgatat
cttcaaatgtggttggaaaacccaaaggaatatttgagcatgagccttgataggattgag
cctccttggaattcagatgtgcagctcgtgaaaagagtacatgccttcttagaaagacat
ggatatattaacttcggaatcttcaagcgagaagttagacctaaaacggcggatgcccca
aaaggaaaggtagtcatcattggtgcaggtattgcaggccttgctgcagctcagcagctc
aaggcatttggtatggaggttgttgttttggaagcacgtgatcgtgttggaggacgtata
gcaacatttcgaaagggcccatatgttgccgacttaggagctatggttgtcacgggtttg
ggtggaaatcctatcacagtcttgtccaagcaagtcaatatggaactgagtaagatttca
caaaaatgtcctctctatgagtccaatggtaacactgtgccaaaagataaggatgaaatg
gttgagagagagtttaatcgtcttcttgaagctacttcctatttatctcatcagttggac
ttcaattattgtaatgggaagcctgtgtccctgggtcaatccatggaatgggttattaaa
ctccaggaaaaacatgtgaaagaaagacaaattaaacactttaaagaagtcatttctgtt
caagagaggctaaaagaaaatcaatctcgacttattactctcaaagataaaattgttgag
actggtaaacagagagaagaattggaaaagattacaaatcgtgatgtgggacaggaattt
gattatagagctaaggtgcgtgatctggtagcatttttaaaggaatatgatagcttaatg
gacgaagaaaaggaattatctcaaaaaacacaggagatggacgcatctcctcccagtgat
gtatacttatcttctcgagatcgacaaattatagactggcactttgcgaatttagagttt
gccaatgctacacctctcaataatcttagtcttaaacattgggatcaggatgatggtttt
gcgttcacaggaagtcatttgatcgtaaggaatggctattcatgcgttccagttgcatta
agtgagggtcttgacgtcaaactcaatactgctgttagacagattcgttatggtcaaaat
ggcgtagaaatatcagcgtcaaacgcaagaaatcacaccaatcctgttgtatttaaagca
gatgctgtgctctgcactttacccttaggagttcttaaacaagcaattgcccaaaattct
cagggtcttccgaatactgtctcatttagtcctccattaccagagtggaaggtggaatct
atcaaacgattaggatacggaaatttaaataaagtagtcttatgctttgaccgcgcattt
tgggattcagattctaatctttttgggcatgttggaagtacaactgcgagtagaggagag
ctttttttgttttggaatttgtataaagctcctgtccttttggcattagtagctggagag
gcagcagctatcatggaaaatgttagtgacgacgtcattgtcggcagatgtattgcagtt
ttaaaaggtatttttgggaatacaaacgttcctattcctaaagaaactgttgtcactcga
tggagagcagatccttggtctagaggatcatattcatttgtctctacaggttcctctgga
aatgattatgatatacttgcgactcccgtaatcccaggtaatcctggtaaaagtaatgat
atgatcaagaatccacctcgtgtattttttggtggtgagcacacaattcgcaactatcct
gctactgttcatggagctctcctttccggattaagagaagctggtcgaatagccgatcaa
tatttggggtgtccatatgctcccccatctggagttacaggagatgtgtttggaaagtca
gatgccgctttcagttcttcataa
DBGET
integrated database retrieval system
