Lepeophtheirus salmonis (salmon louse): 121116195
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Entry
121116195 CDS
T08214
Name
(RefSeq) mucin-5AC-like
KO
K18721
nucleoporin NUP1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121116195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121116195
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121116195
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121116195
NCBI-ProteinID:
XP_040566372
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Position
4:53021483..53025866
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AA seq
1260 aa
AA seq
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MSFLSSWIPRDLKNKWSSLSIGGSSPGSPSLVGGVSVGMSPSLGSTPNRPSQQENRVPNQ
MVRSLPRRGIGNLPRVRLGGVKRTPLRRSSNATVKIAPFSPFRGGMSVRGSAASPSSGAS
SVSRPTRVVSVLRELSSSRKRQSVQKEVEEDEEEEEYDEESSAPPPHMKRPRRDSCSSLG
SSLSMEMPPLFSNGVVPQSTTSQLVSLEADLSLNTLLSSQQQQQQQEHHHRHHHKKRPIM
TNNEILSSLSSSLCLKRKAYPSSESESESSSEEDDDKRSSTTGNIYASPDRLKKIKKRRK
TRHSSSSSASNEIILPKVHDLVPQNNPLEKEGPQHKISNVQDLQEDKRKEKKRVEELLSA
FSEEIEEEENIKTTSGGVLDNIVENKKEEGKSSVTTHQISSGGDKGGFHFDHTKKKEQEN
NTSTTVLNNEKAGFSFQFGDKKGGASVSETTPNPSDKATIAITTTTESKETKSSGFKFGI
PETTTASVSSSSSTPLQQPSSSSLSSTTTTTPSSSFSESITSASLAPTVNKPSASFSFGN
TATITSSSSQSKDANKMSSGFSFGAGAAKANNKSSESTNKPMGLAGFPAFDVKTTVTSSS
TSSTPSKTFSFGGVVATPTSSAAPSTITFGSVSNTSTSATPTPTSFSFGGPAVSKATTST
TSGFAFGGSPSVASSISSTNSTGTASTTPFSLGGKPSVAPTNTNNAPGGSNFAFGSTGVS
TATPKSSPAPLSTSTFAFGGQSNSSSTPSGLKTATTTSSFAFGAAAPPNATAPSSSPFSF
GSSASSSIAKTTNNSSTFAFGASSTNNQDQKGFAFGSGGPPAVTNATATTSASSLFAFGS
SASSTTAPSASSFNFGNPPPSTTSASAGFAFGGAGTTTATTTNPGSATNNVFSFGATPSN
APAPATSKSGFNFAAEKQQPESKSFSFGGTAATPGNNPAAPAATNVFNFGSSSTPASSSS
SSPSTFAFGNAPSGGSSFGGFGSTAPSAPVAKPTEPAGFGFGNAVAPTTKTDVPSSFSFS
STPAAVGVNPSNKNSSSAFTFGSTNPAPPLQAQQPSSNAGFNFSGSFPKQDENNKGHLSF
GAAASQQPPNNVSSAFSFGGSSSNNKVANVSSTNKGPSGAGTPFQFGASNSSNAGAPSSS
SGVFTFGSAPQSNSTNEFQTGAPPPSNTFGMNAPTNNTFGKPSTTNTGGFNFSGAGGTAP
PPVFGATNNAMPNNPGFQSPIQQQPPPQPGNSMFNIGAPASNNTNTKGRNIARARRTKKA
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcttatcatcctggataccacgagatttaaaaaacaaatggagttccctgagt
ataggagggagttctcctggatctccgagcctggttggaggagtgagtgtggggatgtct
ccgagcctgggatccacgccaaacaggccctctcagcaagaaaaccgcgttccgaatcaa
atggtccgctccttaccccgaagagggatcgggaacttaccgcgcgtgcggctgggagga
gtgaagcgaacgcctcttcgcagatcctcgaacgcgacagtgaagatcgctccgttcagc
ccctttcgcggcggaatgagtgtgcgagggagtgctgcgagccctagtagtggagccagc
agcgtgtctcgccctacccgcgtcgtgtctgtcttacgagaactctcttcttcccggaag
cggcagagtgtgcaaaaggaggtagaagaggatgaggaagaggaagaatacgacgaagag
tcgagcgcaccgcccccacacatgaaaaggcctcgcagagactcatgcagttctttaggc
tccagcttaagcatggaaatgccgccccttttctctaatggagttgtgcctcaaagtacg
acctcccaactcgtgtctcttgaagcggatctgtctctgaatacccttctctcctcacag
cagcagcagcagcaacaggagcatcatcatcgtcaccatcataaaaaaagacccatcatg
acaaacaatgagatcctgagctccctctcctcaagtctttgtctgaaacgaaaagcatat
ccatcttcagagtcggagtcagaatcaagtagtgaggaagatgacgacaagagatcctca
accactggcaatatctatgcctcaccagatcgccttaaaaaaattaaaaagcgaaggaaa
acacgtcattcttcttcctcatccgcttcgaatgagattattctacccaaagtccatgac
cttgtaccacaaaataaccctttggaaaaggagggtcctcaacataaaatatccaatgtg
caggatcttcaagaggataaaagaaaggagaaaaagcgggttgaggaactattgagtgca
ttttcagaggaaattgaagaggaagaaaacattaaaacaacatctggaggtgtactagat
aatatagttgagaataaaaaagaagaaggcaaaagcagtgttactactcatcaaattagt
agtggaggggacaaaggtggatttcattttgaccacacaaagaaaaaagaacaagagaat
aatacttcaacaacggttctaaataatgaaaaagctggattttcattccaatttggagat
aagaaaggaggggcatccgtgtccgaaaccactccaaacccttctgataaggcgacaata
gcaataacaacaacaacagagtctaaggaaacaaaatcatctggattcaaatttggaatc
ccagaaacaactactgcatcagtgtcatcaagtagctcaactcctctccaacaaccctct
tcatcatctctatcatccaccacgacgaccactccatcttcgtcattttcggaatctata
acatcagcttcacttgctcccactgttaataagccttctgcatcttttagctttggaaat
acggctactataacatcttcttcgtctcaatcaaaagacgcaaataaaatgtccagtgga
ttttcatttggagctggagccgccaaggccaacaacaagtcttcagaaagtactaataaa
ccaatgggactcgcagggtttcctgcatttgatgtcaaaacgacggttacttcctcgtct
acttcatccacaccttctaagacattttcttttggtggagtcgtagctactcccacttcg
tcagctgccccatctaccatcacatttggcagtgtttccaatacatccacttctgcaaca
ccaactccgacttcattttcttttggaggaccagcagtatctaaggcaacaacatccact
acttccggttttgcatttggtggctcgccttctgttgcttcatcaatatcctccactaat
agtacaggcacagcttccaccacacccttttcccttggaggaaaaccttctgttgctcct
actaatacaaataatgctcctggaggatccaactttgcatttggcagtactggggtatcc
actgcaactcccaagtcttctcctgcacctttgtcaacttcaacttttgcctttggtggt
cagagcaatagcagcagcactccttctggccttaaaacggcaactacaacttccagtttt
gcttttggggctgcagctcctccgaatgccactgctccttcatcatcacccttttctttt
ggatcgtctgcaagttcttctatagcaaaaacaacaaataattcttctactttcgcattt
ggagcttcatctacgaataatcaagatcaaaaaggatttgcgtttggttccggaggacct
ccggcagtaacaaacgcgactgctacaacatctgcaagttctttattcgcattcggctca
agtgccagtagtactacagctccttcagcgtcttcatttaactttggaaatcctccccct
tcaacaacttctgcatcggcaggatttgcatttggaggagccggcactacaacggcgaca
acaacaaaccctggatcagcgacgaataatgttttttcatttggagctaccccttcaaat
gctcctgctcctgcaacttctaaaagtggtttcaactttgctgctgaaaagcaacaacca
gaaagtaaaagctttagttttggagggacagcagcaacccctgggaataatcctgctgcg
ccggcagcaacaaatgttttcaactttggatcgtcttccactcccgcatcttcttcttcg
tcgtcgccatccacatttgcctttggaaatgccccatcgggaggatcttcctttggtggg
tttggatcaactgcaccgtctgctccagttgcaaaaccaacagagcctgcaggatttggt
tttggcaatgctgtggcccctacaacaaaaactgatgtaccatcatcattttcttttagt
tcaactcctgctgctgtgggagttaatccctctaacaaaaattcatcttctgctttcacc
tttggatctacaaatccagcacctccactacaagcacaacaaccatcttcgaatgctgga
tttaacttttctggtagttttcctaaacaagatgaaaataataaaggtcatctctcattc
ggtgcagcagcctcccaacaacccccaaacaatgtatcttccgcattcagttttggaggt
agtagcagcaataacaaagttgctaatgtcagtagtactaataaaggaccaagtggtgct
ggtactccctttcaatttggagctagtaatagttctaatgctggagcaccgtcatcatct
tcaggagtcttcacatttggttcagcaccacaatcaaatagtacgaatgaatttcagact
ggagccccacctccttctaatacgtttggaatgaacgctcccactaataatacattcgga
aaaccgtctactactaatactggaggcttcaacttttctggagcagggggcacagctcct
cctccagtctttggagctaccaacaacgctatgccaaataatccaggattccaatcgccc
attcagcaacaacctcctccacaacctggcaactcaatgtttaatattggagctccagct
tccaataatacaaatacaaagggtagaaatattgcaagagccagaagaacgaagaaagca
taa
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