Lepeophtheirus salmonis (salmon louse): 121116880
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Entry
121116880 CDS
T08214
Name
(RefSeq) serine-rich adhesin for platelets-like isoform X1
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121116880
NCBI-ProteinID:
XP_040567114
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All DBs
Position
4:complement(19281481..19398590)
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AA seq
1835 aa
AA seq
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MLQSLPINNPSISSSKNRMTTLAASSGVTVLVNSNENHFPPHHLHHHRSIMDESTSDYYS
IGGSSSRSSDELSLSETPTNSHYGTLKRGSNRRESSNGGFVTVLKIGGESSSNTRHIPVP
KDRKPFRSMSSNRIVGSQTSSSNGVCVQIKHRSASHSTLNHHNLSSSGASTRTKNTQTLL
SQKNIGVHGKSYSVDNYIHRVDFSASSRSTVHSTTSNNNNHNSNKKNNNYEKQQPCTKKN
PSSLIQNQRQITSSSTQGVPPSSSIVKGYLKRSASASCDIGRSNKPRRHHHPFNSRYNSE
LSIKNPLLINSPTVSQHSSPRSPPIVEENLTIYRLPGEKLGLGLRFEGGSRPEENVKRLF
IQCAANNSPAKRAKCTWGSLEEGDEILTINSKYIKRMTRSDCVKALKESPVSVKMRIRHY
FNQLLYSGSYNIERQDTGISPSCKSRSLQNQNYNSDKCNTLPSKLPSKPKRTLPDPSALF
RPSSLSSKTNTNTKKPPRTKVLGNAQISSRSASVPALGPPKGFGDTDKHSSISSRHSVQT
LSLSKRKETAATVIEDELDEIETMVDDEEDEISRNIQTLPKSYRWKEESKDTRRELKILP
VLTVQDTLSNQEMPSLPPQAEIYINLLEKEDEYEHLRRYDESDTTGTPSTINSSTKSSFS
AADYKSRMNHHQFDLAKVLHPFEKLERELTGQVHENIRPPSAFDEKQEDQNRSKIGSKNH
ISQSINEGIKENIENNSIHHTILKSESSNLITSKSTKTQGVDISKEESGGGRPERDNSSS
ILQGGMEDCLVSCHHNHSFSQDSSDSGSIGPPPSDSRLPPDGHEFPPDYKDPTSTNISGT
KDDLINCKSSNCSSEQFRALKLINTNRLITRHDEKSIKSVKAKIAMFQSSPPSQASNPSN
KKEDPSSFRFDSKTRSMTNVSSNLKRSPVSSEEESKNKIQNRSQSLLEIPLSSSSTHSSQ
SNNTLVKRFNSSGYIPIDSLETRRRSNISKLKGLVIPESGSEVSHETKSASSIELPEIIS
KDLSEAKRINLETPKSITTASSSTTSTTTSIMTSTSSNITTTMSTIKPTQRSITAPPWKQ
SSPTSHHSQYSPAFKRKPFSLFDDSPTLSDPPKARSTPLKDEYSSSSSTLFEEEMDENNP
RLLKRESVEAINRKNILDSCKKSSGVTALSRKNIGKPASRSSSFTIAERKKSFENGSKPE
NRRFSREIDVSRRSSSSVTPTSSRRSSKSSDITLEGNPRLSFDDSNEDEVDNGNSDNILD
NCSHSSWKSDENKSVDNQEKCVNLEEEMKDIDIDENWGESKDDLNNDSNISMDIIDDSLF
KLGEEACTNVNVLYTSSKKDNVLYSGSSKLIPSNCINNLNPSLPPPPQNSHMLSKPFHPP
DRKYSVPIYSNNDHVKMREKKNDPVPSRPSSLVDTAEMKVFEVGNLGPNTNPSHVSSPIH
NETIADCVSKSSNNSTSSGRRAVSVNDIRRAFEKAEASLSLTANTSSNSSGGAPSHNRMS
SIDSTTSEESSIPTPHYYGSVSSLISGQSNLKDHYGSITSLASSTSLISPQELQGLIDEA
NQSLEESGTPSHEIMVIVLHREFTAGSIGITLAGGVDYENKDITVHKVIPGTLADRDGRI
QKGDRVLSINGRSTKGVTHREALSILKGPRAEVVLVLSRSRSVTPAEYDRTDFSSYGSNG
RPPKILESPLDHKSLLSDLKFVDVPRSPPVTVVLKKEGTGLGFSLEGGKDSPVGDRPLTI
KKIFTGGAADKSSILKIGDEILSVNNTDCTRMSRIEAWNFMKKLSDGMASIVVRQKLDNT
EHSPPTPDVTEKSNPNILPGSHTSEESHSKLEANR
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaatctttgcctatcaacaatccgtcaatttcatcgtcaaaaaacagaatgaca
acattggcagcatcctctggtgttactgtactagtgaatagtaacgaaaaccattttcct
cctcatcatctccaccaccatagatccatcatggatgagtccacttcggactattactca
ataggtggttcatcaagccgatcctcagatgagctttctctctcagaaacgcccacaaac
agtcattatggtacactcaaaagaggttcaaatagacgggaatcctcaaatggaggtttt
gtaacagtccttaaaattggaggagagtcaagctcgaatacacgtcatatcccagtaccc
aaagatcggaagccttttcgttctatgagtagtaatagaatagtggggtctcaaacatca
agttcaaatggagtttgtgttcaaatcaaacatcgctcagcatctcattcaactctaaat
catcacaatttatccagtagtggggcaagcacaagaacgaaaaacactcaaacgcttcta
tcacaaaagaacattggggtacatggaaaatcttattctgtcgacaattacattcacaga
gtggatttttccgcatcctcgcgctctacggtacactctaccacctccaacaacaacaac
cataacagcaataaaaagaataataattacgagaaacaacagccatgcacgaagaaaaat
ccaagcagtttaattcaaaatcagaggcaaatcacttcatcatctactcaaggagttcct
ccttcatcctccatagttaaaggctatcttaaacgaagtgctagtgcctcgtgtgacatt
ggacggtccaacaaacctcggagacatcatcatcccttcaactcacgatacaactccgag
ctctctattaaaaatcctctattgataaactctccaacggtatctcaacactcaagccct
agatctccacccattgtagaggaaaatctgacaatttatcgactaccgggagagaagtta
ggcttgggtcttcggtttgaaggaggatcaaggcctgaggaaaatgttaagcgattattc
attcagtgtgctgcaaataacagtcctgccaaaagagccaaatgcacttggggctcatta
gaagaaggggatgagatcctcactatcaatagtaaatatattaagcgaatgactcgctct
gactgtgttaaagcactaaaagaatctccagtttccgtcaaaatgcggattcgtcattac
tttaatcaattactctatagtggatcatataatattgagagacaagacacgggaatatct
ccttcttgtaaatcgcgatctcttcaaaatcaaaattataattctgacaaatgcaatacc
ttaccatcaaaattaccctccaagcccaagagaactcttcctgatccatctgcactcttt
cggccatcgtcattatcatccaagaccaataccaacacaaagaaaccaccgagaaccaag
gtattaggaaatgcacaaatttcatcccgatcagcctccgttcccgcccttggacctccc
aagggtttcggagacacggataagcattcctccatttcatcgcgtcatagcgttcaaact
ctaagtctttccaagaggaaagaaactgctgcaacagttattgaggatgaattggacgaa
attgagaccatggtggatgacgaagaagatgaaattagtcgaaatattcaaacccttccc
aaatcctatcgatggaaagaggagagcaaagacacaagaagagagctcaagatccttcca
gttttgacagtacaagacactttatcgaatcaagagatgcccagtctacctccccaggct
gaaatatacatcaaccttctcgaaaaagaggacgaatatgaacatttgagacgctacgac
gagtctgatacaactggaacaccctccactatcaacagtagcactaaatcctcattttca
gcagctgattataaatcccgtatgaatcatcatcagtttgatttagcaaaagtgttacat
ccctttgagaaattggaacgagagttaacaggacaagtccatgaaaatatacgaccccct
tcagcatttgatgaaaagcaagaggatcaaaatagaagtaaaatcggttcaaagaatcat
attagtcaaagtattaatgaagggatcaaggaaaacattgagaacaatagtattcatcat
acaatactaaaatcggaatcctcaaatttaatcacgtcaaagtctacgaagactcaaggt
gtggatatctcgaaagaagagagtggcggtggcagacccgaaagggacaattcatcctct
attcttcaaggtggaatggaggattgtttagtctcttgtcatcataatcattctttctca
caagattctagtgattctggatcaatagggccaccaccctcagattcccgattacctcct
gacggccacgaatttcctccagactataaagatcctacttctacgaacatttctggaact
aaagatgatttgataaattgcaaatcctcaaactgcagttccgaacaatttcgtgcactc
aaacttattaatacaaatcggttaatcacaaggcatgacgagaaaagtattaaaagcgta
aaagcaaaaatagctatgtttcaatcaagtcctccttctcaagcatctaatccctctaat
aaaaaggaggatccatctagttttcgttttgattcaaaaactcgctccatgactaatgta
tcttcaaatttaaagcggtctcccgtgagttctgaggaagaaagtaaaaataaaatccag
aatcgttctcaaagtcttctcgaaatccctctttcatcatcttctacgcattcaagtcaa
agtaataatacattagtgaagagatttaattcatcaggttatattcccattgattcctta
gaaaccagaagaagatccaacatcagtaaattaaaagggttagtaattcctgaaagcgga
tctgaagtttcacatgaaacaaaaagtgcttcctccattgaattgccggagataatttca
aaagacttatccgaagctaaaagaattaatttagaaactcctaaatcaattactactgcc
tcttcctctaccacctccactacaacttccattatgacatctacatccagtaatattaca
accacaatgtccacaattaaaccaacgcaacgttcaatcactgctcctccttggaagcaa
tcttctcctacgtctcatcattcccaatattctcctgcatttaaaagaaaaccattttct
ttatttgatgactctcccactctctcagatcctcctaaagctcgttctacacctcttaaa
gatgagtattcttcttcatcttctactctctttgaagaagaaatggatgaaaataatcct
cggttgcttaagagagagtcggtcgaggccatcaatagaaaaaatatactagattcttgc
aaaaagtcaagtggcgttacagccttatcgagaaaaaacattggaaaacctgcatcaaga
tcttcctccttcaccattgcagaaagaaaaaagagctttgaaaatggatccaagccagag
aaccgtcgcttttctcgcgagattgatgtctctcggcgatcttcttcctcggtcactcct
acgtcgagtcgtagatcatcaaaatcatctgatattactcttgaaggtaatcctagactt
tcctttgacgattcaaacgaagatgaagtagataatggaaatagcgataatatcctggac
aactgttcgcattcttcttggaagagtgatgaaaacaaatcagtcgataatcaagaaaaa
tgcgtgaatcttgaagaagagatgaaggatattgatattgacgaaaactggggagagtcc
aaagatgacctcaataatgattccaatatttctatggacattattgatgatagtctattt
aaattaggagaagaagcttgcacaaatgttaatgtattgtatacttcttctaaaaaggat
aatgttttgtatagtggttcttctaaattgattccctctaattgtatcaacaatttaaat
ccctcattaccgccacccccacaaaatagtcatatgctctctaagccctttcatcctcca
gatcgaaaatattctgtaccaatttactctaataatgatcacgtaaagatgagggaaaaa
aagaatgatcctgttccttctaggccttcatccctggtggatactgcggaaatgaaagtg
tttgaagttgggaatttaggtcccaatacaaacccttcccacgtttcctctcctattcat
aatgaaaccattgcagactgtgttagtaaatcaagcaataattcaactagcagcggtcga
agagcagtgagtgtcaacgacattaggagggcctttgaaaaagctgaagcttctctttct
ttaaccgcaaatacttccagtaactcctcaggtggagcaccaagtcataatcgaatgagt
tcaattgattccacaacttctgaggaatcttcaatacctactcctcattactatggttct
gtttcaagtcttatatccggacagtcaaacttgaaagatcattatggttccatcacttct
ctagcatcttccactagcctaatttctccccaggaacttcaaggcttaatagatgaggct
aaccaatcgctggaagagtctggaactcctagtcacgaaattatggttattgttcttcat
cgagaattcacagcgggatctattggcattactctagccggaggtgtagattatgaaaat
aaagatatcacggttcacaaagtcattcccggaacactagctgacagagatggcagaatt
caaaaaggtgatcgggttttgtcaatcaatgggagatctaccaaaggtgttactcacaga
gaggccttgagcatattaaagggtccaagggcggaagtagttttggttctttcaaggagt
agatcagtcactcctgctgaatatgaccgtactgatttttcaagttatggaagtaatgga
agacctcctaaaattttggaaagtcctctggatcacaaatctttgttgtcagatttgaaa
ttcgtggatgttccacgttctcctcccgttacagttgtgctaaaaaaagaaggcacagga
ttaggctttagtcttgaagggggaaaagactccccagtaggagacaggcctcttactatt
aagaagatatttactggaggagcagcagataaatcttcaattctgaaaattggagatgaa
attctgtctgtcaacaatacagattgtacaagaatgtctagaattgaggcctggaatttt
atgaaaaaattgtctgacgggatggcttctattgtagttcgccaaaaacttgataatacc
gagcactctcctcccactcctgatgtaaccgaaaaaagcaatccgaatatacttcctggt
tcccacacctcagaagaaagtcattcaaaattagaagcaaatagataa
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integrated database retrieval system
