Lepeophtheirus salmonis (salmon louse): 121122343
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Entry
121122343 CDS
T08214
Name
(RefSeq) uncharacterized protein LOC121122343 isoform X1
KO
K20647
Rho GTPase-activating protein 32
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121122343
Membrane trafficking [BR:
lsm04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121122343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
121122343
NCBI-ProteinID:
XP_040573239
LinkDB
All DBs
Position
8:25391760..25489773
Genome browser
AA seq
1862 aa
AA seq
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MSEISEDIFTRRIILTEAEVSPFVVRRPTTTFIRRRKRAFDAASSNALIRRSYSSREVSR
KDDEAIGLGKDERRESGLRSAEDLLQDDEDDVNCPSSVTMESTIPSGKTRASSSSLFKTF
GLKRTLTMNSIIQNLNKSFRFRRRTQSCRQDKTTNLRNSTTRMSSSELTTSTPLTGSSLR
KYSDSSRSRVIGLSNIDPKFTSQSGLCTSTDLETSRGSIRIQHLTALNNETAGSSRCPRI
ENCAHFHYEFTEICGIQIELISEEEELRSLLPLDVNETGGSFLDHPTRVFSIQVSSLGKT
WNIKRSIEDFYFLDRQAHQCIWDRKLSRLPLIPRGEENFKLPSNYTSYKDSVRRFFSDYI
KRFSTLAGPVITCGPVLNWFDLDNRGHRLLVSEDCAINTPAVAAAYAVTRYAKQASDEIS
FEVGDMISVIDMPPPDESIWWRGKKGFEVGFFPCECVEVIRDKVPSGLNLPGSTPSDHNN
TFKMISSSSNSSSGSEGEEEEDVVDGISPSSASSEPTKPVLRKHGKLISFFRSFILSRPT
RGKLKKSGILRERVFGCDLSEHLLNTSQEIPKVLFHCAEFIESKGIIDGIYRLSGIASNI
QKLRVTFDEDRVPDLYNDRSVLQDIHCVSSLLKMYFRELPNPICTYHLYEKFVEAAKSSE
NQRLILLRDVVQQLPPPNYRTLEYLSRHLYRVSLRGNETGMTAKNVAIVWAPNLLRSKSL
EVGGVAALQGVGIQAVVTEYLIRYCELIFSEKMPTYTGSACTSSSNNSNSSSSGSQQSQE
TPKKSRPKSLAISTPTKLLSLEEARSRALTAASGSYVPQEQRYIEVGGGPSNLPPTYHTV
IDLPNNSIRKHYSERASSRHRKSPVGWKTIFTSGKIKYKSNNKISDSEHLTNNDESEFST
TTTDEDHQKVTATASLDTSSCAMNFNATLRPVKSAESLIPQSERSFKDLSSSSSSPNSGE
VKDEVASLETVTRAILKTTASRDSPKTHSRSSSHDSYFERTPLSSLSFKSSKPISSDSES
PVDPKSSSLDLSEIQVNFELEENEMKIFSEDEDALMSTSFTSIDDDDDEARPSFRRISRH
NSRKSDQLRIPIFKGPKEQGAPSSPVLNNNNNNNSVLNSEVSPKKKKSDFTPGTSPNANL
VKRSKMETETEEIMNPSLAMSPSIKFIDDRPASAIEVDQESLSDCLEHTSNEEKEEIIQC
ETVAIFDEKSEKSEIKNSIEMDRLSFVFSNENDFVCNVSLNEDNLDKLVIAEIHNDPQTK
NNASVAGDNEETDQEEPSISTVKELSLEVFSPDETDNTKDESSDNPIKDDQIIVESNLED
DGHSIIENSIENSSISSPIETSYSIAGATVSENESFSLTSFEDDFKPNGEEEVEQGERQD
KEDTIPKLYSTSPTQVTEFKKEDPLSPPKFTSEEIIIRPFTHESVVAMEIDEDSNITFIK
DPSSSTDQQHPSVLMEIEENSIKELMTAVPVHVLEDGCDEEDDEEEEEEQLGHFDYQPIQ
TSSCSSDSYSLLLEDIKSSGGLSTSYKKKGTQQYYTRSNSVEENNGRMSSQGIPELEAKL
NESNLFKASRAVCKSEDFPKKLSKRNTETQILSPGDGGDEVPLVRRNSIHNVPYVDVNDP
GTRERMERYKEERRSLFRAKYKVEDYRVGSSSGGNSSGHKANTNMVSNPSSPIKIPSPSS
PSLFDITTTSESTIKDKKPPLERISTQIQNHFYSCSATTATTTNVLEHNYKNSNHTKVND
NNNLLLNNEYNTKLTKPTLSLPRKNNSPSSSSSFGLINEDVNVKERAAIFGKKSRSNEEN
ESKRKSLPISSSNSNLRLLNNNGSSSSNSVSRSRSSNSGHLDKSPVSPNKIKNIAALFEQ
KS
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagattagtgaggatatttttactcgaaggataattttaaccgaggccgaagtc
tcaccttttgtggtgagacgcccaaccaccacttttattcgtcgtcgaaagagggctttt
gatgcagcctcttcgaatgcgcttattcggaggagttatagttctcgtgaagtgagtcgg
aaggacgatgaggctattggtcttggaaaggatgagaggcgggagtcgggacttcgtagt
gctgaggatttacttcaggacgacgaggatgacgtcaactgcccatcatcggtcactatg
gaatccacgataccctcagggaagactcgtgcatcttcatcgagcttattcaaaaccttt
ggattaaaacgtactcttactatgaactctattattcagaatctgaataaatcattccgt
ttccgtcgacggacacagagttgtcgacaggataagacgacaaatcttaggaattcaact
acgaggatgtcctcgagtgaactaacaacctccactcctctcacaggatccagccttcga
aagtattcggatagcagtagatcccgtgtgattggactctccaatatagatccaaaattt
acatctcagagtggactatgtactagcacagacttggaaacgtcgcgtggctctattcgc
attcagcatttaacggctctcaataacgaaactgctggatcttctcgatgtcctagaata
gaaaactgtgcacattttcattacgagtttacggaaatatgtggaattcaaatcgagctt
ataagcgaagaagaagaacttcgatccctattgcccttggacgtcaacgaaacggggggt
tcattcttggatcatccaacccgagttttctctattcaagtctcctctctggggaagacc
tggaatattaaacgaagcatcgaggatttctattttcttgatagacaagcgcatcaatgc
atatgggacaggaagctttcacgtcttcctttaatacctcgaggagaagaaaattttaaa
ctcccttcaaattacacttcatataaggactctgtaagaaggtttttctcagattacata
aaacgattttccactcttgctggcccggtaatcacttgtggacccgtattgaattggttc
gatttggataatcgtggacatcgtctacttgtttcagaggactgtgccatcaatacccct
gcagtggctgctgcctacgctgttacacgctatgctaaacaagcttcagatgaaattagt
tttgaggtgggtgatatgatctcagtcattgacatgcctccaccagatgagtcaatttgg
tggagagggaaaaagggatttgaagtgggattctttccatgtgaatgtgttgaagtcatt
agagataaagtcccaagtggtttaaatcttccaggatcaaccccatcggatcataataat
acatttaagatgatttcatcatcttcaaattcctcttcaggtagtgaaggagaagaagaa
gaagatgtagtggatgggatttctccttcttctgcttcttcggagcccacaaaacctgtt
ctacgaaaacatggaaaattaatatccttctttaggagttttattctatctcgtcccacg
agaggaaagttgaaaaaatccggaattttgagggaaagagtctttggatgcgatctctct
gagcatttattgaatacaagccaagagattcccaaagtattatttcattgcgcggaattc
attgaatcaaagggtatcattgatggtatctatcgattatcgggtatagcgtcaaacata
caaaaacttagagttacttttgatgaagatagagttcctgatttatacaatgacaggagt
gttcttcaagatattcattgtgtgtcctcactattgaaaatgtattttagagaactaccc
aatcctatttgcacgtatcatctctatgaaaaatttgtagaagctgcaaaatcatctgag
aatcaaagacttattctattgagggatgttgtacaacaattaccacctccaaattatcgc
acactagagtatctgtcccggcatttgtatcgtgtatcactcagaggaaatgaaaccgga
atgacagcaaaaaatgttgccattgtctgggcacctaatttactacgatcgaaatctttg
gaagttggtggtgtggcggctcttcaaggtgttggtatccaagccgttgtcacggagtat
cttattcgttattgtgaacttatttttagtgaaaaaatgcctacttatactggtagtgcc
tgtaccagtagtagtaataattctaatagttcatccagtggtagtcaacagtctcaagaa
acacccaaaaaatccagaccaaagtccttagcaatatccactcccactaaattactttca
ttagaagaagcaagaagtagagcccttactgctgcatcagggagctatgttcctcaagaa
cagcggtatattgaagtcggaggtggtcctagcaatcttccgcccacctatcatactgta
attgatctacccaataatagcattcgcaaacattattcagagagagccagttctaggcat
aggaaatccccggtaggctggaaaactatatttacgtctggaaaaatcaaatataagtcc
aataacaaaatatcagactcagaacatcttacaaataatgacgaaagtgaattttcaact
actacaactgatgaagatcaccaaaaggtaactgccaccgcgtcattagatacaagctct
tgtgcaatgaattttaatgcaactttaagacctgtcaaaagcgctgagagtcttatacct
caaagtgaacgtagctttaaggacttgtcctccagctcatctagtcctaattcaggtgaa
gtgaaggatgaggttgcttctctagaaactgttactcgtgctattctcaagactaccgca
tctagggatagccccaaaactcatagtcgatccagttcacatgattcatattttgaacga
actccactctcttctctttcattcaagtcctctaaaccaattagttctgactcggagagt
ccagtggatcccaaatcatcttccctagatctctcagaaattcaagtgaattttgaattg
gaagaaaacgaaatgaagatttttagtgaggacgaggacgctctcatgtctacgtcattt
acttcaattgacgatgatgatgacgaagctaggcctagttttcgtcgcatttctcgtcat
aacagtcgaaaatcggatcaacttcggataccgattttcaaaggtcctaaggaacaagga
gcaccttcttcccccgttctcaacaacaataataataataacagtgtcttaaacagtgaa
gtttcacccaaaaagaaaaagtcagatttcactcctggaacgtctcctaacgctaatcta
gtcaaaagatcaaaaatggaaacagaaactgaagaaattatgaacccgtccttagccatg
tccccctctattaaatttatcgatgacaggcctgcaagtgctattgaggtagatcaagag
tctttgtcagattgtttggaacatacttcaaatgaagagaaggaagaaattatacaatgt
gaaacagttgctatttttgatgaaaaatcggaaaaatctgaaattaagaattccattgag
atggacagattatcttttgtttttagcaacgaaaatgattttgtttgtaatgtttcgcta
aatgaggataaccttgataaactggtgattgccgagattcataacgatccccaaacaaag
aataatgcttctgtagctggtgataatgaagaaacagatcaagaagagccatcaattagc
actgtaaaagagctctctcttgaagtattttctcctgatgaaacagacaatacaaaagat
gaatcatcagataatcccataaaagatgatcaaataattgtagaaagcaatttagaggat
gatgggcactccattatagaaaattcaatagagaattcatctatttcaagtcctattgaa
actagttattccattgcgggtgcaacagtgtccgaaaatgagagcttttctttaacgtca
tttgaagatgatttcaaaccaaatggtgaagaagaagtagaacaaggagaacgtcaggat
aaagaggatacaatacctaaattatactcaacctccccaacacaagttactgaatttaaa
aaggaggaccctttatctcctcccaagtttacatcagaagaaataataattcgtcccttc
acccatgaatctgttgtagcaatggagatagatgaagattcaaatattacttttatcaag
gatccttcctcatcaactgatcaacagcatccaagtgtcctcatggaaatagaagaaaat
agtatcaaagagttaatgactgctgtccctgttcatgttcttgaggacggatgcgacgaa
gaagatgatgaagaggaggaggaggaacagttgggtcatttcgactatcagccaattcaa
acatcttcttgctcctcggattcatactcactcctcctggaagatatcaaatccagtggt
ggtctttccacatcttataagaagaagggaacacaacagtactatactcgctctaatagc
gtggaggaaaacaatggcagaatgagttctcagggtattcctgaattagaggccaaattg
aatgaatcaaatttgtttaaggccagtcgggcagtgtgcaagtcagaggattttcctaaa
aaactctcaaagagaaatacagaaacacaaatattatctcctggggatgggggagatgag
gttcctttagtcagaagaaattctattcataatgttccttatgtcgatgtaaatgaccct
ggtacaagggagcgtatggagcgttataaagaagagcgtagatctctttttagggcgaaa
tataaggttgaagattatagggtgggaagtagtagtgggggtaacagcagtggacataaa
gcaaatacaaatatggtcagcaacccatcatcacctataaaaataccttcaccctcatcg
ccatctctattcgatattactacaacgagtgagagcactatcaaggataaaaagccacca
ctggaaaggatatccacacaaattcaaaatcatttttattcttgttctgcgacgacagcc
acaactacgaatgtgttggagcataattataaaaatagtaatcatacaaaagtgaatgac
aataataacctccttctcaacaacgaatataacaccaagcttacaaaaccgactttgagt
ctaccaaggaaaaacaattcaccctcctcctcctcctcctttggtctcattaatgaagac
gtaaatgtgaaggagcgagctgcaattttcgggaaaaagagccgatccaacgaagaaaac
gagtcgaagcggaaatcactgcctatttcttcctccaatagtaatctacgcctgctaaac
aacaatggtagtagtagcagtaattcagtatcgagaagtcggagtagtaactccggtcat
ttggacaagtcccccgtttcaccaaataaaattaaaaacattgctgcattgtttgaacag
aaaagttag
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