Lepeophtheirus salmonis (salmon louse): 121126512
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Entry
121126512 CDS
T08214
Name
(RefSeq) coatomer subunit beta-like isoform X1
KO
K17301
coatomer subunit beta
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsm04131
]
121126512
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsm04147
]
121126512
Membrane trafficking [BR:
lsm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121126512
Exosome [BR:
lsm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121126512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
HEAT_EZ
MMS22L_C
Arm
Motif
Other DBs
NCBI-GeneID:
121126512
NCBI-ProteinID:
XP_040577769
LinkDB
All DBs
Position
11:complement(10466224..10474794)
Genome browser
AA seq
989 aa
AA seq
DB search
MSSAELPSYTIIQIPSDFEVPNEIGLKADFEKGDTKIKIEALKKTIYMILSGEKVNHLLM
NIIRFVLPSQDHMIKKLLLIFWEIVPKKTSDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEPELIEPLMPTIRSCLEHRHSYVRRNAVMAIFTIYKSFDFLIPDAPELIANF
LEGEQDMSCKRNAFMMLIHADQDRALAYLSSCIEQVQNFGDILQLVIVELIYKVCLANPM
ERSRFIRCIYSLLNSNSPSVRYEAAGTLVTLSTAPTSVKAAASCYIELIVKESDNNVKLI
VLDRLMAMKESPSHEKILSELVMDILRVLSSTDLEVRRKTLNLAMELVTGRTVSEMVLIL
KKEISKTHGAAVETAESGSGSGSRSSGDEGDTGKYRQLLVRTLHTCCIKFPDVAPDVIPL
LMEFLGDIKDLAAQDVLIFIREAMAKFPDLRQIILDKLLESFLTIRNSKVHRAAIWILGE
YCESPKDIQAVMNEIRQSLGELPIVEDEIRKAAGEEKLEDESTSIVAPSSGPQKLVTADG
TYATQSAFVTQSSSSSGKSKQADRPPLRKYLMDGDFFIGAALAPSLTKLALRYIAVVTDE
KKRNRFVAETMLVITSILHLGKSGLPTKAISNDDADRISLCLKALVDDNEIIKNIFQEEC
RNTLVEMLEAQTSTTKEVATDEKQKQLERYERICEQPDKPIKFMQLCGGVDSAASGDIFE
LGLSQALGTTKKSGSSSFSSTKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTA
DTLQSCTLELATLGDLKLVEKPQPVVLSPNDFATIKANVKVASTENGIIFGNIVYDCTGA
SSDRNVVVLNDIHIDIMDYIVPASCTESEFRSMWAEFEWENKISVVTSITDLHEYLMSLL
KSTNMKSLTPEKALSGECGFMAANLYARSIFGEDALANVSLEKNLQKPDSTVTGHIRIRA
KSQGMALSLGDKINLSQKVRGKKAVDAQG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgcggagcttccgtcctatactataattcaaatcccctcggatttcgaggtc
cccaatgagataggcctcaaagcggatttcgaaaaaggggacacgaaaatcaagatcgag
gctctgaaaaagacaatttatatgatccttagcggggaaaaagtgaatcatcttcttatg
aatatcattcgcttcgttttaccttctcaggatcatatgattaaaaagcttctccttatt
ttttgggagattgttcctaaaaaaacatcggacggaaagttacttcaagaaatgatcctt
gtttgtgatgcgtatcgaaaggatcttcaacatcccaatgaattcattcgaggctcaaca
ctacgatttctatgtaaattaaaagaacctgagctcatcgagccacttatgcccacaatt
agaagttgtttggagcatcgtcattcctacgttcgacgcaatgctgttatggctatcttt
accatctacaaaagctttgatttcctcattcctgatgctcctgagctcattgctaatttt
ttggaaggggagcaagacatgtcatgcaagaggaatgcatttatgatgctgattcatgct
gatcaggatcgtgcccttgcgtatttgtcttcttgtatcgaacaagttcaaaactttgga
gatattctacaattggttattgtagaacttatttacaaggtctgcttagcaaatcccatg
gagagatcccgtttcattcgatgcatttacagcttattaaactcaaactctccatctgta
agatatgaagctgcaggtaccttggtaacactatccactgctccaacttccgtgaaagct
gcagcctcatgctatatcgaattaattgtgaaggaaagtgacaataatgttaaattgatt
gttcttgatcgtttaatggctatgaaggagtctccttcacacgaaaagattttaagtgaa
ctcgtaatggatattttgagggtattatcatctacagatcttgaagttcgtcgaaaaaca
ctcaatttggcaatggaattggtcacgggtcgaactgtttcagaaatggttcttatttta
aagaaagaaattagtaaaacacatggagctgcagttgaaacagcagaaagtggatctgga
agcggatcacgttcatcaggggacgagggagatactggaaagtaccgtcaactcctcgta
agaactctacacacatgttgcattaaattccctgacgttgcaccagatgttatacctctt
cttatggaattccttggggatatcaaagatcttgcggctcaagatgttcttatatttatt
agagaagcaatggctaaattccctgatctgagacaaattatcttagataaattgcttgaa
tccttcttaactatacgtaattcaaaagtacatagggcagccatatggatccttggggaa
tattgcgaatctcccaaggatatacaggctgttatgaatgaaattcgacaaagcttagga
gaacttcctatcgttgaggatgaaattcgtaaagcagcaggggaagaaaagttagaggat
gagagtacctcaattgtagcaccctcatctggtcctcaaaaacttgttacagcagatggt
acttacgctacgcaaagtgcatttgttacacaatctagttcttcatcagggaaatccaaa
caagctgacaggcctccattacgaaaatatcttatggatggagatttctttattggagct
gctcttgccccatcccttactaaattagcactaagatacattgctgttgttactgatgaa
aaaaaaagaaatcgtttcgtggcggaaacaatgcttgtgataacatccattcttcatctc
ggtaaatctggattaccaactaaggccatttcaaacgacgatgccgataggatctctctc
tgtttgaaggctcttgtggatgacaatgaaatcatcaaaaatatattccaagaggagtgt
cgaaatactcttgtagaaatgttggaggctcaaacatccacaacgaaggaagttgccact
gatgaaaaacagaagcaattagaacgttatgaaaggatatgtgaacaaccggataagcct
attaagtttatgcaattatgtggaggagtagactcagccgcttctggagatatctttgaa
cttggactaagtcaagccttgggaacgactaaaaagtctggatcatcatccttctcttca
actaagttaaacaaggtcactcaattgactggtttttcggatcctgtttatgctgaagcc
tatgttcatgtaaatcagtatgatattgttttggatgtccttgttgtcaatcaaacggct
gatactcttcaatcttgtaccttagaactggcaaccctgggggatttgaaattagttgaa
aaacctcagcctgtggttctttctccaaatgattttgccacgatcaaagccaatgtcaaa
gttgcctcgactgaaaatggaattatatttgggaacattgtctatgactgtacaggagcc
tcttcggatcgcaatgttgtcgttctaaacgatattcatattgacatcatggattatatt
gtaccagcctcatgcacagagtctgaattccgctctatgtgggctgaatttgaatgggag
aacaagatttccgttgttacgagtataacggatctgcatgaatatttaatgagccttctc
aaaagtacgaacatgaagagtttgacgccagaaaaggccctttccggagagtgcgggttt
atggcggcgaacctgtacgccaggtctatctttggtgaagatgctcttgctaatgtgtca
ttggaaaaaaatcttcagaaaccagattccactgtgacaggtcatatccgtattcgagca
aagtctcaaggaatggctctttccttaggggataaaattaacttatctcagaaggtgagg
gggaaaaaggctgtggatgcacaaggatga
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