Lepeophtheirus salmonis (salmon louse): 121127759
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Entry
121127759 CDS
T08214
Name
(RefSeq) nuclear receptor corepressor 1-like isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121127759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsm03036
]
121127759
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
121127759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121127759
NCBI-ProteinID:
XP_040579177
LinkDB
All DBs
Position
13:complement(36521621..36543055)
Genome browser
AA seq
2386 aa
AA seq
DB search
MSTVRSMDIRGGGGGSGSGGGGSPSLGPPNSAGPNSAVATGSGGPSPHPSLYGRLSHPRQ
PLGAPYLPSSSSSSGPGNDHLKGRSSSNNNNNINVSSNPGGGGSNNYCRSSNSPSVVSSR
NSSSAVNSPYPPQLVSGFPGSSRPPPSGGGAPDHPASMRYVQYSPSPAGPSSSTRHPPPH
SVGGGGSPYESATVYIQSQGGDRIEIPVTVAAAAAAAQQQAHSDSRHSNHPAPRMTLRPT
YPNSQASSLYHNDNYMRDVQAVAVAAASAHRSQPAPPSSLPAGIHLSSIHSQSPSSLSAS
HGMEIPPKRPRMDLGHPNQISSSPAPSLSTPLRIDTREPNKDSGYHPQVEAISPTGPEAS
AERDELRSTKDDLLQKITKVDREIAKAESQIAKLKKKQQELEDAANRPSTDAIEEDEKPK
NQSIAQIIYAENRKKARDAHAMLDKLAPHNELPLYNQPSDTVSYHENKRNHAHFKKQLVE
YFKKRNEERESRERHMTETYSKLTTQWLKKVEKLENSKKRREKEQRARDLYEKIFPELRK
QREDKERDHRLGTRGAVRSEADIENVIERLQEQELENKKMHSYAVIPPLLLPQEERRRKF
INNNGLILDPLKEYEDRKYLNIWTEEEKQTFKERFLQHPKNFGVIAQSLERKNVSDAVQY
YYLSKKTESYKQIIRKNRTGSRRRKVQPTAPEVIGPNAHGVVTRHRNREQEKLEPNENND
ISNRSTPVLKSENNMKSEDYNEEEGDKKFKKEAIDTSDDEESNQIKSGPPHPCAVCKVTV
EASRPVHSKSYAIQLGLREEDVGSDSRVCNKCHCIALRKRHGHCPVPTCTSTKGRGLKVK
NRFRHLPSKWAELPDEIKGPIIAEMQLPEGIKKCCSGCVTRLTRKISQASSGISNQSNTD
INVKNEEDAKWSDEDVELMKNCLVEFGRNWTHVAEKIRDKTPDQCKKFFYNNRKKFNLDK
IVLDFKRANQSGDQPPVLSTDEESGSSTSSCDEETTYNNVNTTASTSASTVVMHVSSAST
STLIPTTTTTPSGASTETSSRPTENDIQVVKSEVKSIENHIKSESGETAPTLPPPPPVVP
AKTLIKEEDNDSSTTMSADEVEINPPRSIYSGQQQPYLLSGQGGVPPNVPGSRDMARSYS
CRQFQPPPPPSHHHHHHRSLPPPPQPTLNDNSLQNGPVREVMTVRDLMSNVIERQLSNNQ
QQHHHSNSSIGGSIANPTIHTILENSGPAPHKTNYIRDRIGLNPLQKSSTLTGNSMAPPP
PPPQLPTMNSNNDCETLDLSMPRRREPSPINNNGGPTTSSSSSLQYREPVVIHRSSTSSY
SEGNRASPPPAHSGSKAVTVPDLYRDIGPGSRPPPQVYPPDGVMNRSMSSPHIINRASPR
GPPPPLPPVSNLRFSVRQSNPASMMSSSCSTTNKGGVVPQAKPNVKVEKPLMIQTGSITQ
GTPVNHPSRGASYEPLLRVTPQDKPTIGGSITHGTPVYDKKDARLYDRKVEYYGGRTISP
GGNPSVGGSRYPQSSSSSIVINNEPQSQLSSRAVIMNDFAMARSTEMQRRPDSREQPRSA
SPRYQNRDLSPRSRNVVDQQRIMTDPRATITAAVERSGGPRDSRYNMSHHHHHRVIPDVR
GDPKAELATLTRGSVEIRGDPRAGLDHPSRGSSSVIDYRNEGSHSRRHDSSPSISRPVHD
HRAAIERNRALSAIVASAASGSYPPGYPMYMTPDGKYVPMHPRPSQSPSRSTPPPPPPSS
SSTSSSQQARVIQSRGNLVGGITSGKPVVSASRDMDYYRGHPEVTISKTNSGGPRMGVCT
IYNDQNPLNSLVDVAVKQPKLPDPKLLDQQHKDHGGGKSAVTAAAVAALHQQQTRMVAAA
AAAAAQQQQQQKFVDRYLPSASNTQQLEAALAVVAAASSSAEFSKSGMVQAEQERQKQQN
LYKSLIQNEYNSPSGVSGREGGGPSSSKSSSSLHVQSAPSPSSAITPHKIIDAIIHQQHQ
QQQQQQEFNQQQLMSKYRRSPAVMDSNNLDLDKQQPSPYKVPSRSPSVKSDNNANGPEDS
TASSSRPGSRSGLSLMPQVTLEHENYMKKNAVEDYHWRRNSEQQQSRQTPPSRIGGGSMA
SDERQITRVIQQQQQQQLPLRPDKPPSRPGLEPISPPNPSDQPQQSINLTRYMDPRRRIQ
ASHDLGMGSSRDGSSSSTLTKVPHPSHPPPGIFTMEYVNNKIVEEMKKNDSSSGSSSSVI
VSTPPPLPLSHPPATTSSVMGGGGGGGGIANTSTLSSSSMSMAMTMSMAPPVSKLLPNAK
NNMASSSTSSSGSTTSISVSASSKRAHDEEIESPRKRLRDDSELLPDSPGSGEMVIDESA
RPDSVSSHKTASPAPLNRPPLNEQQQPPPQQQPPSAPRYEPLSDDE
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggttcgatccatggatatccgaggtggtggcggtgggagtgggagcggtgga
ggggggtcaccctcactgggtcctcccaacagtgctggccccaatagtgccgttgctacg
ggtagcggtggaccctcgccgcatccatcactctatggacgactcagtcatccgagacaa
ccccttggagccccctatctcccatcctcctcgtcttcctcaggaccaggaaatgatcat
ctcaaaggccgttcatccagtaataacaataataacattaacgtctcctctaatcctgga
ggaggaggaagcaacaattactgtcgatcatcaaactccccttctgtcgtctcatcacgc
aactcctcctctgccgtcaattctccatatcccccccaattagtctctggattcccaggc
tcttcgcgaccgcctccaagtggcgggggtgctccagatcaccctgcttctatgcgatac
gttcagtattccccatcacctgcgggtccttcttcctctactaggcatcctccacctcat
tcggttggtggtgggggatcaccctacgaatctgccactgtttatattcaaagtcagggt
ggtgatcgtattgaaatcccagtaacagttgctgcagctgcagcggccgcccaacagcaa
gctcattcagatagtcgccattcgaatcatccagctcctcgaatgactctacgaccaacg
tatccaaactcacaagcatcttcattatatcataatgataattatatgagagatgttcag
gctgtagcagtagcggctgcatcagcacatcgatctcaaccggctccgccgtcctccttg
cctgctggaattcatctatcctcgatccattcacaatcaccgagttccctctcagcatcc
catggcatggaaattcctcccaagagaccccgcatggacttgggtcatcctaatcagata
tcctcatctccggctccctctctttcaacaccccttagaattgacactcgtgaaccaaat
aaagactctggataccatcctcaggtagaagcgatttcccctacaggaccggaagcttcg
gcggagcgggatgaattgagatccactaaagacgatcttcttcaaaaaataacaaaagtg
gatagagaaatagctaaggctgagtctcaaatagcaaagctaaaaaagaaacaacaagaa
ttagaggacgcggccaatcgaccctctacagatgcaattgaagaagatgaaaagccgaag
aatcagagtatagcccaaatcatctatgctgagaatagaaaaaaagctcgagatgctcat
gccatgttggataaacttgctcctcataacgaacttccattatacaatcagccctcagat
actgtttcctaccacgaaaacaaaagaaaccatgctcattttaagaaacaattagtggag
tattttaagaaaagaaacgaagaacgagagtctcgggaaaggcacatgacagaaacttac
tccaagttaacaacccagtggctaaagaaagttgagaaattagaaaactcaaagaaaaga
agggaaaaggaacagcgtgccagggatttatatgaaaagatatttcctgaattgcgtaaa
caaagggaagacaaagaaagggatcatcgtcttggcacccgaggagctgtcagatccgaa
gcagatatagaaaatgtcattgaaaggcttcaggagcaagagttggaaaataagaaaatg
cactcttatgcagttatccctcccttacttctacctcaagaggaacgtcgacgtaaattc
attaataacaatggactcattcttgatcctcttaaagaatacgaagatcgtaaatatctg
aatatatggacggaagaagaaaaacagacctttaaagaaaggtttcttcaacatcctaag
aacttcggtgtcattgctcaatctttggaacgaaaaaacgtctccgatgcagttcaatat
tattacctttctaaaaagacagagtcttataaacagattattcgaaagaatagaactgga
agtcgtcggcgtaaagttcaacccactgcaccagaagtcatcggtcctaatgctcatgga
gttgtcactcggcatagaaatcgtgaacaagagaaacttgagcctaatgaaaataatgac
atttccaacagaagtactcctgttctcaagtccgagaataatatgaaatccgaagattat
aatgaggaggaaggtgataagaaatttaagaaagaagcaattgatacatcggatgacgaa
gagtctaatcaaatcaaatctggaccccctcatccatgtgcagtgtgtaaagtaactgta
gaagcctcaagacccgttcatagcaaaagttatgcaattcaattgggtctacgagaagaa
gatgtaggctcggattctagagtatgcaataaatgtcattgtattgctcttcgtaaaaga
catggccattgtccagtccctacttgcacttccacgaagggaaggggcttaaaagttaaa
aatagatttcggcatctcccttctaaatgggctgaacttcctgatgaaatcaaaggacca
atcattgctgaaatgcaactcccggaaggaattaagaaatgttgctctggctgtgttacc
cgacttactcgtaaaattagtcaagcctcttctggtatatctaatcaaagcaatacggac
atcaatgtcaaaaatgaggaagatgctaaatggagtgatgaggatgttgaattaatgaag
aactgccttgtagaatttggaaggaactggactcacgttgctgaaaaaattcgagataaa
actccagatcagtgcaaaaagttcttctataacaacaggaaaaaattcaatttggataaa
attgtcttagatttcaaaagggctaatcaaagtggcgatcaacccccagtactttccaca
gatgaagagtctggctcatccacatcttcttgtgacgaggaaacaacttacaacaacgta
aatacgacagcctctacttcagcctcaacagttgttatgcacgtatcttcagcctctaca
tccactttaattccaactactactacaacaccatctggagcctcgactgaaacatctagt
cgacccacagaaaatgacattcaagtagtcaaaagcgaagttaaatccattgaaaatcac
attaaatccgagtcaggggaaacagcaccaacccttcctcctcctccacctgttgttccc
gctaagacattaatcaaggaggaagacaatgatagttccactacgatgagtgctgacgaa
gttgaaatcaatccaccaaggtctatatactcaggccagcaacaaccctacttgttgtct
ggacagggtggtgtaccacctaatgttccaggaagtagagatatggcgcgatcctattct
tgtcggcaattccaaccaccaccaccaccgagtcatcatcatcaccatcaccgatcattg
ccaccgccaccacaaccaacattgaatgataactctcttcaaaatggtcctgtaagagaa
gtgatgactgttcgtgacttgatgagtaatgtaattgagaggcaactctccaacaaccag
caacagcatcatcatagtaactcttccataggaggaagcattgccaatccaacaattcat
actattttagaaaattcaggacctgctcctcataaaaccaattatattagagaccggata
ggactaaatccccttcaaaaaagctctacgcttacaggaaattccatggctcctcctcct
cctccaccacagctacctaccatgaatagcaacaatgattgtgagacattagatttgagt
atgccaagaaggagggagcctagtcctattaataataatggaggtccaacgaccagctcc
tcctcctctctacagtacagagaacctgttgtgattcatcgttcttcaacttcctcttac
agcgaaggaaatagagcttcaccgcctcctgctcattctggaagtaaagcagtgacagtg
ccggatctttacagggatattggccctggatccagaccacctccccaagtgtatccacct
gatggagtaatgaatcgttctatgtcctctcctcatataatcaatcgtgcatctccaaga
ggccctccaccccctcttcctccagtatctaatttgagattcagtgtacgtcaatcgaat
ccagcttctatgatgagtagtagttgtagtactactaataaaggaggagtagtacctcaa
gcaaagcctaatgtaaaagttgagaaacctctcatgattcaaactggctcaattacccaa
ggaactccagtcaatcatccatcaaggggagcaagttacgaacctcttcttagagtcact
cctcaagataaacctaccattggtggatccataacgcacggaacacccgtctatgataag
aaggatgctcgtctttatgatcgaaaagttgaatactatggaggaaggactatatctccc
ggaggaaatccaagtgtcggcggaagcaggtatcctcaaagctcttcatcctcaattgta
ataaataatgaacctcaatcacaactaagttccagagccgtgataatgaacgattttgct
atggcaagatcaacagaaatgcaacggagacctgattcaagagaacaacctcgctcggcg
tctcctcgatatcaaaatcgtgatcttagtcctagatctaggaatgttgtggatcaacag
cggataatgacagaccctagagctacaataactgctgcagtggaaagaagtggaggaccc
agagactctcgttacaatatgtctcatcatcatcatcatcgtgtgatacctgatgtgaga
ggtgatcctaaagcagaactggcaactcttacacgagggtcagttgaaattagaggagat
cctagagcgggtctagatcatccatctaggggaagttcatctgtgattgactatagaaat
gaaggctcacattcaagacgccatgatagttctccctctatttctagaccagtgcatgat
catcgtgccgcaattgaaagaaatagagcattatctgcaatagttgcttcagctgcatct
ggaagttatcctcctggatatcccatgtatatgactcctgacggaaagtatgttcccatg
catcctcgtccctcgcaatcaccttcccgctccacgccaccaccacctcctccctcgtct
tcatccacatcctcatctcaacaagctcgtgttatacagagtagaggaaatttagttggg
ggaataacctctgggaaaccagttgtgagtgcatctcgagacatggactattatcgcggg
caccctgaagtcaccatttctaagacaaatagtggtggcccacgcatgggagtatgtacc
atctacaatgatcaaaatcctctgaattctcttgttgacgttgcagtaaaacagcccaaa
cttccagatcctaaattactggaccaacaacataaagatcatggtggtgggaagtctgca
gtcactgccgcggctgtagcagctcttcatcaacaacaaactagaatggttgctgcagca
gccgcagccgctgctcagcaacagcagcagcaaaaatttgttgatcgctatctcccttca
gcatcaaatactcagcaattagaagcagctctggctgttgtagctgcagcttcatcctcc
gctgaattttctaaatctggaatggttcaagctgagcaggaacgtcaaaagcaacagaat
ctgtacaaaagtttaattcaaaatgagtacaatagcccctctggagtgagtggtagagaa
gggggtggtccttcctcctcaaagtcatcttcatcgttacatgttcaaagtgcaccctct
ccctcatccgcaattacgccacataaaatcattgatgcaatcatacatcagcagcatcaa
caacagcagcagcaacaggagtttaaccaacagcaactcatgagtaaatatcgtcgcagc
ccagctgttatggactcaaataatctggatctggataaacaacaaccctctccctacaag
gttccctctcgaagtcctagtgttaagtctgataataatgccaatggcccagaagactct
acggcttcctcttctcgcccaggctctcgctctggactttccctaatgccacaggttact
ctagagcatgaaaattacatgaaaaagaatgctgtggaagactatcattggagacgaaat
tccgagcaacagcaatcccgtcagactccaccctcacgcattggaggtggctctatggca
tccgatgaaagacaaatcacaagagtaattcaacaacaacagcaacaacaactccctctt
cgtccagataaacctccttcaagacctggactagagcccatttctcccccaaatccgtcg
gatcagccacagcagtcaataaacctaactcgatacatggatccacggaggcggatacaa
gcttctcatgatttgggaatgggaagtagtagggatggatcatcatcatctacactcacc
aaggttcctcatccttcgcatcctcctccagggatattcacaatggagtatgtgaacaat
aaaatagtggaagagatgaaaaagaatgattcctcatccggttcctcctcttcagtgatt
gtgtcaactcccccaccccttcccctttcacatcctcctgcaactacatcctcagtaatg
ggtggtggaggaggaggaggaggtatagcaaatacatccactctttcttcctcctctatg
tcaatggccatgactatgtctatggctcccccagtgtccaaactcttacccaacgctaaa
aacaacatggcttcttcatctacttcctctagtgggagcactacttccatctccgtatct
gcgtcttctaaacgtgctcacgatgaagagattgagagtcctcgaaaacgacttcgagat
gacagcgagcttttgccggactctccaggctcaggggaaatggttatcgatgaatccgct
cgtcctgattctgtttccagtcataaaacagcctctcctgctccactcaatagaccaccc
ttgaatgaacagcaacaaccacctccacaacaacaacccccttctgctcctagatacgaa
cctctttcggatgatgaatga
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integrated database retrieval system
