Lucilia sericata (common green bottle fly): 119600251
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Entry
119600251 CDS
T08270
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03022
Basal transcription factors
lsq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119600251
09124 Replication and repair
03420 Nucleotide excision repair
119600251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsq03021
]
119600251
03400 DNA repair and recombination proteins [BR:
lsq03400
]
119600251
Transcription machinery [BR:
lsq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119600251
DNA repair and recombination proteins [BR:
lsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119600251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
119600251
NCBI-ProteinID:
XP_037806293
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MSDSKSSRSSSQVSLLANKPANLQCKDFQEYLRTRSADTLERLYNYPTICLAVYRELPEI
ARQFIIRILFAEQPVPQAVVASWGSQHYAKEQQVSTNTLTELNVWRTTAIPGGLSAWELC
PTFKKNLKIALLGGGKPWSMSHTLEKDSKPRDIAFLDQYAMSRWRCVLHYMVGTGGSGKS
QESEVISPDAVRILLHANLMKREDSVITITRQGFQFLLLDTQSQVWHFMLQYLDTCEERG
LSLPECLSMLFQLSFSTLGRDYSSEGMSPKMLTFLQHLREFGLVFQRKRKEGRFYPTRLA
LNVTNKAATVPAVVLEEEKSQESGYIVVETNYRVYAYTDSPLQVAVLGLFTELLYRFPNL
VVGVLTRDSVRQALRGGITADQIISYLEQYSHPNMKLTESAIKSKSPLPPTVVDQIKLWE
LERNRFTYTEGVVYNQFLSQADFVTLRDYAQSISVLVWQNERTRTMVVTKNGHDDVKKYW
KRYSKSGG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactctaaatcctcacgttcttcgtcacaagtttctctgctggctaacaaaccg
gccaatttgcaatgtaaagatttccaagaatacctgagaacacgttctgcggataccttg
gaacgactatataactacccaactatatgtttagcggtctatagggaactgccggaaata
gcgaggcagtttataatacgcatattatttgccgaacaaccggtgcctcaggcggtggta
gcctcttggggttcacagcattatgccaaagaacaacaagtttccactaataccttaact
gagctaaatgtttggcgcactactgccatcccgggaggtttatcggcctgggaattgtgt
cccaccttcaagaagaatctaaaaattgctttattgggaggcggtaaaccctggtctatg
tctcatactttggaaaaagattccaaaccacgtgatatagctttcctggatcaatatgcc
atgtcacgatggcgttgtgtgctgcattacatggtgggtacgggtggttcgggtaaaagt
caagaaagcgaagtcattagccccgatgctgtgaggattctattacatgctaatcttatg
aagcgtgaggactcggttataaccataacacggcagggattccagtttctcttgctagat
actcaatcccaggtatggcactttatgctgcagtacttagacacctgtgaagagagaggt
ctatctttgcccgaatgtctcagcatgttgtttcaacttagtttctctactctgggtagg
gattacagttctgagggaatgtcacccaaaatgttaacgtttctgcagcatttaagagaa
tttggtttagtatttcaacgcaaacgtaaagagggcagattttatcccacccgtttggcc
ttaaatgtcaccaataaagctgctactgtaccagcggtcgttttggaagaggaaaagtcg
caggaaagtggatacatagtagtggaaacaaattatcgtgtttatgcctacaccgattca
cctttacaagtcgccgtcttgggtctctttacagaattactgtatcgttttcccaattta
gtggtgggtgtgttgacacgcgactctgtgcgccaggccctcagaggcggcattacagcc
gatcaaattattagctatttagaacaatactctcatcccaatatgaaattaacggaatcg
gctattaagtcgaaatctcctttaccacccacggtagtggatcaaattaaactgtgggaa
ttggaacgtaatcgttttacatataccgagggtgtggtatataatcaatttttatcgcag
gccgattttgtaaccctacgcgactatgctcaatctattagtgtgctggtgtggcaaaat
gaaaggactcgcacaatggtggtgacgaaaaatggtcatgatgatgttaagaaatattgg
aaaagatactcaaagagtggtggctaa
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integrated database retrieval system
