Lonchura striata domestica (Bengalese finch): 110468126
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Entry
110468126 CDS
T05897
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110468126 (TRAPPC8)
Membrane trafficking [BR:
lsr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
110468126 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
110468126
NCBI-ProteinID:
XP_021381404
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All DBs
Position
2:complement(108354340..108406986)
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AA seq
1470 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPLVAALCSEEAERLTRRNNLSFAELVRPFCRLTSEVHMRDPNN
QLHIIKNLKIAVNNIITHPPQPGAIRKLLHDVVSVSQPAEGLVANVITAGDYDLNISDRS
VKASVPWYSNWKETLMELNTSTFYSATTPWFESYRECFLQSMPASDHEFLNHYVACMLVV
SSSEPDPVEQFLKLSQEQHRIQHSSEYSYPKWFIPNTLKYYVLLHDVSTGEEQRADSIYE
EMKQRYGTQGCYLLKINSRVSNRGADEQIPDPWSQYLQKNTIQNQDSYEDYTVSNKSTDH
LISDGIDSEIKDGLSNNFKTHPLQLDHPSGSLDSTDYMKASTSVQDSKKSNSGTPHGACL
TLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFFATKKWFSGSKVPE
KSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLNDQAMLYAA
GALEMAAVSAFLQPGAPRPYPAHYMETAIQTYRDICKNMVLAERCVLLSAEILKNQSKYS
EAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRFSKAGQKKHA
LRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILINDSKQPPAQQG
AFLREYLYVYKNATQASPDGPLPQLPLPYINSSATRVFFGHDRRPAEGEKQAATHVSLDQ
EYDSESSQQWKELEEQVVSVINKGTIPSNFQPTQFCLNRYSDNSKFPLAVIEEPITVEVS
FRNPLKVPLLLTDLSLLWKFQPKNFSVKCDGETKEQGTCDEDMVGTEAIAEFLINSEETK
VARLKLFPHQTGELHILGVVYNLGSVQGAVSLDGIDPSIGLQTGKFVSNGLSVRGRQDLE
IQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEIRKAYVEFVN
VSKCPLTALKVVSKHPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDPTSVRTALLSSA
SSADFGVGTGGSPEVIQVPLPDAVLLPGASVQLPMWLRGPDEEGVHEINFLFYYEGIKKH
SKMCHRVLRHTAVICTSRSLHVRATVCRSNALGDEEGRGDTMLLFVDVENINTSETGVKE
FHIAQVSSNSKHWKLQKSVNISGDKDTKLASRERAKLCFKAVRCKNSEENYTFADIVFGN
EQIISSASPCADFFFQSLSSEFKRTHVQSHTHTSQRAVKQSFDETVRLVQRCSEVDLNIV
VLWKAYVVEDSKQLILEGQHHVALNTVGKEAFSFPQKQGFKKILGNSDWEDLEQELPETV
LLKFFRPENTPVPARPTPEQLSNLIKTSLHYPESFSHSFHQKSLCLVPVTLLLSNCSQAV
VDVMIDLRHKPTSSEALEIHGSFTWLGQTQYKLQLKGQEVYSLQLKACFVHTGVYNLGTP
RVFAKLVDQVTLFETSQQNSMPALIIINNI
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagcggctcacccgcaggaacaacctcagcttcgcc
gagctggtcaggcccttctgccgcctcacctcggaagttcacatgagagatcctaataat
cagcttcacatcattaaaaatttgaagatcgctgtcaacaacatcattactcacccacct
cagcccggtgccattcggaaacttttgcatgatgttgtgtctgtcagtcagcctgctgaa
ggactggtagctaatgtgatcacagctggagattatgatctcaacatcagtgatcgctca
gttaaagctagtgttccttggtacagtaattggaaagagacactgatggaactgaacaca
tccacgttttattcagctactactccttggtttgagtcttacagagaatgctttcttcag
tccatgcctgcatctgatcatgaattcttaaaccactatgttgcttgtatgctggtagtt
tcttctagtgaacctgaccctgtggagcagttcctgaagctgtcccaagaacaacatcgg
attcagcacagtagcgaatactcgtatcccaagtggtttataccaaacacacttaaatat
tatgtgttactgcatgatgtaagcacaggagaagagcaaagagctgactccatttatgaa
gagatgaaacagagatatggaactcagggttgctatttgctgaaaataaattctcgggtg
tcgaacagaggagcagacgaacaaataccagatccttggagtcagtaccttcagaaaaac
actatccagaaccaggattcctatgaagattatacagtttcaaacaagagtactgatcac
ttgatatcagatggcatagacagtgaaattaaagacggcttgtcaaataactttaagact
cacccccttcaactggatcatcccagtggcagtttggatagcactgattacatgaaggct
tctacatcagttcaagactcaaagaagtcaaattctgggacacctcatggtgcttgctta
actctcacagatcacgatcgaattaggcagttcatacaggaattcacatttcggggactt
ctaccacacatagaaaaaacaattcgacagctgaatgatcagttaatatccaggaaaggc
ttgagccgatcactgttttttgctactaaaaaatggtttagtggcagcaaggttccagag
aaaagtataaatgagctcaagaatacttctggtttgctgtatccaccagaagcgccagaa
cttcaaatccggaagatggcagacttgtgctttttggtgcaacactatgaacttgcatat
agctgctaccatacagcaaagaaggacttcttaaatgatcaggcaatgctttatgcagct
ggagcactggaaatggcagcagtatcagcttttcttcagcctggagctcctaggccatat
cctgctcattatatggagacagcaattcagacttatcgagatatctgcaagaacatggtt
ctggctgaacgctgtgtactgcttagtgctgaaatcttaaaaaatcaaagcaaatattca
gaggcagctgctcttctgattcgtttgaccagtgaggattcagatcttcgtagtgcactc
ctgttggagcaggcagcccattgttttataaacatgaaaagtcccatggttcgaaagttt
gcatttcatatgatattggctggccacagatttagtaaagcagggcagaaaaaacatgcc
ttacgttgctactgtcaagccatgcaggtttacaaagggaagggctggtctctggcagaa
gaccacattaatttcaccatcggtcgtcagtcctttacgcttcgtcagctggacaatgct
gtttctgccttcaggcatattttgatcaatgacagtaaacaacctccagctcagcaagga
gcttttttaagagaatatctttatgtctataagaatgcaacccaggcgtcacctgatggt
cccttgccacagcttcctttaccatatattaacagctcagcaactcgtgttttctttggc
catgatcgacgaccagcagaaggtgaaaagcaggcagctacgcatgtaagcttggatcag
gagtatgactcagaatcatcacagcagtggaaggagctcgaggagcaagttgtgtctgtg
ataaataaaggaaccataccttcaaactttcaaccaacacagttctgtttaaatcgctac
tcagataactccaaatttccacttgctgtgatagaagaaccaataactgtagaagtgtcc
ttccgaaaccctctgaaagttccgcttcttttgactgacctttcattgctgtggaaattt
caacctaaaaacttcagtgtaaagtgtgatggagaaacaaaagagcagggtacgtgtgac
gaagatatggtaggaactgaagcaatagcagaatttttaattaatagcgaggagacaaaa
gtggcaagactaaagctctttccccatcaaacaggggagctacatattctgggagtcgtt
tataatcttggcagtgttcaaggtgctgtgtcattagatgggatagatccttctattgga
ttacagacaggaaagtttgtttccaatgggttatctgtacgaggaagacaagatttggaa
atccaagggcctcgacttaataacacaaaggaagaaaaaacatcgattaaatatggacct
gatcgacgtttagatcccattattacagaagaaatgcctttgttagaggtgttctttata
aattttcctacagggcttctctgtggagaaatcagaaaagcatatgtagaatttgtgaac
gtaagcaagtgtcctcttactgcactaaaggtcgtgtccaagcatccagaatttttcact
tttggtggaaatactgctgttttaacaccactaagtccttcagcatctgagaactgtagt
gcttacaagactgttgtgacagatcctacctctgtgcgaacagcactgctgtcttcagct
tcttctgcagactttggggttggcacgggaggttcacctgaagtaatacaggttccgctt
cctgatgctgttcttcttcctggggcttcagtgcagctgccaatgtggttacggggacca
gatgaagaaggtgttcatgaaattaatttcctgttttactatgaaggtattaaaaagcac
tcaaaaatgtgtcacagagtattaaggcacactgcagttatttgtaccagtcggtctctg
cacgttcgggctactgtctgcagaagtaatgcacttggggatgaagaaggcagaggggac
accatgttgctctttgtggatgtagaaaatatcaatactagtgagacgggtgttaaggaa
tttcatatagcgcaagtttcaagcaatagcaagcactggaaacttcaaaaatctgttaac
atctctggagacaaagacactaaactggctagcagagagagagcaaaattgtgttttaaa
gcagtgagatgcaaaaactcagaagaaaattacacatttgcagatattgtctttggaaat
gaacagataataagttcagccagtccttgtgcagacttttttttccaaagcttatcctct
gaatttaaaagaacacatgtgcaatctcatactcacacatctcaaagggcagtgaaacaa
tcgtttgatgaaacagtcagattggtacaaagatgcagtgaagttgatttgaacattgta
gtactgtggaaggcatatgttgtggaagacagcaagcagcttattttggagggtcagcat
catgttgcccttaacacagttgggaaggaggccttttcctttcctcagaagcagggtttt
aaaaaaatactcgggaattctgattgggaggacttggaacaggaactaccagaaacagtt
ctattaaagttttttcgaccagaaaacacaccggtacctgcaagaccaacaccagagcag
ctttctaatcttattaagacaagtcttcattatccagagtcttttagtcattcttttcat
caaaaaagcctctgtctggtacctgtcactctcctactttccaattgttcccaggctgtt
gtagatgtgatgattgatttgcggcataaaccaacaagctctgaagcactagaaatacat
ggatcttttacatggcttgggcaaacacagtacaagcttcaacttaaaggccaggaggtc
tatagcttgcagctcaaagcttgcttcgttcatacaggtgtctataaccttggaaccccc
agagtatttgccaagcttgtggaccaagttactttgtttgaaacaagtcagcagaactcc
atgcctgcactgattattatcaataatatctga
DBGET
integrated database retrieval system
