Lonchura striata domestica (Bengalese finch): 110471021
Help
Entry
110471021 CDS
T05897
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X5
KO
K14946
RNA binding protein fox-1
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110471021 (RBFOX1)
Spliceosome [BR:
lsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110471021 (RBFOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
110471021
NCBI-ProteinID:
XP_021386834
LinkDB
All DBs
Position
14:576184..1745191
Genome browser
AA seq
525 aa
AA seq
DB search
MSNSCGSPEDAGKQRGREGRIRREDVDDSQPEGKRLKLGDEAGTAGRDGEAAAEDAMMPC
SGREEPVPEGGGEGKSDYKSDVMTLVTSAKNNPQGPVLTSLDASKAEDTKAESSSGVETE
DRKSSKQQMSCEREQLRGNQEATAPPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPDY
TGQSTVPEHTLNMYPPAQTHSEQSAADTNAQTVSGTATQTDDAAQTDGQQQTQSSENTEN
KSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRA
REKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGRVLLCQ
ANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPI
PAYGGVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSDSYGRVYAADPYHHTLAPAATY
GVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcctgcggcagcccagaagacgcggggaagcagcgaggcagagaaggcagg
ataaggagggaggatgtggacgattcccagcctgagggaaagaggctgaagctgggggat
gaagcaggaaccgctggaagggacggagaagcagcagcagaagatgcaatgatgccttgc
tcaggcagagaagagcccgtgcccgaaggaggaggcgaaggcaaaagtgactataaatct
gatgttatgactctggttaccagtgccaagaacaatcctcaaggtccagttttgacatcg
ctggatgccagcaaagctgaggacactaaagcagagagcagttctggtgtagaaactgag
gacagaaaaagttcaaaacaacagatgagttgtgaaagagaacaactaaggggtaatcag
gaagctacagcacctcctgacacaatggcacagccttatgcctcagcccagttcgctcca
cctcagaacggtatccctgcagaatacacagccccacatccgcatccagctccagactac
acaggccaaagcactgttccagagcacacgttaaacatgtaccctcctgctcagacacac
tccgaacagagtgcagctgacacaaatgcacaaactgtctccggcacagccacacagaca
gatgatgcagcacagaccgatggccagcaacagacacaatcttctgaaaacacagaaaac
aaatcacagccaaaacggctccacgtctcaaatataccattcagattccgagatccagat
cttagacaaatgtttggtcaatttggtaaaatcttagatgttgaaattatttttaatgag
cgaggctcaaagggatttggtttcgtaactttcgaaaatagtgctgatgcggacagggcg
agggagaaattacacggcaccgtggtagagggccgtaaaatcgaggtaaataatgccaca
gcacgtgtaatgacaaataaaaagaccgtcaacccttacacgaatggctggaaattaaat
ccagttgttggtgcagtttatagtccagagttctatgcaggcagggtgctgctgtgccag
gcaaaccaggagggatctcccgtgtacagtgcccccagttcactagtatacacatccaca
atgccaggatttccctacccggctgcgaccgcagccgccgcgtacagaggtgcccaccta
cgaggccgaggtcgcacggtgtacaacacgttccgagcagcggctccccctcctcccatc
ccagcctacggcggtgttgtataccaggatggattttatggtgcagacatttatggtggt
tatgctgcctaccggtatgcccagcctgccactgccactgcagctgcctacagtgacagt
tacggacgagtttatgctgcagacccctaccaccacacacttgctccagcagccacctac
ggcgttggtgccgtgaatgcttttgcacccttgactgatgccaagactaggagccatgct
gatgatgtcggtctcgttctttcttcattacaggctagtatataccgagggggatacagc
cgttttgctccatactaa
DBGET
integrated database retrieval system
