Lonchura striata domestica (Bengalese finch): 110473102
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Entry
110473102 CDS
T05897
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110473102 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110473102 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110473102 (USP16)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110473102 (USP16)
Peptidases and inhibitors [BR:
lsr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110473102 (USP16)
Ubiquitin system [BR:
lsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110473102 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
110473102
NCBI-ProteinID:
XP_021391041
LinkDB
All DBs
Position
1:complement(110701360..110719779)
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AA seq
820 aa
AA seq
DB search
MGKKRTKGKTAQADESPDILKPVCNHIRKGLDQGHVRKALQNVEWHVCQDCKADSKTQEK
AEEEETDEGTSIWLCLKCGHRGCDRNSPDQHALKHFKTPRSDPHCLVLNLDSWSVWCYLC
DNEVPYKTSTLLGQTVDFVRKQVGIDSSHAEKQETKEVENKKVEKDSKNEQEKEVSLKEE
NSHSAANGEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMPGTTIKIESPELCT
EPQLIKLDQPGPLTLAMHQFVTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELL
RYLLDGMRAEEIQQISIGILKALSDSNKQNEEELKKKIKEYEKKKGIQSFVDRIFGGELT
STIMCEECRTVSLVHESFLDLSLPVLDVQKGKITKRENIKKNKEKESEDEEDKINDHYLK
QKYEPRGTSKHLQKKTKKQAKKKAKSQRHQEKLKGKMLHLTDLCTTEQPEIDVECNQESE
TEMSSETLDKKQEEESSHDCKDHCLTQKDLSIQGNSTEIQSRHENVGKTEQECEENESLV
DVSIEGLDSPMKFVNGLDNLSLKEEDDNEEEEELATDFSKLHLGASDTSDTSTLDGLQPV
PNKTCEVSTDDPETAFCTLANREELNPEEDSIHHCLYQFTRNETLTETNKLLCDVCTQRH
CGPKNNISEKKYVYTNAKKQMLISLAPPVLTLHLKRFQQAGFNLQKVNRHIKFPEVIDLA
PFCTAKCKNVAEGNTKVLYSLYGVVEHSGTMRSGHYTAYVKMRAMNNHLSDLVLRGQSQA
SETEPVKGQWFHISDTHVQPVSVSKVLSSQAYLLFYERLL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaacgcaccaaaggcaaaactgcacaggctgatgagtctccggatatactg
aaacctgtgtgcaaccatattcgtaaaggactggaccaagggcatgtgagaaaggcactg
cagaatgtggaatggcatgtttgtcaggactgcaaggcagacagtaagacacaagagaag
gctgaggaggaggagactgatgaaggcacttcgatatggttatgcctaaaatgtggccat
aggggctgtgacagaaattctccagaccagcatgctttaaagcattttaaaacaccaaga
tcagatccccactgtttggttctcaatttggacagctggagtgtgtggtgctacctatgt
gataatgaagttccatataaaacttcaacccttttgggccagactgtggattttgttaga
aaacaagttggtattgactcatcacatgcagaaaaacaagagactaaagaagttgaaaat
aaaaaagtggaaaaagacagcaaaaatgagcaagaaaaagaagtttcacttaaagaagaa
aattctcattcagctgctaatggagaagtcactgtgaaaggacttagtaacttgggaaat
acgtgtttctttaatgcagtgatgcagaatttatcccaaactccagtcctgagggagctg
cttaaagaagctaaaatgcctggcacaacaattaaaattgagtcacctgagctatgcacg
gaacctcagctaataaaactagatcagcctggtcctttaacactagccatgcatcagttt
gtgacagaaatgcaagagacaaaaaaaggggtagtgactcctaaggaactttttgctcag
gtttgtaaaaaagcaatacgattcaaaggttatcagcagcaagacagccatgaactgctt
cgttacttacttgatggaatgagagcagaagaaatccagcaaataagtattggaatacta
aaggcgctgagtgattctaacaaacaaaatgaagaagaacttaaaaagaaaattaaagaa
tacgaaaagaaaaagggaatacaaagttttgtagatcgaatctttggtggagaattaacc
agcacaattatgtgtgaggaatgcagaactgtatccttggtccatgagtctttccttgat
ttgtcacttccagtactagatgttcagaaagggaaaattacaaagagagaaaacattaag
aaaaacaaagaaaaggaatctgaagatgaagaggataaaatcaatgatcattaccttaag
cagaaatatgagccccgtggtacaagtaagcaccttcagaaaaaaacgaagaaacaggcc
aaaaaaaaagcaaagagccaacgccatcaggaaaaacttaaaggaaagatgcttcacttg
acagatctctgcacaactgaacagccagagatagatgtcgagtgcaaccaagaatcagag
actgaaatgagctctgaaactcttgataagaagcaagaagaggaatcatcacatgattgc
aaagatcactgcttaactcagaaagacttgagtatacagggaaatagtacagaaattcag
agcaggcatgaaaatgtaggaaagacagaacaagagtgtgaggaaaacgagtctctcgtg
gatgtctctatagaaggcttagattctcctatgaagtttgtcaatggccttgacaacctg
tctttgaaagaggaggatgacaatgaagaggaggaagagcttgctacagacttttcaaaa
ctccacttaggtgccagtgacacaagtgacacaagtaccttggatggccttcagcctgtt
cctaacaagacgtgtgaagtatctacggatgaccctgaaacagcattttgtactctggca
aacagggaagagctgaaccctgaggaagattcaatccatcattgtttgtatcaatttacc
cgtaatgaaacacttaccgagaccaataaactgctgtgtgatgtgtgtacacaaaggcat
tgtggaccaaagaacaacataagtgaaaagaagtatgtttatactaatgccaaaaagcag
atgctcatctctctagctcctccagttttaacccttcacttaaagaggtttcagcaggct
ggatttaatctacagaaggttaacaggcatatcaagttcccagaagtgatagacttggct
cctttctgtacagctaaatgtaaaaatgtggctgaagggaacacaaaggtcttgtactct
ctctatggagttgttgaacacagcggaacaatgaggtctgggcactacactgcctatgtt
aaaatgagagctatgaacaaccacctctctgatcttgtccttcgaggacaatctcaagct
tcagaaactgagccagtcaaaggtcagtggttccacatcagcgatacccatgtacaacct
gtctctgtgtccaaagtgctgagctcccaagcctatcttctcttctatgagaggctgttg
taa
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