Lonchura striata domestica (Bengalese finch): 110473244
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Entry
110473244 CDS
T05897
Symbol
WDR78
Name
(RefSeq) WD repeat-containing protein 78
KO
K24723
dynein axonemal intermediate chain 4
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110473244 (WDR78)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsr03037
]
110473244 (WDR78)
04812 Cytoskeleton proteins [BR:
lsr04812
]
110473244 (WDR78)
Cilium and associated proteins [BR:
lsr03037
]
Motile cilia and associated proteins
Dynein arm
110473244 (WDR78)
Cytoskeleton proteins [BR:
lsr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
110473244 (WDR78)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Frtz
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
110473244
NCBI-ProteinID:
XP_031361434
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All DBs
Position
8:complement(29745103..29759529)
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AA seq
685 aa
AA seq
DB search
MILIISIFLQVFDDEGKNVTPRPLFQPDPNAAVPRTQGSSTSTTKPGLDETEPQQDAALM
LSAVQEEGQAALREAELEQRVEMVLSESGTLWMLHLPTALLSTEAEEAPRVLERNKIYAE
ICEAKIGSEYFEEKIVQTISGAAKSKEVQCETITVAEKGVMVTPWDLESSQPASGAEPAE
TEEPESPKAEKSRKSPTAEEHAQAVAVPSATESAAAARSHEEQECQPGAILTSAKLQQDL
VVMERILMENIFQPKLAVYRQIPVLIEPVVTSDTEVEEDEDEEDEDEEEEEEKQEEGAEP
AQSPAEGAGPRLEQLWSYQCDLTWAHSVSSMAWNKVNPDLLAVGYREFVSRDQKKGLACC
WSLKNPMWPERVFRCEHGVTAVDFSLASPNLLAVGTADGRVAIYDVRSRGDAALLDSSAS
LNKHKGPVWQLRWVEQDRGAAAGDKGERLMCISGDGRVTQWFIQQRLDCSDVMKIKRTES
GKKKLPGERERKSEGPISQQAAGLCFDFHPEDSDVFLAGTEEGHIYCCSCSGKEQILGTY
RGHKGPVYKVAWNPSSTDVFLSCSADWSILLWHKDSHRPLLTFTSVTAFVHDIKWAPQSA
LVFAAVNEERVEIWDLSVSIFQPVLSCAASPEGKLSCLLFARNAECLLLGDSRGQVGVWQ
LHSLAVPNAQQVGSLCDIVAPAGAV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgattatttcaatttttctccaggtttttgatgatgaagggaagaatgtgaca
ccccgtcccctcttccagccagacccaaacgctgctgtacccaggacacagggaagcagc
acatcaacaaccaagcctggcttagatgagacagaacctcaacaagacgcagctttgatg
ttgtctgccgtgcaggaggaggggcaggcagccctgagggaggcagagctggagcagagg
gtggagatggtcctgtcggagtcgggaacgctctggatgctgcacctgccaacggccctg
ctgtccaccgaggcggaggaggctccgagggtcctggagaggaataagatttatgcagag
atttgtgaggctaaaatcggcagtgagtactttgaagaaaaaatagtgcaaaccatctct
ggggctgccaaaagcaaggaagtgcagtgtgagaccatcactgtggcagagaaaggggtg
atggtgactccgtgggatttggagagttcacagcctgcctcaggagcagaacctgcagag
acagaagaacccgaaagcccaaaagcagagaaaagcagaaagtctcccacagctgaagag
cacgctcaggctgtggctgtcccttctgccacagagagtgctgctgctgccaggagccac
gaggagcaggagtgccagccaggagcaatcctaacctcagcaaagctgcagcaggattta
gttgtcatggagaggattctcatggagaacattttccaacccaaactcgcagtttatcgg
cagattcctgtcctcatagaacctgttgttacctcggacactgaggtggaagaagatgaa
gatgaggaggatgaggatgaggaggaggaggaggagaagcaggaggaaggagcagagcca
gctcagagcccagcagagggggcaggccccaggctggagcagctctggtcctaccagtgt
gatttaacctgggctcacagcgtgagcagcatggcttggaacaaggtgaaccctgatctc
ttggcagttggttacagggagtttgtttctcgggatcagaagaaaggcctggcttgctgt
tggtcactgaagaaccccatgtggccagagcgcgttttccgctgcgagcacggcgtcacc
gctgtggatttctccctggccagcccaaacctgctggcagtgggcacggccgatgggcgc
gtggccatctacgacgtgcggagccgcggggacgccgcgctgctggacagcagtgcatcc
ctaaacaaacacaaaggtcctgtgtggcagctgaggtgggtggaacaggacagaggtgca
gcagcaggtgacaaaggagagagactgatgtgcatctcaggagatgggagagtgacccag
tggttcattcagcagaggctggactgctctgatgtgatgaaaatcaagcgaacggaaagt
gggaagaaaaaattaccaggtgagagagaaaggaagagtgaaggtcccatatcacaacag
gcagctggcctgtgcttcgacttccacccagaggattctgatgtttttcttgctgggaca
gaagagggccacatctactgctgctcttgctcaggcaaggagcagattctggggacatac
agaggccataagggtcctgtgtacaaagttgcctggaatccctcgagcacagacgtgttc
ctgagctgctctgcagactggagcatccttttgtggcacaaggattcccacaggcccctg
ctaaccttcacttctgtcacagcttttgttcacgacatcaagtgggctccacaatctgcc
ctggtcttcgcagcagtgaatgaggagagggtggagatttgggatctgagtgtcagcatc
ttccagcccgtgctctcctgtgctgccagccctgaagggaagctcagctgcctcctgttt
gccaggaacgccgagtgcctgctgctgggggacagccgtggccaggtgggggtgtggcag
ctgcacagcctggctgtccccaacgcccagcaggttggttccttgtgtgacattgttgct
cctgctggtgctgtttaa
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