Lonchura striata domestica (Bengalese finch): 110473796
Help
Entry
110473796 CDS
T05897
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110473796 (CHD6)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110473796 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
110473796
NCBI-ProteinID:
XP_021392305
LinkDB
All DBs
Position
20:complement(669496..767291)
Genome browser
AA seq
2747 aa
AA seq
DB search
MRLQGHEITFIPDLMIMKIQKKEKQPPSLKTLSLSPMSSAWECKTQDTFASSEEQDKVPH
QVTVTATNTGGQCQCPKEEPNGAAQKRTSAQNGMQDSGGTGVKKKRKKKDLGEQEGGDKA
AVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKESKDKKSGSEP
APRSRSKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRS
GRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKIL
ASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQ
MKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEED
VDPGKIKEFEALQIPPESKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWL
LFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWT
EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQW
RCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSE
TAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYR
AILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHCPEAPD
FQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGR
VRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR
CHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEV
EDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNR
TDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELD
SDSDERPTRSRRLNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEM
ICRALLVYCVKHYKGDDKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKN
QMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKA
FEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEK
VGMPDEKLLSAEQGVSDGAQDAAERGIMEKEENSGEKLEGLSKREDIVAAGVGETSEKRD
EPAAAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPGNHGYWLQDE
MFRRASEMDLMNKEMQKRWTRREQADFYRTVSSFGIIYDQEKKIFDWAQFRAISRLEKKT
DESLEKYFYSFVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQ
VLKCPQLHERLKLCQPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDA
YRNYAQHKRTGLPGPETLCCLYQSNSKLYSSPVYSQMDQSCETLENEAESHIKLETVDST
MSQAGGSPLDAHCETFMSEVRDIISSNYDESSLPDSLVCMMYDEKACPSEQSSLTRDSPS
CTDVGSSVAKLSEGKLEGDEDPSSCDADAMREVPFLEGLQVVSDQMDNQNEEAEPSPSTP
ESNPSQSAPSKLSKGLEQKGALASPATGLPEHGTMERVLSVGLYSPSLHNYELKVPPEQR
FISLLQEKGLEAKSGPSQSHSEEDEEEEEDDDNSEAAADAEEGLNGSGTRADFDPEAHEL
GGEEQSSGLPTPEDTCPEDVNGERESLGLGEPGAEVREDCGLNEESTQQHSPGQAQSQPF
SLPAPLPQGGPRGAETPCVRGEPLGQGAEGQTGCMETLHPEPQGIKQEECENRDDGEKAS
SNQSQDGPEKYLEEENKNSASVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVII
NRIDNICHAILKGKWPSSSQQFEAQSLLTAPAMASNIGSRSSFTESEAPDPTFSNGVLMS
RVQKEGFLSPTFAKDERKHRRPYEFEMERDAKQRSLEQLAAARVHPPIVLNGWREAAVDL
SRGSDGSPGNSSPFPLNTNMPKLGTVNALQSSLGMDLSGILQAGLIHPVTGQIVNGSLRR
DDAAMRRRRGRRKNVEGMDLIFLKERPLPNRLQDVQEDQPQPPQSSPLPDGPVAATSTPQ
PVPAAGSQEKAVPNKSLLDWLRQQSDYTLDVSSFGTNFSDKPKQRRQRCKDPSKLDISSL
TGEERVPVVHKGTGRRLGGATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPENKFN
RILTEPVLRDTGPRRRGRRPRNELLKGPGVVADSSSGMGPLFMNGLIAGMDLVGLQNMRN
MQGIPLTGLVGFPAGFAAVPSGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNSPMTTTC
TATAPTSLTSTTKGGTASTEKANEEKQGSQDGKREPLTEDKPGPSSFSNQTESAITTSSP
VAFNPFLIPGMSPGLIYPSMFLSPGIGMALPGIQQTRHSEAANLESQKRKRKKAKGELAN
PEPETVSLPEKEAANSQNCVQQSLPVVAEKEQDGPAEEERQVAHDTD
NT seq
8244 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcagggccatgaaataacattcatcccagatttgatgataatgaaaatacag
aaaaaagaaaagcagccgccaagcttaaaaacactgagcctctccccaatgtcgtctgcc
tgggagtgcaagacgcaggatacctttgccagcagtgaggaacaggacaaggtgccccac
caggtgacagtgacagccacaaacacaggtggccagtgccagtgcccaaaggaggagccc
aatggggctgcccagaagcggacaagtgcccagaacgggatgcaggacagtgggggcaca
ggggtgaagaagaaacggaagaaaaaggatctgggagagcaggaagggggagataaagca
gctgtggaggtgaaaccaaagaggaggagagagcctaaagaaccaaaagagcctaaaaag
gtgaaggagtccaagaagccgaaggagcctaagcagagggaggtggctaagaagccccgg
aaacctcgggaacccaaagctccaaaggagtctaaagacaagaagagtggctctgagcca
gcccctagatcaagatccaagaagagcagcaaagacacccctgtggagaagaagaagaaa
gggaagaggaaaaatgagataccagtgaacagtttggatttggatcaggatctcctgagc
ccatccgtacagagcccagaggagtctgcagagtcagctgacagccagaaacgacgctca
ggacggcaggtgaagaggaggaagtacaacgaggacctggatttcaaggttgtggatgat
gacggcgagacaattgccgtgctgggagctgggcgaacctccgcgctctcagcctctact
ctggcgtggcaggcagaggagcctcctgaggatgatgccaatataattgagaagatcctt
gcctccaggatggtgcagaaggaggctcatcctggaggcctggcatttgagacagaggag
ttctacgtcaagtacaggaacttctcttacctccactgtaaatgggcaacgctggaggag
ctggagaaggaccccaggatctcacagaagataaagcgcttccggaacaagcaggctcag
atgaaacatatttttacagagcctgatgaagatttgttcaaccctgactacgtggaggta
gatagaattctggaggtggctcacacaaaggaccctgacactggggaggaggtgactcac
tacttggtgaagtggtgctcactgccctatgaggagagcacttgggagctggaggaggat
gttgacccagggaagattaaagagtttgaagctctccaaattcctccagaaagcaagcac
atggtaacgtaccctgaggagcgcccagcgtctgagtcctggcagaagctggagaagtcc
cgggagtacaagaacagcaaccagctgcgggagtatcagctggagggaatgaactggctg
ctctttaactggtataacaggaagaactgcatcctggctgacgagatggggttggggaag
acaatccagtcaatcactttcctctcagagatattcctgatgggcatccatggccccttc
ctcatcatcgcacctctctccaccatcacaaactgggagagggagttccgcacctggaca
gagatgaacgccatcgtgtaccacggcagccagatcagccggcagatgatccagcagtac
gagatggtgtacagggacacacagggtaaccctctccctgggatcttcaagttccaggtg
gttatcaccacctttgagatgatccttgctgactgtccagagctgaaaaagatccagtgg
cgctgtgtggtcattgatgaggcacatcgtctaaagaacaggaactgcaaactcctggag
gggctgaagctcatggccctggagcataaggtgctgctaacaggtacccccctgcagaac
tcggtagaggagctcttcagcctcctaaattttctggagccacagcagttcccctcagag
acagcctttctggaagagtttggagacctgaagacagaggagcaggtgaagaagctgcag
tccatcctgaagcccatgatgctgcgacggctgaaggatgatgtagagaagaatctggca
cccaagcaggagaccatcattgaggtggagctgaccaatatccagaagaaatactaccgg
gccatcctggagaagaatttctccttcctctccaagggtgccaaccagcacaatatgccc
aaccttatcaataccatgatggagctgcgcaagtgctgcaatcacccatacctcatcaat
ggggcagaggagaagatcctggaagacttccgtaaaacacactgcccagaggcaccagat
ttccagctgcaggcaatgatccaggcagctgggaagctggtgcttattgacaagctgctt
cctaagctgattgctggtgggcacaaggtgctcatcttctcacagatggtgcgctgcctt
gacatcctggaggactatctcatccagagacggtacacctatgagcgcatcgacgggcgg
gtgcgcggcaacctgcgccaggctgccatcgaccgcttctgcaaacccgactcggatcgc
tttgtctttctcctgtgcacgcgggccggcgggctgggcatcaacctgaccgctgctgac
acctgtatcatcttcgactctgactggaacccacagaatgaccttcaggctcaagctcgc
tgccaccgtattgggcaaagcaaggccgtgaaggtctatcgcctcatcaccaggaactcc
tatgagcgggagatgtttgacaaggccagcctgaagctgggcctggataaagctgtgctg
caggacatcaaccgcaagggcagcaccaatggggttcagcagctctccaagatggaggtg
gaggacctgctgcggaagggtgcctatggcgcactcatggatgaggaggatgaggggtca
aagttctgtgaggaagacattgatcagatcctccagcgcaggacacagaccatcacaatc
cagtctgaaggaaagggctccacatttgcaaaggccagctttgtagcatcaggaaacaga
acggacatttccttagatgaccccaacttctggcaaaagtgggccaagatagcagagctt
gatacagatgccaagaatgaaaaggagagcctggtcattgacagaccccgggtgcggaag
caaaccaaacattacaactccttcgaagaggacgagctgatggagttctctgagctggac
agtgactcggatgagcgacccacacgctcgcggcgcttgaacgagaagacgcggcgatac
ctgcgggctgagtgcttccgtgtggagaagaacctgctcatatttggctggggacgctgg
aaagatatcctgacccatgggcggttcaagtggcacctgaatgagaaggacatggagatg
atttgtcgggccttgctggtgtattgcgtcaaacactacaaaggggatgacaagatcaag
agttttatctgggatctcatcacgccgacaaaggatggccagaatcaggctctgcagaat
cactcaggtagcttgtcagcaccggtgcccagaggcaggaaggggaagaagacaaagaac
cagatgctgcttcctgagataaagaacgcagactggcttgccacctgcaaccccgaggtg
gtgctccatgatgacagctacaagaagcacctcaaacaacactgcaataaggttctgctg
cgggtgcgaatgctctactacctgaaggctgaagtactgggagaggctgcggataaagcc
tttgagggcacccctgccagggagctggatgtgctgctgccagacattgattatgtggag
atcccagtggactggtggaatgccgaagccgataaatccctgctcatcggcgtcttcaag
cacggttatgagcggtacaacgccatgcgggcagacccagcgctgtgtttcctggagaag
gtgggcatgccagatgagaagctgctctctgccgagcagggcgtcagcgatggggcacag
gatgctgctgaaaggggcatcatggagaaagaagagaacagtggagaaaagctggagggg
ctgtcaaaacgggaggacatcgtggctgctggggtgggtgaaaccagtgagaagcgggac
gagccagcggcagcccaggatggctctgactcagacagatcctgctggcctgtctcctct
gctctcacggccagactgcggcgccttgtcactgtctaccagcgctgcaaccgcaaggag
ctgcctccccgcgccgagatgctggtgcccggtaaccatggctactggctgcaggatgag
atgttcaggagagcctctgagatggacttgatgaacaaagaaatgcagaaaaggtggacc
aggagggagcaggcagacttctaccgcactgtctcctcctttgggattatctacgaccaa
gagaaaaaaatctttgactgggcccagttccgagccatctcgcgactggagaagaagaca
gatgagagcctggagaagtatttctacagctttgtggccatgtgcaagaatgtctgtggt
ctccctttatggaaagaggatggtcctccagaccctgacatctatgtggagcccatcacg
gaggagcgtgctgccaggaccctgtaccgcatcgagctgctgcggaaggtgcgcgagcaa
gtgctcaagtgcccccagctccacgagcgcctcaagctgtgccagcccagcctctacctg
cccgtgtggtgggagtgtggcaaacacgaccgggacctgctgatcggcactgccaagcac
ggcctgaaccgcactgactactacatcatgaatgacccccagctgtcttttttagacgca
tacagaaactatgcccagcataaaagaacagggctcccaggcccagaaaccctttgctgt
ctttaccagtctaactccaaactctacagttcccctgtgtacagccagatggaccagtcc
tgtgaaaccctggagaacgaagctgagagtcatatcaagctagaaactgtggacagcacc
atgtcccaggctggtggcagcccgctggacgcacactgtgaaacattcatgtctgaagtc
cgggacatcatttccagcaactacgacgagagctcactgccagactcgctggtgtgcatg
atgtacgatgagaaggcctgtcccagcgagcagagctccctcaccagggacagcccaagc
tgcacagatgtcggaagcagcgtcgccaaactctctgagggcaagctggagggggatgag
gatccatccagctgcgatgcagatgccatgagagaggttcccttcctagaaggtttgcag
gtggtctctgaccaaatggacaatcagaatgaggaagctgagccttcaccttctacccct
gagagcaatccctcacagagtgccccatccaaactcagcaaaggcttggaacagaaagga
gcacttgccagcccagcaacagggctgcctgagcatggcaccatggaaagggtcctaagt
gtcgggctctacagtcccagtctccataactatgaactaaaagttcctcctgagcagagg
ttcatcagtctgctgcaggagaaaggattagaggcaaagtcggggccaagtcagagccac
agtgaggaagatgaggaggaagaagaggatgatgataactctgaggcagcagcagatgcc
gaggaaggcttgaatggttccgggaccagggctgattttgaccccgaggctcatgaactg
gggggtgaggagcagagctctggtctccccacacctgaggacacttgcccagaagatgtg
aatggcgagagagagtccctgggtctgggggagcccggggcagaggtcagggaggactgt
ggcttgaatgaggagagcacccagcagcattcaccgggccaggctcagagccagcccttc
agcctgcctgcacctctgcctcagggggggcctcgtggggcagagactccctgtgtcagg
ggggagcccttggggcaaggtgctgaggggcagacaggctgcatggagaccctgcaccct
gagcctcagggcataaagcaagaagagtgtgagaacagagatgatggggagaaagccagc
agcaaccagagccaagatggtccagagaagtacttggaggaagagaacaagaattctgct
tctgtcctgcctggggagattgatgatcttcaggatgcccgggcaccaaccattgcccag
ctgctgcaggagaagacactttattccttctctgagtggcctaaggaccgtgtgatcatc
aaccgcattgacaatatctgccatgccatcctgaagggcaagtggccttcctccagccag
cagtttgaggcacagagcctgctaacagccccagccatggccagcaacatcggcagcagg
agcagctttaccgaatcagaagcccctgatcccaccttcagtaatggggtcttaatgtca
cgggtacaaaaggaaggtttcctgagccctacctttgcaaaagatgagcggaagcacagg
agaccctatgaatttgagatggagagagatgccaaacagaggagcctggagcagctggca
gcagcccgtgtccatccgcccattgtgctgaacggctggcgcgaggcagcggtggacttg
tccagaggctctgatgggtccccagggaactcctctcctttccccctgaacacaaacatg
cccaaactggggaccgtgaatgccctccagagctccctgggcatggacttgtctggcatc
ctacaggcaggattaatccatcctgtcactggacagattgtaaatggcagcctccgaaga
gatgatgctgccatgaggaggagacggggcaggaggaaaaatgttgaagggatggacctc
atcttcttgaaggagaggcctcttccaaacaggctgcaggatgttcaggaagaccagcca
cagccccctcagagcagtcccctccctgatgggccggttgcagctacctcaactccacag
ccagtcccagctgcaggcagccaagagaaggctgtcccgaataagagtctccttgactgg
ctccggcagcagtctgactacacactcgatgtctccagctttggcacaaatttttcagac
aagcccaagcagaggaggcagcgctgcaaggaccccagcaaactggacattagctctctg
acgggagaggagcgagtgccggtggtacataagggtaccggacggcggttagggggagcc
acggcaccagcattgaaggaattgccaaggtggcttgatgcaaacttggagtatgctgtt
gcagctgactgggctgacattgttaagctttcaggctacttacctgaaaacaaattcaat
cgcatcctcaccgagcctgtgctccgggacactgggccgcgccggagagggaggaggccc
cggaatgaactccttaaaggccctggtgttgtagcagattcttcttctggaatgggacca
ctgttcatgaatggactaattgctgggatggatctagtgggacttcagaacatgagaaat
atgcaagggatccctctgactgggctggttgggtttcctgctggctttgcagcagtgccc
tctggtgaggatgtgaagagcaccctgagcatgttgcccatgatgctcccgggcatggcg
actgtaccccagatgttcggtgtgggaggactcctcaactccccgatgaccacaacttgc
actgcgactgctccgacttcgttaacaagcacaacgaaaggtggcacagccagcaccgaa
aaagccaatgaggagaaacagggcagccaggatgggaaaagggagcctctcactgaagac
aagcctggtcctagttcattttctaatcagacagaatctgcaataactaccagtagtcct
gtagcttttaacccatttcttatcccagggatgtctcctggactgatctatccctccatg
ttcctttcccctggcattggcatggcgctgcctggcatccagcaaaccaggcactcggag
gcggcgaacctggagagccagaagcggaagaggaagaaagcgaaaggggaattggcaaat
ccagagccagaaactgtctcactgccagaaaaagaagctgcaaacagtcaaaactgtgtg
cagcagagcctgccagtggtggcagagaaggagcaggacggaccagcagaggaggagcgc
caagtagctcatgataccgattag
DBGET
integrated database retrieval system
