Lonchura striata domestica (Bengalese finch): 110475905
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Entry
110475905 CDS
T05897
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C
KO
K14316
nuclear pore complex protein Nup121
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110475905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110475905
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110475905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
110475905
NCBI-ProteinID:
XP_021396071
LinkDB
All DBs
Position
19:2478389..2488971
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AA seq
1131 aa
AA seq
DB search
MAGAGPGGGRDGAVRAALAVAAALALALACLLLRGALLGAAALGAAGAWCAMRPGPPAPR
PPGKAATNGGPAARAAPRRPQPGVPRCRPQAPRRRYPLPEARPAVPLCLPAARWEGGSPR
SAPWARRAGPLRSPVTVKIAPPAVGIARSPALEQLVSPLALPATSSPDPCAKETVLNAIR
ESRKRAVEEEEDQTFGNDQENKRRRHDSSGSGQSAFEPLIANGAPASLIPKPGSLKRGLI
SHCPDDCSNKRSRTSSMSSLNNTYAGGIPSSIRNAIASSYSSSRGLTRLWKRRGVSVSPL
SSPASSRPQTPEWPLKKAREEESHHSNTSTPVKSDKELQTEKVVESPVWKKQNSLSPPSA
SGSSGKRKRKIPLLSSFRGDQLLLPPPPQLGYSITSEDLDAEKKAVLQWFNSVLEDKADA
VSSTTAEMMPVSKPPVFVVTSPGPLPASAAPAHASSSLLDSLKKMQSSQAVSTMPDSSGT
AAASQPPLSAAQPPAPVVSLESSSLPAISADTKPVSLLSTPAPSAPPALVVQAPSSLASP
VFTELGQTPSKPPSFPKPSILFEMLNTPPASQPAVTAATAVLTTATAMPTMASATPTAST
AVPIPPTATPTTTPIFKPIFGAVPKSENAAVCTAVTSTTATVPVSSGPASASSTSSIFKP
IFASITAASSPAKVSPFTFKPAAQPTSEPTTASTSALAGITGLPNIIFTTAATAATTQSS
STDATIKPVFSFGPNPPVSARPAASVTVTAATSTSTTQPFLFGGLSSSAPSTETSFATSG
LVFQFGKPPPATVTATTSVPGGPPFGQVPSNSTTVGFSIFGSTTLTTSAAATTAQAPLTF
GSSVSAFGSFSASAKPPPPYPSTGSQLTFSTGAAESQVPTSKPASGSISFTPSFSFGAPP
AQSVAQSAFGSGAQPAFGTTSAQGSFGTSSTQAAFGTTTSVFSFGTATSTTSSFGGTTQT
TSSSTSATVFGTTPSPFTFGASTQPGPSTSAFGMGTPGLSSGSPAVAFSFGAGQSGPAPA
AAPFGSSLPQSALGVQGQSTPFAFTMSSTPNSKPAFGGSPVPTFGQGTPVPGAVGSGSST
LSFRTPSTPASSFGGVSTSFGSSTPAFSIGAGSKTGTRQRLQARRQHTRKK
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcggggccgggcggggggcgggatggggccgtgagggctgcgctggccgtg
gctgccgcgctggcgctcgccttggcctgtctgctgctgcggggcgcgctgctgggcgcg
gcggcgctgggcgcagcgggcgcctggtgcgccatgcggcccggcccgcccgcgccgcgc
ccgcccggcaaagccgccaccaatgggggcccggccgcgagggccgcgccgcgtcgcccc
cagcccggggtcccgcgctgccggccgcaggccccgcgccgtcggtacccgctgccggag
gcccggccggccgtgccgctgtgcttgcccgccgcccgctgggagggcggctccccccgc
agcgcgccctgggcccgccgggccgggccgctccgcagccccgtcactgtgaaaatcgcc
ccgccggccgtcggcatcgcccgctccccggccctggaacagttggtctcgcctctggcc
ttgccagccacaagcagccctgacccgtgtgcaaaggagactgtgctgaatgccatcagg
gagagcaggaagagggctgtggaggaggaggaggaccagacttttgggaatgatcaggag
aacaaaagaaggcgccacgacagcagtggaagtgggcagtcagcatttgagccattaata
gccaatggtgcccctgcttctctcatacccaagccaggctctctgaagaggggcctcatc
tcacactgcccagatgactgctccaacaagaggtctcgcacctcctccatgagctccctc
aacaacacctatgctggtgggatccccagctccatccgcaatgccattgccagctcctac
agctccagccggggcctcacacggctgtggaagagaagaggtgtgagcgtgtcccctctg
tccagcccagcgtcctcccgcccccagacaccagagtggcctctcaagaaagccagggaa
gaggagtcacatcattccaacacttccaccccagtgaaatcagacaaggagctgcagaca
gagaaagttgtggagtcaccagtgtggaagaagcagaattccctgagcccaccttctgct
tcgggaagcagtgggaagcgcaagcggaagatcccgttgctgtcatcattccgtggggac
cagctgttgctgcccccgccacctcaacttggctactccatcacctcagaggacctggac
gcagagaagaaagcagtgctgcagtggttcaacagtgtcttggaggataaggctgatgca
gtctccagcaccactgcagagatgatgcctgtgtccaaaccgccggtgtttgttgtgacc
tcccctgggcctctgcctgcctccgcagctcctgctcatgccagttcctcacttctggac
agtttaaagaagatgcagagcagccaggctgtatccacaatgccagactccagtggaact
gcagcagcatcccagcctcctctgtcagctgcacagccacctgctcctgttgtgtcattg
gagtccagctctctgcctgccatctctgctgacaccaagcctgtgtctctattgagcaca
cctgcccccagcgctccccctgcgctggtggtgcaagcccccagcagcctggcctctcct
gtgttcactgagctgggccagacccccagcaagcctccctccttcccaaagccaagcatt
ctgtttgagatgctgaacaccccaccagccagccagccagcagtgactgcagccactgct
gtgctcaccacggccactgcaatgcctaccatggcctctgccacacccactgcatccact
gctgtgcccatcccgcccactgccacccccaccacaacccccatcttcaagcccatcttt
ggtgctgtgccaaagagtgagaacgcagcagtttgcacggctgtcacttccaccacagcc
actgtgcctgtaagctcaggccctgcctcagcatcctccacatcctctatattcaagccc
atctttgccagcattactgcagcttcatctccagccaaagtctctcctttcaccttcaaa
cctgcggcacagccaacctcagaaccaacaactgcctccacatctgctctggcaggaatc
acaggtcttcccaacatcatcttcaccactgcagctacagctgctaccacccagagttcc
tccacagatgccaccattaaacctgtcttcagctttggaccgaacccgcctgtttccgct
cgccctgccgccagcgtgactgtcactgctgccacctccaccagcacaacacagcccttc
ttgtttgggggcctctccagctctgctcccagcacagaaaccagctttgccacctcaggg
cttgtgttccagtttgggaagccacctccagccacagtcactgccaccaccagtgtccca
ggaggccctccctttggccaggtaccttcaaactcaaccaccgtgggctttagcatattt
gggagcactacactgaccacctctgccgcagccaccacagctcaagcgccgctgacattt
ggctcctccgtttcagcttttggcagcttttcagccagcgcaaagccaccaccaccgtac
cccagcactgggagccagctcaccttcagcactggggctgctgagagccaggtgcccacc
agcaaacctgcttctggctccatcagcttcaccccctcattcagtttcggagccccccca
gcacagtcagtagctcagtcagcatttggcagtggtgcccagccagcctttggcacaacc
agtgcccagggctcctttggcaccagcagcacccaggcagcatttgggaccaccacttca
gtgttctcttttggaacagccacctccaccacatccagctttggtggcactacccagacc
acaagcagcagcaccagtgccactgtctttggtaccaccccatctccattcacttttggg
gccagtacccagccgggcccctccaccagcgcctttgggatgggtacaccgggcctcagc
agtgggtccccagctgtggccttcagctttggggctgggcagagcgggccagccccggca
gcagcaccctttggctcatctctgccacagagtgcactgggagtgcagggccagagcacg
ccctttgccttcaccatgagcagcactcccaacagcaagcctgcatttggaggatctcca
gtgcccacctttgggcagggcacacctgtccctggagccgtgggcagtgggagcagcacc
ctttccttcaggacacctagcactcctgcctcaagctttggaggagtcagcacttccttt
ggttcatccactcccgccttctccatcggggcaggatccaagacgggcactcgccaacgg
ctgcaggcacggaggcagcacacccgcaaaaagtaa
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