Lonchura striata domestica (Bengalese finch): 110476204
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Entry
110476204 CDS
T05897
Name
(RefSeq) macrophage mannose receptor 1-like isoform X1
KO
K06560
mannose receptor, C type
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110476204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110476204
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lsr04054
]
110476204
04090 CD molecules [BR:
lsr04090
]
110476204
04091 Lectins [BR:
lsr04091
]
110476204
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Phagocytosis
C-lectin receptors
110476204
Pattern recognition receptors [BR:
lsr04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
110476204
CD molecules [BR:
lsr04090
]
Proteins
110476204
Lectins [BR:
lsr04091
]
C-Type lectins
Group 6: Mannose receptor family
110476204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
Xlink
UL45
Ricin_B_lectin
Chordopox_A33R
DUF6669
Motif
Other DBs
NCBI-GeneID:
110476204
NCBI-ProteinID:
XP_021396650
LinkDB
All DBs
Position
2:complement(20622105..20672957)
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AA seq
1469 aa
AA seq
DB search
MGAAWINTMNVLSLFTLTHALNLQETLDTSTFLIYNEDHKRCVLALSSNSVTTAPCVQEN
ESQKFRWVSDHQLMSIAFKLCLGVPSKKDWVPITLYPCDKASELQRWECRNETLFAIQGE
DLFFNYGNKQERNIMLYKGSGLWSRWKVYGTTDDLCSRGYEDTYTVKGNDNGAPCVFPFK
FGGKWYADCTDAGRSDGWFWCGTTSDYDVDRKYGFCPMKFTNNDLWNTDPLTNVQYQINS
ETALKWHQARKSCQQQKAELLSITELHEQTYLTGLTRTLSSALWFGLNSLNFNSGWQWAG
GAPFRYLNWVPGHPSPEPGKICGALNPGKGAKWENWECDKKLGYICKRGNATLESFIVPK
ETNVPIRCPDQWMSYAGHCYIIHRDPKIWKDALTSCRKEDGDLASIHNVEEYSFVISQLG
YQPSDELWIGLNDLKVQMYFEWSDGTPVTYTKWLRGEPTHANNRQEDCVVMKGKDGFWAD
HSCEKKIGYICKRKPMSDAPTEEETIDMGCQRGWKRHGFYCYFIGNTFLTFPQANQTCGS
HQAFLATVEDRYEQAYLTSLVGLKRERYFWIGLSDVEEKGTFKWCNGESVLFTHWNSEMP
GRKPGCVAMRTGIAGGLWDVIKCEEKAKFICKMWAEGVTLPPVPTTTPIPRCPEGWNSNN
HISFCFKPFSRAEHKKTWLESQEFCRSIGGDLASINGKEEQYVIWRSIANNGYYHQNFWI
GLYYLNPDDGFAWSDGSPVRYENWGFGEPNNYQGVELCTEISGDSSMLWNDRHCDYMYGW
ICQIRKGASVKPEPTESPVPEYRTTEDGWIIHEDKQYYFSTETVPMEEGREFCKKNFGDL
SVIESESERKFLWRYILKNGKEDAYFIGLQLSIDQRTSWMDGTPVNYLAWAPHEPNFANN
DENCVVMYKNLGFWNDINCGYPNPYICERHNSSINSTVPPTTFSSPRGCRPAWLSFHNKC
YKIFGSTEEERVTWHAARTACMNLGGNLASIPNEQVQAFLTFHLKDFATETWIGLNDINH
EMRFLWTDGTGVYFTNWAKGFPSGHMGLYAYSGQADCVAMKNKPVKEAGKWADQSCDNSR
GYICQINADSEFLPSTTSSPSNIIRYGNSSYLFIHSKMTWEDARKNCKQNQFDLSSVLDT
YTHSFLWLKILKYGVPVWIGLNSNVTNGHYEWIDNWRMKYTKWAEGEPKQKLGCVYLDIT
GVWKTGFCNESYFSVCKKSDVQAPTEPPQLPGKCPESEGHRSWIPFRGHCYYIESSSSRN
WAQASLECLRLGASLVSVEDSAEANFLTYNLEPLEGKTSTFWTGMYRNVDGLWLWLDGSA
VNFVNWNVGEPSSQQNEHCVEMYADSGYWNNFYCSSYKGYICKKPKIPATEMPSASEMAP
AEIPTMAMTKDEKASTLNHSKTGVIVIVGIIILVGSGLVGYLFYKRRKNCLPTNDSFENN
LYFNGDAVPGISDTKDLVTNIEQNEHATL
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagcttggattaacaccatgaatgtgctttctctcttcactttaacccatgct
ttaaacctacaggagacactagataccagcaccttcttaatatataatgaagatcacaag
cgttgtgtactggctctgagttctaattcagtgactactgctccttgtgttcaagaaaat
gagtcacaaaaattcaggtgggtctcagatcaccagcttatgagcatagcattcaaattg
tgcttgggagtgccttcgaagaaagactgggttccgatcactctgtacccttgtgacaag
gctagtgaacttcagcgatgggaatgcagaaatgagactctctttgcaatccaaggggaa
gatttgtttttcaactatggaaacaaacaggaaaggaatattatgctgtacaagggatct
ggtttatggagtaggtggaaagtctacggaaccacagacgatctgtgttctcgaggctat
gaagatacctacacagtgaaaggaaatgacaatggagccccttgtgtatttccttttaag
tttggtggtaaatggtatgctgactgtacagatgctggcagatcagatggctggttctgg
tgtggaaccacttcggactatgatgttgacaggaagtatggattttgcccaatgaaattt
actaataatgatttatggaacacagaccctttaacaaatgtccagtaccagataaactct
gagacagctctgaaatggcatcaggcaagaaaaagttgtcagcagcagaaggcagagcta
ttgagcatcacagagttacacgaacaaacatacctgacaggtctgactcgcacactgagt
tcagctctctggtttggtctcaacagtttgaatttcaacagtggatggcaatgggctggt
ggtgctccttttcggtacctaaactgggtgccaggccatccttctccagaacctggaaaa
atctgtggtgcattgaatcctggcaaaggtgctaagtgggagaactgggaatgtgataag
aaacttggctatatttgtaaacgaggaaatgctactttagaatctttcattgttcctaaa
gagactaatgtgcctattaggtgtcctgaccaatggatgtcatatgctggtcactgttac
ataattcatagggaccccaaaatatggaaagatgccttaacatcttgcaggaaagaggat
ggagatctggcaagcatccataatgttgaagaatacagctttgttatttctcaacttggg
taccagccatctgatgagctgtggattgggttgaatgacctcaaggttcagatgtatttt
gaatggagtgatggaacacctgtcacctacactaaatggcttcgtggagaacccactcat
gcaaacaacaggcaagaggactgtgtcgttatgaagggaaaggatggattttgggcagac
cattcttgtgaaaagaaaattggctacatctgtaaaaggaaacctatgtcagatgctcct
acagaagaggaaactattgatatgggctgccagagaggctggaaaagacatggtttttat
tgttacttcattggaaatacatttctaacatttcctcaagcaaatcaaacctgtggaagt
catcaggcttttttagcaacagttgaagacagatatgaacaagcctatttgaccagcctg
gttgggctgaaaagagaaagatacttttggattggactttcagatgtagaagaaaaggga
acattcaagtggtgtaatggtgaatctgtcttatttacacactggaattctgaaatgcct
ggaagaaagccaggctgtgttgccatgaggactggaatagcagggggattatgggatgta
ataaaatgtgaagaaaaggcaaagttcatatgcaaaatgtgggcagaaggagtgacactt
ccacctgttcccacaacaactcctattccccggtgtccagaaggctggaactcaaacaat
catattagcttctgtttcaaacctttctccagagcagagcacaagaagacgtggctggaa
tcgcaggagttctgccgatccataggaggagacctggcctccatcaacggcaaagaggag
cagtacgtgatctggcgctccatcgcaaacaatggctattaccatcagaatttctggata
ggtttatattatttgaatcctgatgatggctttgcttggagtgatggatctccagtgagg
tatgaaaactggggctttggagaaccaaataattatcaaggagttgaactttgtacagag
atcagtggtgattccagcatgctttggaatgacaggcactgtgattatatgtatggatgg
atttgccaaataagaaaaggggcaagtgtgaagcctgaaccaacagaatctcctgtaccc
gaatacaggactactgaggatggatggattatacacgaagacaaacagtactatttcagc
acggagactgttcctatggaagagggccgtgagttctgcaaaaagaactttggagacctt
tctgtcattgagagtgaaagtgaaagaaagttcctctggcgatatatattgaaaaatggc
aaagaggatgcatatttcattggtttacaactgagtattgaccaacgtacaagctggatg
gatggcactccagtgaattatttggcatgggcaccacatgaacctaacttcgcaaataat
gatgaaaactgtgtcgttatgtataagaatttaggattttggaatgatataaactgtggc
tatccaaatccctacatatgtgaaaggcacaacagttccattaattcaactgttcctcca
acaacattttcaagtccaagaggatgtcgaccagcttggctttcttttcataacaagtgt
tacaaaatatttggatctacagaagaggaacgtgttacttggcatgctgcacgaacagct
tgcatgaatttaggaggaaacctggcctcgatccctaatgaacaagtgcaagctttcctt
acgttccatttaaaagattttgccactgagacatggattggattaaatgatataaatcat
gaaatgagattcctctggacagatggaacaggggtttactttacaaactgggccaaaggc
ttcccgtcaggacatatgggtttatatgcctatagcggccaggctgattgtgttgccatg
aaaaacaaacctgttaaggaagcagggaagtgggctgatcagagttgtgataacagcaga
ggatatatatgccaaattaatgcagattctgaatttctgccttctacaacctcatcccca
tccaacattatccgttatgggaatagtagttatttgttcatccacagcaaaatgacatgg
gaggatgcacggaaaaactgcaaacaaaatcaatttgacctttccagtgtcttagacacc
tacactcattcattcctgtggctaaagatattaaaatatggggtgcctgtgtggattggt
cttaatagcaatgtgaccaatgggcattatgaatggattgataactggagaatgaagtac
acgaaatgggctgaaggggagccaaagcaaaaactaggctgtgtctatcttgacattact
ggagtctggaagacaggattctgcaacgaaagttacttctctgtttgcaaaaagtctgat
gttcaagctcccactgagccccctcagcttccaggaaagtgtcctgaatcagaaggacac
aggtcttggatccctttccgaggtcattgttactacattgaatcttcctcttcaagaaac
tgggcccaggcatctttagaatgccttcgactaggtgcctctctggtgtcggttgaagac
tcggctgaagccaactttttgacctacaaccttgaaccacttgaagggaaaacatcaaca
ttttggacaggaatgtacagaaatgtggatggactatggctgtggctagatggcagtgca
gtgaattttgtcaactggaatgtaggagagccttcttctcagcaaaatgagcactgcgtt
gaaatgtatgcagattctgggtattggaataatttctattgctcttcctacaaaggatat
atttgtaaaaagccaaaaattccagcaactgaaatgccatcggcatctgaaatggcacca
gctgaaatacctacaatggcaatgacaaaagatgagaaggcttctaccctgaaccacagc
aaaacaggagttatagttattgttggtattatcatcctagttggaagtggccttgtagga
tatctcttctacaaaagaagaaagaattgcttgccaacaaatgacagctttgagaataat
ctgtattttaatggtgatgcagttcctggaattagtgacacaaaggatcttgtgaccaac
atagagcagaatgaacatgcaacactgtaa
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integrated database retrieval system
