Lonchura striata domestica (Bengalese finch): 110478061
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Entry
110478061 CDS
T05897
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110478061 (SCRIB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
110478061
NCBI-ProteinID:
XP_031359987
LinkDB
All DBs
Position
2:complement(151653607..151755289)
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AA seq
1971 aa
AA seq
DB search
MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPSDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEV
SGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTDMTESIGDCENLSELILTEN
MLTALPKSLGKLAKLTNLNVDRNRLTALPAEIGGCANLSVLSLRDNRLALLPPELANTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQ
PSPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKGDDDEESGAERRGLQRRATPHPSEL
KVMKKVIEVRRSEVNAAKADANPSSPNSEEKRLSATSNRSEDSHLSTSTASVDCRLEERE
RGWPNGQLPDLRELQREGKPRAEEEHKEAADQEEEDVEVEYNEPTVHFAEDTLIRSEDED
EDEERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDGVPKEEEELGGCN
NNTEPKDQEEAWDEDDRKNGALSAQPSVKGVSFDQANNLLIEPARIEEEELTLTIVRQTG
GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVSLHCAEHHVA
VEALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPRERRGGLRFPEGPEAAPATE
RFSTCLMRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIAEGGAAHRDGILRVGDRVISIN
GVDMTEARHDQAVALLTTASPTIVLLVEREGAEQPGEGGSPRGRMHSSPPPPGPGDSPPE
ETPVPPRNHLSKGLEDQYPVEEIHLVKAGGPLGLSIVGGSDHSSHPFGIHEPGVFISKVI
PRGLASRSGLRVGDRILEVNGIDLRHATHQEAVNALLSNTQELSMLVRRDPPPPGMQEIC
IEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLQVGMRILEVNH
QSLLGMTHTEAVQVLRGVGDALLVLVCDGFDPKAAAAIEMSPGIIANPFAAGIGRKNSLE
SISSIDRDLSPEELEILQKEMEMVTEATQWEREEMEKVERMRREREAATQQLEEEAENVP
SEPLRLDYRTLAALPSSGLQRGNRAPVECSKPRSGMEGDCAMLSPPTAWHGQEASPDPAA
GTAGPPQLPVPPQQHMSGAEQPRGDQQDPEGCPLSQEQLPETPECLIDSQPIPFSENPFV
VANRRGKAAGTASLGGPPLGYGRGGVLKTSLYSKAPVGESGTGNSRRESPYSPSNLQVPA
APRAPHLAGRETRFASINFITSQDDSKSTKPGVIQPLSRVRPSAAVAHRAEEGDSPNPFQ
QPQPCFRTHSSPKPSPPSPPSPDEVPINVKQAYKTFAAVPLSQPLLGTQELSGQSSTENT
KLASEVAAHSPGGQHSPEQRSFRERQKYFEIEVKQQHLDKPPKRVSLVGEDDLKKMKEEE
ARKLQQQRALLLEEEAEEDEERQVPEAMQSSVIIEGVEYKVERLNGRSSLSPAARPLELS
ENNSSQRNSLEEGIKPEHRTNSMSGLSPADPGAPVRTAKAERRHQERLRMQSPELLGGQD
KELSPAERRALEAEKRAMWRAARSSALEDSVKQYEQDLARRLYQSRQWASAPGARPAHMA
SPVQSHTSRIPGSGGQSRMKSLEQDALKAQMVIAKSKEGKKRSTLEQLAESPSPAPTPSP
TPLEDCSPRNVTSPGRLSMSEKKFDYREFAAIPSSKPVYEIQSPDAADDLRHIDDRSNSV
HREQDGQPEEDTLGTGDPSAAAPSALEDMALYSSKRKLRHSRRSLETAVPT
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatgccgccgctctggcgctgcaaccggcacgtggaggcgctggaccgg
cggcactgctcgctgcaggccgtgcccgaggagatctaccgctacagccgctcgctcgaa
gagctgctgctggacgccaaccagctccgcgagctgcccaagcctttcttcaggcttctg
aacctgcgcaagctgggcctgagcgacaatgagatccagaggcttccccccgaggtggcc
aacttcatgcagctggtggagctggacatctcccgcaacgacattccagaaattcccgaa
agcatcaaattctgcaaatccctggaaatcgcagacttcagtgggaatcctctctccagg
ctgcctgagggcttcacccagctccgaagcctgggccacttggccttgaacgatgtgtcc
ctgcagagcctccccagtgacattgggaatttggcaaacctggtgactttggagctgcgt
gagaacctgctaaagactctccccacttcactctccttccttgtcaagttagagcagttg
gatctcggtggcaatgacctggaagtactgccggacactctgggcgcgctcccgaacctg
cgtgagctgtggctggaccggaaccagctctcggccctgccgccggagctgggcaacctg
cgccgcctggtctgtctggatgtgtctgagaacaagctggagcagctgcccaacgaggtc
agcgggctggtggcactgacggacctgctgctgtcacagaacctgctggagtgcattccc
gatgggattggtcagctgaagcagctctccatcctcaaggtggaccagaaccggctgaca
gacatgacagagtcgattggggactgtgagaatctgtctgagctcatcctgactgagaac
atgctgacggccttgcccaagtccctgggcaagctggccaagctgacgaacctgaacgtg
gaccggaaccggctgacggcgctgccagcagagatcggaggctgtgccaacctcagcgtc
ctgtccctgcgcgacaaccgcctggccctgctgccccccgagctggccaataccaccgag
ctccacgtgctggatgtggctggcaacaggctgcagaacttgccctttgctttgacaaat
cttaatctgaaagccttgtggctggcagaaaaccagtcccagcccatgctgaaattccag
actgaggatgatgagaagacaggagaaaaggttctcacttgctacctgcttccccagcag
ccatctcccagcctggaaaacctcctgcagaacagcgtggatgagagctggacagacacc
aacttaaacagagtcagtgtgatccagttcctggatgagcccaaaggagacgatgatgag
gagtctggagctgagagacggggcctgcagcgccgagccaccccccaccccagtgagctg
aaggtgatgaagaaggtgattgaagtgcggcgcagtgaggtgaatgctgccaaggctgat
gccaaccccagctctcccaactcagaggagaagaggctgagtgccacgtcgaatcgcagt
gaggactcgcacctgtccaccagcacggcctctgtggactgcaggctggaggagagggag
cggggctggcccaacgggcagctgcccgacctgcgggagctgcagagggaggggaagccc
agggcagaggaggagcacaaggaagctgctgaccaggaggaggaagatgtggaagtagaa
tacaatgagcccacggtgcacttcgccgaggacacgctgatacgcagcgaggatgaggat
gaggatgaagagcggccatttccagtggagaagcagaggcttatccgcaaggacacgccc
cattataagaaacacttcaagatcactaaactgcccaagccagaggcagtggtggcactt
ctgcaggggctgaacagtgatggggtccccaaagaggaagaggagttgggaggctgcaat
aataacacagagcccaaagatcaggaggaagcgtgggatgaggatgacagaaagaatgga
gctttgtctgctcagccatccgtgaagggggtgtcgtttgatcaagccaataatctgctg
attgaacctgctcgcattgaggaggaagagctgaccctgaccattgtgcggcagacgggg
gggctgggcatcagcatcgcggggggcaagggctccacgccctacaagggggacgacgag
ggcatctttatttcccgtgtgtctgaggagggtcctgcagctcgggcaggggtccgtgtt
ggtgacaagctcctggaggtgaacggagtgtccctgcactgtgccgagcaccacgtggcc
gtggaggcgctgcggggctcgggcagctccgtgtccatgacagtgctgcgggagcggatg
gtagagcccgagaacgccatcactgtcaccccgctgcggcccgaggatgactacagtccc
cgggagcggcgtggggggctgcgcttccccgagggccccgaggcagccccagccaccgag
aggttctccacctgcctcatgcgcaacgagaagggcctcggcttcagcatcgctggcggc
aagggctctactccctaccgggctggggacacggggatcttcatctcccggatcgcagag
ggcggagcagcccaccgggatgggatcctgcgcgtcggagaccgagtcatctcgatcaat
ggggtagacatgacagaagccaggcatgatcaggccgtagcgctgcttaccacggcctcc
cccaccatcgtgctgctggtagagagagagggcgccgagcagcccggcgagggaggctcg
ccccgcgggcgcatgcactcctccccgccgccccccggccccggggacagcccgcctgag
gagacgccggtgccgcccaggaaccacctgtccaaagggctggaggatcagtaccctgtc
gaggaaattcacctggtgaaagcaggtggtcccctgggcctcagcatcgtgggaggcagt
gaccattccagccatccctttgggattcatgagccaggtgtcttcatctccaaggtcatc
ccgcgagggctggcgtcacgcagcgggctccgcgtcggggacaggattctggaggtgaat
ggcattgacctgcgccacgccacccaccaggaggccgtgaacgctctgctctccaacacc
caggagctctccatgctggtccgcagagacccccctccacctggcatgcaggaaatatgc
attgaaaaagctccaggagagaagctgggcatcagcatccggggtggagccaagggccat
gctggcaatccgttcgatcccactgatgaaggcatcttcatctccaaggtgagctcctca
ggggccgctgcccgggatggccgcctgcaggtggggatgcggatcctggaggtgaaccac
cagagcctgctgggcatgacgcacaccgaggccgtgcaggtgctgcggggtgtgggcgac
gcgctgctcgtgctggtctgcgatggcttcgaccccaaggccgccgctgccatcgagatg
tccccaggaatcattgcaaacccgttcgctgctggcattgggcgcaagaacagcctggag
agcatctcctccattgaccgcgacttgagccccgaggagctggagatcctgcagaaggag
atggaaatggtgacagaagccactcagtgggagagagaagaaatggagaaagtggagcgg
atgcgtagggagcgggaggcagccacgcagcagcttgaggaggaagcagagaatgtcccc
agcgaacccctgcgcctggattaccggaccctggcagcgctgcccagcagtggcctgcag
agaggcaaccgtgctcctgttgagtgctctaagcccagatccggcatggagggtgactgc
gccatgctgtccccacccacagcgtggcacggccaggaagcgtccccagacccggcagca
ggcacggccgggccccctcagctccctgtgcccccccagcagcacatgagcggggcagag
cagccccggggagaccagcaggaccccgaggggtgtcccttgtcccaggagcagctgcca
gagacgccagagtgtttgatcgactcgcagcccatccccttcagtgagaacccctttgtg
gtggccaaccgcaggggtaaggccgcgggcacggccagcctgggggggcctcccctgggc
tatggcagggggggcgtgctgaagaccagcctgtactccaaggctcctgtgggcgagtct
gggacaggaaattccaggcgtgaatccccctattctcccagtaatctgcaggtgcccgca
gccccccgggcccctcacctggccggcagggagacgcgctttgcttccattaatttcatt
acatcgcaggatgacagtaaatcaaccaagcctggcgtcattcagcctctctcccgcgtg
cgaccaagcgctgctgtggcacacagggccgaggagggggacagccccaaccccttccag
cagccccagccctgcttcaggacccacagctctccaaagccatcaccgccgtcaccaccc
tcccctgacgaggtgcccatcaacgtcaagcaggcctacaagacctttgcagcagtgccc
ctgtcccagcccctgctggggacacaggaattgtctgggcagagcagcacagaaaacacc
aaactggcctcggaggtggccgcacacagccctgggggacagcacagccctgagcaaagg
tccttccgtgaaaggcagaagtattttgagattgaggtgaagcagcagcacctggacaag
cctcccaagcgtgtgtccttggtgggggaggatgacctgaagaaaatgaaagaggaggag
gcccgcaagctgcagcagcagcgagcccttctgctggaggaggaagctgaggaggatgag
gagaggcaggtgcctgaggccatgcagtccagcgtcatcatcgagggcgtggagtacaag
gtggagaggctgaatggaaggagcagcctgtctccagcagctcggcccttggagctcagt
gagaacaacagctcacagaggaattccctggaggaggggatcaagcctgagcacagaacc
aactccatgtcggggctgagcccggcggaccccggcgctcccgtgcgcacagccaaggcc
gagcggcggcaccaggagcggctgcggatgcagagccccgagctgctgggcgggcaggac
aaggagctgtccccggcagaacgccgggccctggaggccgagaaacgcgccatgtggagg
gcagcacgatcctcagctcttgaagacagtgttaaacagtacgagcaggacctggccagg
aggctgtaccagtcccggcagtgggcttctgctcccggggccaggccagctcacatggct
agcccagtgcagagccacacctcgagaatccctgggtcaggaggccaatccaggatgaaa
tccctggagcaggacgctctcaaagcccagatggtcattgccaagtccaaggaggggaag
aagcgcagcacgctggagcagctggcagagtccccctcacctgcaccgacgccgtcgccg
acgccgctggaagattgcagccccaggaacgtcacttcccctggaagactgtcaatgtct
gaaaagaagtttgactaccgggaatttgctgctattccttcctccaaacctgtttacgaa
atccagtcccctgatgcagctgatgacctcagacacatcgatgaccggagtaactcagtt
caccgggagcaggacgggcagccagaggaggacacactgggaacaggggatccatcagca
gcagctccctcagccctggaggacatggccctgtacagcagcaagcggaagctccggcac
agccggcgaagcctggagaccgctgtccccacatag
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integrated database retrieval system
