KEGG   Lonchura striata domestica (Bengalese finch): 110481928
Entry
110481928         CDS       T05897                                 
Symbol
GPATCH1
Name
(RefSeq) G patch domain-containing protein 1 isoform X1
  KO
K13123  G patch domain-containing protein 1
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsr03041]
    110481928 (GPATCH1)
Spliceosome [BR:lsr03041]
 Complex C
  Other components
   Complex C specific factors
    110481928 (GPATCH1)
SSDB
Motif
Pfam: DUF1604 G-patch G-patch_2
Other DBs
NCBI-GeneID: 110481928
NCBI-ProteinID: XP_021406471
LinkDB
Position
11:19660043..19674774
AA seq 936 aa
MAAESSDSEEEDLVSYGSALQPLQEGERIKKPVPLQEQTVKDAKGRYQRFHGAFTGGFSA
GYFNTVGTKEGWTPSAFVSSRQKRAGKTVLGPEDFMDEEDLSEFGIAPKDITTTDDFASK
AKDRIKEKARQIAGVVAPIPGTTAFDDLIGPSKITVGVELLRKMGWKEGQGIGPRVKRKP
RRQQPDPTVKIYGCALPPGLSEGSEDEEDEYQPENVTFAPKDVMPVDLTPKENVHGLGYK
GLDPSQALFGASGREHLNLFTGGSEETSNLLGDLRHSKGRKLGITGQAFGVGALEEEDDD
IYATDTLSKYDTVLKDEEPGDGLYGWTAPKQYKSKKRPEREFKYIGKVLPGFSLASKPSA
PIKIYPPPSLPRNYRPVHYFRPVITAGNESCHLQKALEESTGKLESDPTQQGRHALNAAQ
RREQLGETELKGPAPSVLEYLSEKDRERLKEVKQASEQQMKAKIVSQQSANSRFQVASPE
EAAHKWQMLLGGQLANAGSSDFKPFAKNPEKQKRYENFVKSLKQGEKGERLERFFDQNMT
EWERGREQEEFFRAAMFYRSSNSTLASRFTRAKYEDDVDKVEVPRDQENDIDDKETAVKM
KMFGKLTRDNFEWHPDKLLCKRFNVRDPYPDSSIVGLPKVKRDKYSVFNFLTVPEPTTSV
TQATNEKIQESNSLTKPKKSSRWDVSDKEKEKKDSISEFISLARSKADVQQQPPVPAKEE
CGAGTTETPPTVQVADEDKNQEEESGRPPMDLFKAIFVSSSDEKSSSSEEESDEEQQPTT
SERQSETTKQVDIADCSSSNLQENVTASTDSGISSLPTSKQELDATEEFGPKLPPAFSSG
TTWQQQTEVPATFPGPSRKEKHRKTRERHKTKKERKRKKEKKKKHKKQKNKGKHKNKKAE
KDSSSDTTDSSDSLSDMDTTGLSPKELLRRLKQLQY
NT seq 2811 nt   +upstreamnt  +downstreamnt
atggcggcggagagcagcgacagcgaggaggaggacttggtgagctatggaagcgcgctg
cagccgctgcaggagggtgaacgaattaaaaagccagtccctcttcaagagcagactgtt
aaagatgcaaagggacgataccagcgtttccatggtgcatttactggtggcttttctgcc
ggctactttaacactgttggtacaaaggaaggatggacaccatcagcttttgtatcatca
cggcagaagagagcaggtaaaaccgttcttggaccagaagacttcatggatgaagaggat
cttagtgaatttgggattgcaccaaaagatattacaactacagatgattttgcatctaaa
gctaaagacaggataaaagagaaagccaggcagattgcaggagtggttgctcccattcca
ggaaccactgcatttgatgatttaattggaccatctaaaataacagttggggttgaactg
ttaaggaaaatgggctggaaagaaggacaaggaattggaccacgagtcaaaagaaagcca
cggagacagcaacctgatcctacagtgaagatatatggttgtgcattaccacctggactg
tctgagggttctgaggatgaagaggatgaataccagccagagaatgtgacatttgcaccg
aaagatgtaatgcctgtagacttgactcccaaagagaatgtccatggacttggctataag
ggtttggacccctcacaagctttgtttggtgcgtctggaagagaacacctgaatcttttc
actggtggttctgaagaaacaagcaatttacttggtgatctgagacatagtaaagggaga
aaactaggtattacaggtcaggcttttggtgtaggagctttagaggaagaagatgatgat
atttatgcaactgacacactgtcaaaatatgatacagttctaaaggatgaggagcctggg
gatggcttgtatggctggacagcaccaaaacagtataaatccaaaaaaaggcctgaaaga
gaatttaaatatattggcaaagtcctgcctggcttttccttggcatcaaaaccatcagct
ccaatcaagatttacccaccacctagcctgccacgaaattacagaccagtccattacttc
cgacctgtgataacagctgggaatgaaagctgccatttacagaaggccttggaggagtca
actgggaaactggagagtgatccaacacagcaaggcaggcatgctttgaatgcagctcag
aggagggaacagctaggagagactgagctgaaaggtccggctccttctgttttggaatat
ctgtctgagaaagatcgagaaagactcaaagaagtgaaacaagcatctgaacaacaaatg
aaagcaaaaatagtgtctcagcagtcagcaaatagcagattccaagtggcctccccagaa
gaagctgctcacaaatggcagatgctgctgggggggcagttagcaaatgctggttctagt
gacttcaaaccatttgcaaaaaatccagaaaaacaaaagagatacgaaaattttgtgaaa
agtcttaaacaaggagaaaaaggagaaagattggagcgtttttttgaccagaacatgaca
gagtgggagcgaggcagggagcaggaggagttcttccgtgcagccatgttctacagatcc
tccaattcaacactggcctccaggttcacccgcgccaaatacgaagatgatgttgacaaa
gttgaggttcctcgagaccaagagaatgatattgatgataaggaaacagctgtgaagatg
aagatgtttggcaaactcacaagagataattttgaatggcatcctgataaactgctgtgt
aaaagatttaatgttcgtgatccatatcctgattcttctatagtgggtttgccaaaagtg
aaacgagacaagtattctgtttttaatttcttaactgtgcctgagcccaccacatctgta
actcaagcaacaaatgaaaagatccaagagagtaacagtctcactaaaccaaagaaatct
tcaaggtgggatgtgtcagataaagagaaggagaagaaagattctatcagtgaattcatt
agtcttgctagatcaaaagctgatgttcagcagcagcccccagtgccagcaaaagaagaa
tgtggagctgggacgactgaaactcctcccactgtgcaggtagctgatgaagataagaat
caggaggaagaaagcggacgaccacccatggacttatttaaggccatctttgtgagctcc
tcagatgaaaaatcatcttcctctgaagaagagagtgatgaagaacagcaaccaactact
tctgaaagacagtcagaaaccaccaaacaagttgatatagcagactgttcttcctctaat
ttacaagagaatgtgactgcttcaactgattctggcatttcttcattgcctacgtcaaag
caggaactggatgcaacagaggaatttggaccaaagttgccaccagctttttcttctggc
actacttggcaacaacaaacagaggtgccagcaacttttcctgggcctagtaggaaagaa
aaacataggaaaaccagagagaggcacaagactaagaaagaacgcaaacgaaaaaaggaa
aagaaaaagaagcataagaagcagaaaaacaaaggaaaacacaagaataaaaaagcagaa
aaagacagcagctcagacactacagacagcagtgatagccttagtgatatggataccaca
ggcttgtcacctaaagaacttctaagaagattaaaacaacttcagtattga

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