Lonchura striata domestica (Bengalese finch): 110482317
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Entry
110482317 CDS
T05897
Symbol
ABCF1
Name
(RefSeq) ATP-binding cassette sub-family F member 1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lsr03012
]
110482317 (ABCF1)
Translation factors [BR:
lsr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110482317 (ABCF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
AAA_16
AAA_29
AAA_19
NACHT
AAA_28
AAA_30
AAA_14
AAA
AAA_22
AAA_15
AAA_5
RsgA_GTPase
ABC_tran_Xtn
NB-ARC
AAA_18
AAA_25
RNA_helicase
MMR_HSR1
AAA_24
nSTAND3
ATPase_2
cobW
SRP54
Mg_chelatase
DUF3987
NTF3_N
AAA_33
DUF6127
YqjK
Motif
Other DBs
NCBI-GeneID:
110482317
NCBI-ProteinID:
XP_031363571
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MKKQAEFERQVASLRAAAASGDGDFAVSQAELSSRQAMLENASDIKLYGLVGPNGKGKTT
LLKHIANRALNIPPNIDVLLCEQEVHADDTPAVHAVLRADTQRLRLLEEERHLQRLLDSG
DDSAAQRLEKVYEELRAIGAAAAEAKARRILAGLGFTPEMQNRPTRKFSGGWRMRVSLAR
ALFLEPTLLLLDEPTNHLDLNAVIWLNNYLQGWKKTLLVVSHDQGFLDDVCTDIIHLDSQ
RLHYYRGNYMTFKKMYQQKQKELMKQFEKQEKKLRDLKAGGKSTKQAEKQTKEALTRKQQ
KCRRRAPAEAAAEAPELLRRPREYSVRFTFPDPPPLSPPVLGLHGVDFGYEGQELLFRNL
DFGIDMESRVCIVGPNGVGKSTLLQLLTGALTPLRGQMRRNHRLKVGFFNQQAAEQLRLE
ETAAEFLQRSFNLAHQEARRCLGRFGLEGHAHTLQMAKLSGGQKARVVFAELACRQPDVL
ILDEPTNNLDIESIDALADAINDYKGAVIVVSHDARLITETGCQLWVVEEQGLSQIDGDF
HDYKREVLEALGEVVAARPRD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcaggcggagtttgagcggcaggtggcgtcgctgcgcgcggccgccgcctcg
ggggacggcgacttcgccgtgtcgcaggccgagctgtcctcgcggcaggccatgctggag
aacgcctccgacatcaagctctacggcctcgtggggcccaacgggaaggggaagacgacg
ctgctgaagcacatcgccaaccgcgccctcaacatcccgcccaacatcgacgtgctgctc
tgcgagcaagaggtacacgcagacgacacgccggccgtccacgcggtgctccgggcagac
acgcagcgcctgcggctgctggaggaggagcggcacctgcagcggctgctggacagcggc
gacgacagcgccgcccagaggctggagaaggtgtacgaggagctgcgcgccatcggcgcc
gccgccgccgaggccaaagcgcggcggatcctggccgggctcggcttcacccccgagatg
cagaaccggcccaccaggaagttctcggggggctggaggatgcgcgtgtccctggccagg
gcgctgttcctggagccgacgctgctgctgctggacgagcccacgaaccacctggacctg
aacgccgtcatctggctcaacaactacctgcagggctggaagaagacgctgctggtggtg
tcccacgaccaggggttcctggacgacgtctgcaccgacatcatccacctggactcgcag
cgcctgcactactacagagggaactacatgaccttcaagaagatgtaccagcagaagcag
aaggagctgatgaagcagttcgagaagcaggagaagaaactgcgggacctcaaagccggc
ggcaaatccaccaagcaggcggagaagcagacgaaggaggcgctgacccgcaagcagcag
aagtgccggcgccgcgctccggccgaggcggcggccgaggctccggagctgctgcgccgg
ccccgggaatattccgtgcgcttcaccttccccgacccgccgccgctcagcccgcccgtg
ctcggcctgcacggcgtggatttcggctacgagggccaggagctgctgttccgcaacctg
gacttcggcatcgacatggaatcccgagtttgcatcgtgggccccaacggggtcgggaag
agcaccctgctgcagctgctcaccggggcgctgacgccgctccgggggcagatgaggaga
aaccatcggctgaaggtggggttctttaaccagcaggcggccgagcagctgcgcctggag
gagacggcggccgagttcctgcagcgcagcttcaacctggcgcaccaggaggcgcggcgc
tgcctcggccgcttcggcctcgagggccacgcccacacgctgcagatggccaagctctcg
ggcggccagaaggcgcgcgtggtgtttgccgagctggcgtgccgccagcccgacgtgctc
atcctggacgagcccaccaacaacctggacatcgagtccatcgacgccttggccgacgcc
atcaacgactacaaaggagcggtgatcgtggtgagccacgacgcgcggctgatcaccgag
accggctgccagctgtgggtggtggaggagcagggcctgagccagatcgacggcgacttc
cacgactacaaacgcgaggtgctggaggccctgggcgaggtggtggcggcgcggccgcgc
gactga
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